RNA–Protein interactions for RNA: ENST00000450931.5

PMS1-217, Transcript of PMS1 homolog 1, mismatch repair system component, human

TSL 2

Gene PMS1, Length 2,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PMS1-217	ENST00000450931	IGHV1-58	A0A0C4DH39	117 aa		4.05	□□□□□ -1.76
PMS1-217	ENST00000450931	DEFA1	P59665	94 aa		4.05	□□□□□ -1.76
PMS1-217	ENST00000450931	DEFA3	P59666	94 aa		4.05	□□□□□ -1.76
PMS1-217	ENST00000450931	HIGD2B	Q4VC39	106 aa		4.05	□□□□□ -1.76
PMS1-217	ENST00000450931	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	4.05	□□□□□ -1.76
PMS1-217	ENST00000450931	CARD19	Q96LW7	228 aa		4.05	□□□□□ -1.76
PMS1-217	ENST00000450931	MGP	P08493	103 aa		4.04	□□□□□ -1.76
PMS1-217	ENST00000450931	TRGC1	P0CF51	173 aa		4.04	□□□□□ -1.76
PMS1-217	ENST00000450931	IGLC6	P0CF74	106 aa		4.04	□□□□□ -1.76
PMS1-217	ENST00000450931	RAB5C	P51148	216 aa		4.04	□□□□□ -1.76
PMS1-217	ENST00000450931	INO80E	Q8NBZ0	244 aa	Predicted RBP	4.04	□□□□□ -1.76
PMS1-217	ENST00000450931	ZNF25	P17030	456 aa	Predicted RBP	4.04	□□□□□ -1.76
PMS1-217	ENST00000450931	NKX2-5	P52952	324 aa	Predicted RBP	4.04	□□□□□ -1.76
PMS1-217	ENST00000450931	FOXI1	Q12951	378 aa		4.04	□□□□□ -1.76
PMS1-217	ENST00000450931	RPL7L1	Q6DKI1	246 aa	Known RBP	4.04	□□□□□ -1.76
PMS1-217	ENST00000450931	FAM210A	Q96ND0	272 aa		4.04	□□□□□ -1.76
PMS1-217	ENST00000450931	PFDN1	O60925	122 aa		4.03	□□□□□ -1.76
PMS1-217	ENST00000450931	CST9LP1	Q5W188	147 aa		4.03	□□□□□ -1.76
PMS1-217	ENST00000450931	BAGE2	Q86Y30	109 aa		4.03	□□□□□ -1.76
PMS1-217	ENST00000450931	ISOC2	Q96AB3	205 aa		4.03	□□□□□ -1.76
PMS1-217	ENST00000450931	IGLV1-50	A0A075B6I6	118 aa		4.03	□□□□□ -1.76
PMS1-217	ENST00000450931	LOC107984640	A0A0U1RRK4	108 aa		4.03	□□□□□ -1.76
PMS1-217	ENST00000450931		F2Z2F3	143 aa		4.03	□□□□□ -1.76
PMS1-217	ENST00000450931	PTTG1IP	P53801	180 aa		4.03	□□□□□ -1.76
PMS1-217	ENST00000450931	AMMECR1L	Q6DCA0	310 aa		4.03	□□□□□ -1.76
PMS1-217	ENST00000450931	FER1L6-AS1	Q8NA97	138 aa		4.03	□□□□□ -1.76
PMS1-217	ENST00000450931	OR5A1	Q8NGJ0	315 aa		4.03	□□□□□ -1.76
PMS1-217	ENST00000450931	IFITM3	Q01628	133 aa		4.03	□□□□□ -1.76
PMS1-217	ENST00000450931	TSKU	Q8WUA8	353 aa		4.03	□□□□□ -1.76
PMS1-217	ENST00000450931	DIRC1	Q969H9	104 aa		4.03	□□□□□ -1.76
PMS1-217	ENST00000450931	SMIM12	Q96EX1	92 aa		4.03	□□□□□ -1.76
