RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 SAPCD1Q5SSQ6 148 aa4.5□□□□□ -1.69
LINC01961-201ENST00000449954 FP248Q71RG6 208 aaPredicted RBP4.5□□□□□ -1.69
LINC01961-201ENST00000449954 PRNTQ86SH4 94 aa4.5□□□□□ -1.69
LINC01961-201ENST00000449954 STX12Q86Y82 276 aa4.5□□□□□ -1.69
LINC01961-201ENST00000449954 MCFD2Q8NI22 146 aa4.5□□□□□ -1.69
LINC01961-201ENST00000449954 LINC00526Q96FQ7 95 aa4.5□□□□□ -1.69
LINC01961-201ENST00000449954 SGK494Q96LW2 274 aa4.5□□□□□ -1.69
LINC01961-201ENST00000449954 MBD2Q9UBB5 411 aa4.5□□□□□ -1.69
LINC01961-201ENST00000449954 RSL24D1Q9UHA3 163 aaKnown RBP4.5□□□□□ -1.69
LINC01961-201ENST00000449954 PSG8Q9UQ74 426 aa4.5□□□□□ -1.69
LINC01961-201ENST00000449954 IGLV4-69A0A075B6H9 119 aa4.49□□□□□ -1.69
LINC01961-201ENST00000449954 IGKV3OR2-268A0A0C4DH90 116 aa4.49□□□□□ -1.69
LINC01961-201ENST00000449954 C9orf170A2RU37 121 aa4.49□□□□□ -1.69
LINC01961-201ENST00000449954 FABP5P3A8MUU1 101 aa4.49□□□□□ -1.69
LINC01961-201ENST00000449954 ZNF861PO60384 105 aa4.49□□□□□ -1.69
LINC01961-201ENST00000449954 TSHBP01222 138 aa4.49□□□□□ -1.69
LINC01961-201ENST00000449954 FLI1Q01543 452 aaPredicted RBP4.49□□□□□ -1.69
LINC01961-201ENST00000449954 TWIST1Q15672 202 aa4.49□□□□□ -1.69
LINC01961-201ENST00000449954 KRTAP13-3Q3SY46 172 aa4.49□□□□□ -1.69
LINC01961-201ENST00000449954 KRTAP11-1Q8IUC1 163 aa4.49□□□□□ -1.69
LINC01961-201ENST00000449954 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.48□□□□□ -1.69
LINC01961-201ENST00000449954 RGS5O15539 181 aa4.48□□□□□ -1.69
LINC01961-201ENST00000449954 TCRAP04437 139 aa4.48□□□□□ -1.69
LINC01961-201ENST00000449954 TMBIM6P55061 237 aa4.48□□□□□ -1.69
LINC01961-201ENST00000449954 VBP1P61758 197 aa4.48□□□□□ -1.69
LINC01961-201ENST00000449954 MEF2BQ02080 365 aaPredicted RBP4.48□□□□□ -1.69
LINC01961-201ENST00000449954 C5orf17Q8NAS9 161 aa4.48□□□□□ -1.69
LINC01961-201ENST00000449954 TRAV34A0A0B4J273 112 aa4.47□□□□□ -1.69
LINC01961-201ENST00000449954 A0A1B0GVG6 124 aa4.47□□□□□ -1.69
LINC01961-201ENST00000449954 KRBOX1C9JBD0 128 aa4.47□□□□□ -1.69
LINC01961-201ENST00000449954 H3BMQ9 156 aa4.47□□□□□ -1.69
LINC01961-201ENST00000449954 PVALBP20472 110 aaPredicted RBP4.47□□□□□ -1.69
LINC01961-201ENST00000449954 AP3S2P59780 193 aa4.47□□□□□ -1.69
LINC01961-201ENST00000449954 UBE2BP63146 152 aa4.47□□□□□ -1.69
LINC01961-201ENST00000449954 NUP35Q8NFH5 326 aa4.47□□□□□ -1.69
LINC01961-201ENST00000449954 PGLYRP4Q96LB8 373 aa4.47□□□□□ -1.69
LINC01961-201ENST00000449954 SDHCQ99643 169 aaPredicted RBP4.47□□□□□ -1.69
LINC01961-201ENST00000449954 IGKV2D-30A0A075B6S6 120 aa4.46□□□□□ -1.7
LINC01961-201ENST00000449954 C17orf112F2Z3M2 114 aa4.46□□□□□ -1.7
LINC01961-201ENST00000449954 PQLC2Q6ZP29 291 aa4.46□□□□□ -1.7
LINC01961-201ENST00000449954 LINC00469Q8N7U9 141 aa4.46□□□□□ -1.7
LINC01961-201ENST00000449954 THAP6Q8TBB0 222 aa4.46□□□□□ -1.7
LINC01961-201ENST00000449954 DEDD2Q8WXF8 326 aa4.46□□□□□ -1.7
LINC01961-201ENST00000449954 C11orf1Q9H5F2 150 aa4.46□□□□□ -1.7
LINC01961-201ENST00000449954 VCX3AQ9NNX9 186 aa4.46□□□□□ -1.7
LINC01961-201ENST00000449954 LSM5Q9Y4Y9 91 aaKnown RBP4.46□□□□□ -1.7
LINC01961-201ENST00000449954 GRIFINA4D1Z8 144 aa4.45□□□□□ -1.7
LINC01961-201ENST00000449954 C19orf71A6NCJ1 209 aa4.45□□□□□ -1.7
LINC01961-201ENST00000449954 M0R036 132 aa4.45□□□□□ -1.7
LINC01961-201ENST00000449954 XCL1P47992 114 aa4.45□□□□□ -1.7
