RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 ATP6V0E1O15342 81 aa13.67□□□□□ -0.22
PTPA-223ENST00000452489 HOXD3P31249 432 aaPredicted RBP13.67□□□□□ -0.22
PTPA-223ENST00000452489 APRG1Q8IVJ8 170 aa13.67□□□□□ -0.22
PTPA-223ENST00000452489 Q8N6K4 173 aa13.67□□□□□ -0.22
PTPA-223ENST00000452489 LY6G5BQ8NDX9 201 aa13.67□□□□□ -0.22
PTPA-223ENST00000452489 ZNF625Q96I27 306 aaPredicted RBP13.67□□□□□ -0.22
PTPA-223ENST00000452489 DNAL4O96015 105 aa13.66□□□□□ -0.22
PTPA-223ENST00000452489 LINC00846Q9NV44 126 aa13.66□□□□□ -0.22
PTPA-223ENST00000452489 FAM223BA6NKX1 122 aa13.66□□□□□ -0.22
PTPA-223ENST00000452489 FAM222AQ5U5X8 452 aa13.66□□□□□ -0.22
PTPA-223ENST00000452489 C14orf132Q9NPU4 83 aa13.66□□□□□ -0.22
PTPA-223ENST00000452489 PRO0628Q9UI54 55 aa13.66□□□□□ -0.22
PTPA-223ENST00000452489 SOCS3O14543 225 aa13.65□□□□□ -0.22
PTPA-223ENST00000452489 TIMM17BO60830 172 aa13.65□□□□□ -0.22
PTPA-223ENST00000452489 PRIMA1Q86XR5 153 aa13.65□□□□□ -0.22
PTPA-223ENST00000452489 FAM223AQ8IWN6 122 aa13.65□□□□□ -0.22
PTPA-223ENST00000452489 C1orf43Q9BWL3 253 aa13.65□□□□□ -0.22
PTPA-223ENST00000452489 PCNX1Q96RV3 2341 aa13.65□□□□□ -0.22
PTPA-223ENST00000452489 SOSTDC1Q6X4U4 206 aa13.65□□□□□ -0.22
PTPA-223ENST00000452489 Q6JHZ5 121 aa13.64□□□□□ -0.23
PTPA-223ENST00000452489 Q8N9W7 124 aa13.64□□□□□ -0.23
PTPA-223ENST00000452489 ATMQ13315 3056 aa13.63□□□□□ -0.23
PTPA-223ENST00000452489 ODF3BA8MYP8 253 aa13.63□□□□□ -0.23
PTPA-223ENST00000452489 E7EQL1 145 aa13.63□□□□□ -0.23
PTPA-223ENST00000452489 UNQ9165/PRO28630Q6UXU0 137 aa13.63□□□□□ -0.23
PTPA-223ENST00000452489 MED13LQ71F56 2210 aa13.63□□□□□ -0.23
PTPA-223ENST00000452489 GPR179Q6PRD1 2367 aa13.62□□□□□ -0.23
PTPA-223ENST00000452489 TINCRA0A1B0GVN0 87 aa13.61□□□□□ -0.23
PTPA-223ENST00000452489 IGHG2P01859 326 aa13.61□□□□□ -0.23
PTPA-223ENST00000452489 RPL35AP18077 110 aaKnown RBP13.61□□□□□ -0.23
PTPA-223ENST00000452489 IGFL2Q6UWQ7 119 aa13.61□□□□□ -0.23
PTPA-223ENST00000452489 PKIGQ9Y2B9 76 aa13.61□□□□□ -0.23
PTPA-223ENST00000452489 LRBAP50851 2863 aa13.61□□□□□ -0.23
PTPA-223ENST00000452489 ZDBF2Q9HCK1 2354 aa13.61□□□□□ -0.23
PTPA-223ENST00000452489 NDUFA1O15239 70 aa13.6□□□□□ -0.23
PTPA-223ENST00000452489 HILS1P60008 231 aa13.6□□□□□ -0.23
PTPA-223ENST00000452489 CDKN2A-AS1Q9UH64 79 aa13.6□□□□□ -0.23
PTPA-223ENST00000452489 TRIOBPQ9H2D6 2365 aa13.6□□□□□ -0.23
PTPA-223ENST00000452489 KLLNB2CW77 178 aa13.59□□□□□ -0.23
PTPA-223ENST00000452489 CIRBPQ14011 172 aaKnown RBP13.59□□□□□ -0.23
PTPA-223ENST00000452489 KLK9Q9UKQ9 250 aa13.59□□□□□ -0.23
PTPA-223ENST00000452489 Q9H8V8 135 aa13.59□□□□□ -0.23
PTPA-223ENST00000452489 MAP1BP46821 2468 aaKnown RBP13.58□□□□□ -0.23
PTPA-223ENST00000452489 IGHV3-16A0A0C4DH30 117 aa13.58□□□□□ -0.24
PTPA-223ENST00000452489 F8WDY8 70 aa13.58□□□□□ -0.24
PTPA-223ENST00000452489 LY6HO94772 140 aa13.57□□□□□ -0.24
PTPA-223ENST00000452489 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.57□□□□□ -0.24
PTPA-223ENST00000452489 C9orf85Q96MD7 179 aa13.57□□□□□ -0.24
PTPA-223ENST00000452489 TMEM243Q9BU79 118 aa13.57□□□□□ -0.24
PTPA-223ENST00000452489 UBE2D4Q9Y2X8 147 aa13.57□□□□□ -0.24
PTPA-223ENST00000452489 TECTAO75443 2155 aa13.57□□□□□ -0.24