PMS1-217	ENST00000450931	XKRY2	A2RUG3	117 aa		4.02	□□□□□ -1.77
PMS1-217	ENST00000450931	SYCN	Q0VAF6	134 aa		4.02	□□□□□ -1.77
PMS1-217	ENST00000450931	MUC21	A0A140T8X8	626 aa		4.02	□□□□□ -1.77
PMS1-217	ENST00000450931	PAGE4	O60829	102 aa		4.02	□□□□□ -1.77
PMS1-217	ENST00000450931	MT-ND6	P03923	174 aa		4.02	□□□□□ -1.77
PMS1-217	ENST00000450931	GIP	P09681	153 aa	Predicted RBP	4.02	□□□□□ -1.77
PMS1-217	ENST00000450931	SCO2	A0A1W2PP80	73 aa		4.01	□□□□□ -1.77
PMS1-217	ENST00000450931	ZNF561-AS1	K7EIQ3	104 aa		4.01	□□□□□ -1.77
PMS1-217	ENST00000450931	FGF6	P10767	208 aa		4.01	□□□□□ -1.77
PMS1-217	ENST00000450931	NTF3	P20783	257 aa		4.01	□□□□□ -1.77
PMS1-217	ENST00000450931	MBD3L1	Q8WWY6	194 aa		4.01	□□□□□ -1.77
PMS1-217	ENST00000450931	LPA	P08519	4548 aa		4.01	□□□□□ -1.77
PMS1-217	ENST00000450931	APCS	P02743	223 aa		4.01	□□□□□ -1.77
PMS1-217	ENST00000450931	CAMP	P49913	170 aa		4.01	□□□□□ -1.77
PMS1-217	ENST00000450931	LCE2A	Q5TA79	106 aa	Predicted RBP	4.01	□□□□□ -1.77
PMS1-217	ENST00000450931	ALG5	Q9Y673	324 aa		4.01	□□□□□ -1.77
PMS1-217	ENST00000450931	IGLV4-69	A0A075B6H9	119 aa		4	□□□□□ -1.77
PMS1-217	ENST00000450931	IGKV3OR2-268	A0A0C4DH90	116 aa		4	□□□□□ -1.77
PMS1-217	ENST00000450931	C19orf71	A6NCJ1	209 aa		4	□□□□□ -1.77
PMS1-217	ENST00000450931	CCL25	O15444	150 aa		4	□□□□□ -1.77
PMS1-217	ENST00000450931	RPL13A	P40429	203 aa	Known RBP	4	□□□□□ -1.77
PMS1-217	ENST00000450931	C11orf52	Q96A22	123 aa		4	□□□□□ -1.77
PMS1-217	ENST00000450931	TMEM101	Q96IK0	257 aa		4	□□□□□ -1.77
PMS1-217	ENST00000450931	LINC00959	A0A1B0GUT2	108 aa		4	□□□□□ -1.77
PMS1-217	ENST00000450931	UMAD1	C9J7I0	102 aa		4	□□□□□ -1.77
PMS1-217	ENST00000450931		H0Y9J4	135 aa		4	□□□□□ -1.77
PMS1-217	ENST00000450931	IGLV7-43	P04211	117 aa		4	□□□□□ -1.77
PMS1-217	ENST00000450931	CTRL	P40313	264 aa		4	□□□□□ -1.77
PMS1-217	ENST00000450931	SS18	Q15532	418 aa		4	□□□□□ -1.77
PMS1-217	ENST00000450931	RNF151	Q2KHN1	245 aa		4	□□□□□ -1.77
PMS1-217	ENST00000450931	CD164L2	Q6UWJ8	174 aa		4	□□□□□ -1.77
PMS1-217	ENST00000450931	TMUB2	Q71RG4	321 aa		4	□□□□□ -1.77
PMS1-217	ENST00000450931	BTF3L4	Q96K17	158 aa		4	□□□□□ -1.77
PMS1-217	ENST00000450931	CNFN	Q9BYD5	112 aa		4	□□□□□ -1.77
PMS1-217	ENST00000450931	BIN3	Q9NQY0	253 aa		4	□□□□□ -1.77
PMS1-217	ENST00000450931	EIF5A	P63241	154 aa	Known RBP	3.99	□□□□□ -1.77