LINC01961-201ENST00000449954 TMEM252Q8N6L7 170 aa4.45□□□□□ -1.7
LINC01961-201ENST00000449954 CAMK2N2Q96S95 79 aa4.45□□□□□ -1.7
LINC01961-201ENST00000449954 Q9H521 79 aa4.45□□□□□ -1.7
LINC01961-201ENST00000449954 IGSF23A1L1A6 192 aa4.44□□□□□ -1.7
LINC01961-201ENST00000449954 M0QXV9 152 aa4.44□□□□□ -1.7
LINC01961-201ENST00000449954 TNFRSF6BO95407 300 aa4.44□□□□□ -1.7
LINC01961-201ENST00000449954 FAM19A5Q7Z5A7 132 aaPredicted RBP4.44□□□□□ -1.7
LINC01961-201ENST00000449954 SLC7A5P1Q8MH63 180 aa4.44□□□□□ -1.7
LINC01961-201ENST00000449954 OR5A1Q8NGJ0 315 aa4.44□□□□□ -1.7
LINC01961-201ENST00000449954 WFDC1Q9HC57 220 aa4.44□□□□□ -1.7
LINC01961-201ENST00000449954 FLGP20930 4061 aaPredicted RBP4.44□□□□□ -1.7
LINC01961-201ENST00000449954 FAM168BA1KXE4 195 aa4.43□□□□□ -1.7
LINC01961-201ENST00000449954 CCL25O15444 150 aa4.43□□□□□ -1.7
LINC01961-201ENST00000449954 NUPR1O60356 82 aa4.43□□□□□ -1.7
LINC01961-201ENST00000449954 SMIM17P0DL12 118 aa4.43□□□□□ -1.7
LINC01961-201ENST00000449954 ESDP10768 282 aa4.43□□□□□ -1.7
LINC01961-201ENST00000449954 KRTAP13-2Q52LG2 175 aa4.43□□□□□ -1.7
LINC01961-201ENST00000449954 AMMECR1LQ6DCA0 310 aa4.43□□□□□ -1.7
LINC01961-201ENST00000449954 TOMM5Q8N4H5 51 aa4.43□□□□□ -1.7
LINC01961-201ENST00000449954 C2orf48Q96LS8 159 aa4.43□□□□□ -1.7
LINC01961-201ENST00000449954 FUNDC2Q9BWH2 189 aa4.43□□□□□ -1.7
LINC01961-201ENST00000449954 ZNF471Q9BX82 626 aaPredicted RBP4.43□□□□□ -1.7
LINC01961-201ENST00000449954 WDR61Q9GZS3 305 aaKnown RBP4.43□□□□□ -1.7
LINC01961-201ENST00000449954 ARL2-SNX15V9GYD0 113 aa4.43□□□□□ -1.7
LINC01961-201ENST00000449954 CTDSP2O14595 271 aa4.42□□□□□ -1.7
LINC01961-201ENST00000449954 RPL12P30050 165 aaKnown RBP4.42□□□□□ -1.7
LINC01961-201ENST00000449954 RPL28P46779 137 aaKnown RBP4.42□□□□□ -1.7
LINC01961-201ENST00000449954 COTL1Q14019 142 aa4.42□□□□□ -1.7
LINC01961-201ENST00000449954 FAM229BQ4G0N7 80 aa4.42□□□□□ -1.7
LINC01961-201ENST00000449954 MPLKIPQ8TAP9 179 aa4.42□□□□□ -1.7
LINC01961-201ENST00000449954 AP1S3Q96PC3 154 aa4.42□□□□□ -1.7
LINC01961-201ENST00000449954 EPDR1Q9UM22 224 aa4.42□□□□□ -1.7
LINC01961-201ENST00000449954 CHTOPQ9Y3Y2 248 aaKnown RBP4.42□□□□□ -1.7
LINC01961-201ENST00000449954 M0QY20 66 aa4.41□□□□□ -1.7
LINC01961-201ENST00000449954 BCL2L11O43521 198 aa4.41□□□□□ -1.7
LINC01961-201ENST00000449954 SH2D1AO60880 128 aa4.41□□□□□ -1.7
LINC01961-201ENST00000449954 CFC1P0CG37 223 aa4.41□□□□□ -1.7
LINC01961-201ENST00000449954 CD164L2Q6UWJ8 174 aa4.41□□□□□ -1.7
LINC01961-201ENST00000449954 OR10AG1Q8NH19 301 aa4.41□□□□□ -1.7
LINC01961-201ENST00000449954 IMMP2LQ96T52 175 aa4.41□□□□□ -1.7
LINC01961-201ENST00000449954 TMSB15BA0A087X1C1 80 aa4.4□□□□□ -1.71
LINC01961-201ENST00000449954 IGLV5-39A0A0G2JS06 123 aa4.4□□□□□ -1.71
LINC01961-201ENST00000449954 LINC00959A0A1B0GUT2 108 aa4.4□□□□□ -1.71
LINC01961-201ENST00000449954 H7C423 109 aa4.4□□□□□ -1.71
LINC01961-201ENST00000449954 ZNF25P17030 456 aaPredicted RBP4.4□□□□□ -1.71
LINC01961-201ENST00000449954 S100A5P33763 92 aa4.4□□□□□ -1.71
LINC01961-201ENST00000449954 CRIP1P50238 77 aa4.4□□□□□ -1.71
LINC01961-201ENST00000449954 NKX2-5P52952 324 aaPredicted RBP4.4□□□□□ -1.71
LINC01961-201ENST00000449954 SS18Q15532 418 aa4.4□□□□□ -1.71
LINC01961-201ENST00000449954 LINC00242Q5T6M2 205 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 160.9 ms