PTPA-223ENST00000452489 TRBV12-3P01733 135 aa13.57□□□□□ -0.24
PTPA-223ENST00000452489 PRORYQ9H606 182 aa13.57□□□□□ -0.24
PTPA-223ENST00000452489 IGHV3-73A0A0B4J1V6 119 aa13.56□□□□□ -0.24
PTPA-223ENST00000452489 SPTBN2O15020 2390 aa13.56□□□□□ -0.24
PTPA-223ENST00000452489 WFDC9Q8NEX5 89 aa13.56□□□□□ -0.24
PTPA-223ENST00000452489 GHRHP01286 108 aa13.55□□□□□ -0.24
PTPA-223ENST00000452489 ZFHX3Q15911 3703 aa13.55□□□□□ -0.24
PTPA-223ENST00000452489 TRAV12-2A0A075B6T6 113 aa13.55□□□□□ -0.24
PTPA-223ENST00000452489 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.54□□□□□ -0.24
PTPA-223ENST00000452489 FAM236DA0A1B0GTK5 79 aa13.54□□□□□ -0.24
PTPA-223ENST00000452489 IGKV2-29A2NJV5 120 aaPredicted RBP13.54□□□□□ -0.24
PTPA-223ENST00000452489 FAM236CP0DP71 79 aa13.54□□□□□ -0.24
PTPA-223ENST00000452489 RPL28P46779 137 aaKnown RBP13.54□□□□□ -0.24
PTPA-223ENST00000452489 PROK1P58294 105 aa13.54□□□□□ -0.24
PTPA-223ENST00000452489 MINOS1Q5TGZ0 78 aa13.54□□□□□ -0.24
PTPA-223ENST00000452489 C20orf197Q8N268 126 aa13.54□□□□□ -0.24
PTPA-223ENST00000452489 NDUFC2O95298 119 aa13.54□□□□□ -0.24
PTPA-223ENST00000452489 Q9UF83 564 aa13.54□□□□□ -0.24
PTPA-223ENST00000452489 NCOR1O75376 2440 aa13.53□□□□□ -0.24
PTPA-223ENST00000452489 A0A087WYN8 130 aa13.53□□□□□ -0.24
PTPA-223ENST00000452489 KLK9Q2XQG4 91 aa13.53□□□□□ -0.24
PTPA-223ENST00000452489 PIMREGQ9BSJ6 248 aa13.53□□□□□ -0.24
PTPA-223ENST00000452489 CACNA1HO95180 2353 aa13.53□□□□□ -0.24
PTPA-223ENST00000452489 TRAV23DV6A0A075B6W5 121 aa13.53□□□□□ -0.24
PTPA-223ENST00000452489 PIK3CD-AS1Q5SR53 167 aa13.53□□□□□ -0.24
PTPA-223ENST00000452489 NDUFC2-KCTD14E9PQ53 114 aa13.52□□□□□ -0.25
PTPA-223ENST00000452489 DEFB109BQ30KR1 87 aa13.52□□□□□ -0.25
PTPA-223ENST00000452489 IGKV3-20P01619 116 aa13.51□□□□□ -0.25
PTPA-223ENST00000452489 COX6A2Q02221 97 aa13.51□□□□□ -0.25
PTPA-223ENST00000452489 ARRDC1-AS1Q9H2J1 176 aa13.51□□□□□ -0.25
PTPA-223ENST00000452489 NCR3O14931 201 aa13.51□□□□□ -0.25
PTPA-223ENST00000452489 ASH1LQ9NR48 2969 aaKnown RBP13.51□□□□□ -0.25
PTPA-223ENST00000452489 ZNF415Q09FC8 603 aa13.5□□□□□ -0.25
PTPA-223ENST00000452489 HIST2H2BCQ6DN03 193 aa13.5□□□□□ -0.25
PTPA-223ENST00000452489 HIST2H2BDQ6DRA6 164 aa13.5□□□□□ -0.25
PTPA-223ENST00000452489 TMEM86BQ8N661 226 aa13.5□□□□□ -0.25
PTPA-223ENST00000452489 WFDC11Q8NEX6 87 aa13.5□□□□□ -0.25
PTPA-223ENST00000452489 PIEZO2Q9H5I5 2752 aa13.5□□□□□ -0.25
PTPA-223ENST00000452489 EPM2AB3EWF7 344 aa13.5□□□□□ -0.25
PTPA-223ENST00000452489 RBMY1BA6NDE4 496 aaKnown RBP13.49□□□□□ -0.25
PTPA-223ENST00000452489 RBMY1EA6NEQ0 496 aaKnown RBP13.49□□□□□ -0.25
PTPA-223ENST00000452489 AVPP01185 164 aa13.49□□□□□ -0.25
PTPA-223ENST00000452489 RBMY1DP0C7P1 496 aaKnown RBP13.49□□□□□ -0.25
PTPA-223ENST00000452489 RBMY1A1P0DJD3 496 aaKnown RBP13.49□□□□□ -0.25
PTPA-223ENST00000452489 RBMY1CP0DJD4 496 aa13.49□□□□□ -0.25
PTPA-223ENST00000452489 RBMY1FQ15415 496 aaKnown RBP13.49□□□□□ -0.25
PTPA-223ENST00000452489 CHCHD7Q9BUK0 85 aa13.49□□□□□ -0.25
PTPA-223ENST00000452489 PTPRQQ9UMZ3 2332 aa13.49□□□□□ -0.25
PTPA-223ENST00000452489 CUL9Q8IWT3 2517 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms