RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 NPCDR1Q9BY65 106 aa3.57□□□□□ -1.84
USP49-205ENST00000448078 PHLDA3Q9Y5J5 127 aa3.57□□□□□ -1.84
USP49-205ENST00000448078 TRBV25-1A0A075B6N4 114 aa3.56□□□□□ -1.84
USP49-205ENST00000448078 FAM24AA6NFZ4 105 aa3.56□□□□□ -1.84
USP49-205ENST00000448078 MT-ND6P03923 174 aa3.56□□□□□ -1.84
USP49-205ENST00000448078 LINC00694P0DN24 101 aa3.56□□□□□ -1.84
USP49-205ENST00000448078 TPT1P13693 172 aaKnown RBP3.56□□□□□ -1.84
USP49-205ENST00000448078 SULT1A2P50226 295 aa3.56□□□□□ -1.84
USP49-205ENST00000448078 UBE2D1P51668 147 aa3.56□□□□□ -1.84
USP49-205ENST00000448078 UBE2D3P61077 147 aa3.56□□□□□ -1.84
USP49-205ENST00000448078 UBE2D2P62837 147 aa3.56□□□□□ -1.84
USP49-205ENST00000448078 REG3AQ06141 175 aa3.56□□□□□ -1.84
USP49-205ENST00000448078 MPV17L2Q567V2 206 aa3.56□□□□□ -1.84
USP49-205ENST00000448078 FER1L6-AS1Q8NA97 138 aa3.56□□□□□ -1.84
USP49-205ENST00000448078 SCGB1C1Q8TD33 95 aa3.56□□□□□ -1.84
USP49-205ENST00000448078 MITD1Q8WV92 249 aa3.56□□□□□ -1.84
USP49-205ENST00000448078 FAM167A-AS1Q96KT0 104 aa3.56□□□□□ -1.84
USP49-205ENST00000448078 IL36BQ9NZH7 164 aa3.56□□□□□ -1.84
USP49-205ENST00000448078 FAT4Q6V0I7 4981 aa3.55□□□□□ -1.84
USP49-205ENST00000448078 NOL3O60936 208 aaKnown RBP3.55□□□□□ -1.84
USP49-205ENST00000448078 RNASE3P12724 160 aaKnown RBP3.55□□□□□ -1.84
USP49-205ENST00000448078 S100A5P33763 92 aa3.55□□□□□ -1.84
USP49-205ENST00000448078 RPL13AP40429 203 aaKnown RBP3.55□□□□□ -1.84
USP49-205ENST00000448078 RAB5CP51148 216 aa3.55□□□□□ -1.84
USP49-205ENST00000448078 RAB4BP61018 213 aa3.55□□□□□ -1.84
USP49-205ENST00000448078 RBX1P62877 108 aa3.55□□□□□ -1.84
USP49-205ENST00000448078 GCSAMLQ5JQS6 135 aa3.55□□□□□ -1.84
USP49-205ENST00000448078 ZFP82Q8N141 532 aa3.55□□□□□ -1.84
USP49-205ENST00000448078 TMEM252Q8N6L7 170 aa3.55□□□□□ -1.84
USP49-205ENST00000448078 OCC1Q8TAD7 63 aa3.55□□□□□ -1.84
USP49-205ENST00000448078 TSKUQ8WUA8 353 aa3.55□□□□□ -1.84
USP49-205ENST00000448078 C11orf52Q96A22 123 aa3.55□□□□□ -1.84
USP49-205ENST00000448078 SFRP2Q96HF1 295 aa3.55□□□□□ -1.84
USP49-205ENST00000448078 DERL1Q9BUN8 251 aa3.55□□□□□ -1.84
USP49-205ENST00000448078 IGLV1-50A0A075B6I6 118 aa3.54□□□□□ -1.84
USP49-205ENST00000448078 IGHV1-24A0A0C4DH33 117 aa3.54□□□□□ -1.84
USP49-205ENST00000448078 C5orf52A6NGY3 159 aa3.54□□□□□ -1.84
USP49-205ENST00000448078 B4DEV8 164 aa3.54□□□□□ -1.84
USP49-205ENST00000448078 UBE2L6O14933 153 aa3.54□□□□□ -1.84
USP49-205ENST00000448078 NDUFB6O95139 128 aa3.54□□□□□ -1.84
USP49-205ENST00000448078 SMIM17P0DL12 118 aa3.54□□□□□ -1.84
USP49-205ENST00000448078 EIF5AP63241 154 aaKnown RBP3.54□□□□□ -1.84
USP49-205ENST00000448078 FLI1Q01543 452 aaPredicted RBP3.54□□□□□ -1.84