PMS1-217	ENST00000450931	C1orf137	Q5JT78	98 aa		3.99	□□□□□ -1.77
PMS1-217	ENST00000450931	EIF5AL1	Q6IS14	154 aa	Known RBP	3.99	□□□□□ -1.77
PMS1-217	ENST00000450931	RNASEK	Q6P5S7	137 aa	Known RBP	3.99	□□□□□ -1.77
PMS1-217	ENST00000450931	TEX261	Q6UWH6	196 aa		3.99	□□□□□ -1.77
PMS1-217	ENST00000450931	PRR26	Q8N8Z3	221 aa		3.99	□□□□□ -1.77
PMS1-217	ENST00000450931	OR2D3	Q8NGH3	330 aa		3.99	□□□□□ -1.77
PMS1-217	ENST00000450931	C2orf48	Q96LS8	159 aa		3.99	□□□□□ -1.77
PMS1-217	ENST00000450931	TPPP3	Q9BW30	176 aa		3.99	□□□□□ -1.77
PMS1-217	ENST00000450931		F8WDY8	70 aa		3.99	□□□□□ -1.77
PMS1-217	ENST00000450931	APOM	O95445	188 aa		3.99	□□□□□ -1.77
PMS1-217	ENST00000450931	RPL35	P42766	123 aa	Known RBP	3.99	□□□□□ -1.77
PMS1-217	ENST00000450931	XCL1	P47992	114 aa		3.99	□□□□□ -1.77
PMS1-217	ENST00000450931	SST	P61278	116 aa		3.99	□□□□□ -1.77
PMS1-217	ENST00000450931	GAGE2B	Q13066	116 aa		3.99	□□□□□ -1.77
PMS1-217	ENST00000450931		Q6ZNX1	250 aa		3.99	□□□□□ -1.77
PMS1-217	ENST00000450931	NUP35	Q8NFH5	326 aa		3.99	□□□□□ -1.77
PMS1-217	ENST00000450931	CARHSP1	Q9Y2V2	147 aa	Known RBP	3.99	□□□□□ -1.77
PMS1-217	ENST00000450931		A0A1W2PNN7	141 aa		3.99	□□□□□ -1.77
PMS1-217	ENST00000450931	MRPL52	Q86TS9	123 aa	Known RBP	3.99	□□□□□ -1.77
PMS1-217	ENST00000450931	C9orf62	Q8N4C0	152 aa		3.99	□□□□□ -1.77
PMS1-217	ENST00000450931	MANBAL	Q9NQG1	85 aa		3.99	□□□□□ -1.77
PMS1-217	ENST00000450931	CYTL1	Q9NRR1	136 aa		3.99	□□□□□ -1.77
PMS1-217	ENST00000450931	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	3.98	□□□□□ -1.77
PMS1-217	ENST00000450931	FXYD6-FXYD2	A0A087WZ82	144 aa		3.98	□□□□□ -1.77
PMS1-217	ENST00000450931	TRBV6-5	A0A0K0K1A5	114 aa		3.98	□□□□□ -1.77
PMS1-217	ENST00000450931	IGKV2-29	A2NJV5	120 aa	Predicted RBP	3.98	□□□□□ -1.77
PMS1-217	ENST00000450931	C9orf116	Q5BN46	136 aa	Predicted RBP	3.98	□□□□□ -1.77
PMS1-217	ENST00000450931	KCNRG	Q8N5I3	272 aa		3.98	□□□□□ -1.77
PMS1-217	ENST00000450931	GATD1	Q8NB37	220 aa		3.98	□□□□□ -1.77
PMS1-217	ENST00000450931	TRAV1-1	A0A0B4J248	108 aa		3.98	□□□□□ -1.77
PMS1-217	ENST00000450931		I3L3M4	83 aa		3.98	□□□□□ -1.77
PMS1-217	ENST00000450931	IFNA1	P01562	189 aa		3.98	□□□□□ -1.77
PMS1-217	ENST00000450931	ESD	P10768	282 aa		3.98	□□□□□ -1.77

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