USP49-205ENST00000448078 CLPSL2Q6UWE3 100 aa3.54□□□□□ -1.84
USP49-205ENST00000448078 PRNTQ86SH4 94 aa3.54□□□□□ -1.84
USP49-205ENST00000448078 PSG8Q9UQ74 426 aa3.54□□□□□ -1.84
USP49-205ENST00000448078 MUC2Q02817 5179 aa3.54□□□□□ -1.84
USP49-205ENST00000448078 M0R381 172 aa3.53□□□□□ -1.84
USP49-205ENST00000448078 ARMS2P0C7Q2 107 aa3.53□□□□□ -1.84
USP49-205ENST00000448078 ZNF56Q15929 161 aa3.53□□□□□ -1.84
USP49-205ENST00000448078 Q1RN00 199 aa3.53□□□□□ -1.84
USP49-205ENST00000448078 ZNF674Q2M3X9 581 aa3.53□□□□□ -1.84
USP49-205ENST00000448078 TRIQKQ629K1 86 aa3.53□□□□□ -1.84
USP49-205ENST00000448078 C5orf17Q8NAS9 161 aa3.53□□□□□ -1.84
USP49-205ENST00000448078 INO80EQ8NBZ0 244 aaPredicted RBP3.53□□□□□ -1.84
USP49-205ENST00000448078 OR5C1Q8NGR4 320 aa3.53□□□□□ -1.84
USP49-205ENST00000448078 Q9UF83 564 aa3.53□□□□□ -1.84
USP49-205ENST00000448078 CRCT1Q9UGL9 99 aa3.53□□□□□ -1.84
USP49-205ENST00000448078 H3BVH4 76 aa3.52□□□□□ -1.85
USP49-205ENST00000448078 ATP6V1G2O95670 118 aa3.52□□□□□ -1.85
USP49-205ENST00000448078 TCRAP04437 139 aa3.52□□□□□ -1.85
USP49-205ENST00000448078 ZNF80P51504 273 aaPredicted RBP3.52□□□□□ -1.85
USP49-205ENST00000448078 C1orf137Q5JT78 98 aa3.52□□□□□ -1.85
USP49-205ENST00000448078 UFSP1Q6NVU6 142 aa3.52□□□□□ -1.85
USP49-205ENST00000448078 ISOC2Q96AB3 205 aa3.52□□□□□ -1.85
USP49-205ENST00000448078 TVP23CQ96ET8 276 aa3.52□□□□□ -1.85
USP49-205ENST00000448078 AQP10Q96PS8 301 aa3.52□□□□□ -1.85
USP49-205ENST00000448078 TRBV6-1A0A0K0K1D8 114 aa3.51□□□□□ -1.85
USP49-205ENST00000448078 IGSF23A1L1A6 192 aa3.51□□□□□ -1.85
USP49-205ENST00000448078 DNLZQ5SXM8 178 aa3.51□□□□□ -1.85
USP49-205ENST00000448078 TMEM243Q9BU79 118 aa3.51□□□□□ -1.85
USP49-205ENST00000448078 ZNF471Q9BX82 626 aaPredicted RBP3.51□□□□□ -1.85
USP49-205ENST00000448078 WDR61Q9GZS3 305 aaKnown RBP3.51□□□□□ -1.85
USP49-205ENST00000448078 DHRS4-AS1Q9P1J3 65 aa3.51□□□□□ -1.85
USP49-205ENST00000448078 EPDR1Q9UM22 224 aa3.51□□□□□ -1.85
USP49-205ENST00000448078 EIF3GO75821 320 aaKnown RBP eCLIP3.5□□□□□ -1.85
USP49-205ENST00000448078 GNG5P63218 68 aa3.5□□□□□ -1.85
USP49-205ENST00000448078 IQCJQ1A5X6 159 aa3.5□□□□□ -1.85
USP49-205ENST00000448078 FAM162BQ5T6X4 162 aa3.5□□□□□ -1.85
USP49-205ENST00000448078 AMMECR1LQ6DCA0 310 aa3.5□□□□□ -1.85
USP49-205ENST00000448078 EIF5AL1Q6IS14 154 aaKnown RBP3.5□□□□□ -1.85
USP49-205ENST00000448078 KRTAP26-1Q6PEX3 210 aa3.5□□□□□ -1.85
USP49-205ENST00000448078 SUN5Q8TC36 379 aa3.5□□□□□ -1.85
USP49-205ENST00000448078 NKX6-2Q9C056 277 aaPredicted RBP3.5□□□□□ -1.85
USP49-205ENST00000448078 TMEM167BQ9NRX6 74 aa3.5□□□□□ -1.85
USP49-205ENST00000448078 FLVCR2Q9UPI3 526 aa3.5□□□□□ -1.85
USP49-205ENST00000448078 ZFP30Q9Y2G7 519 aa3.5□□□□□ -1.85
USP49-205ENST00000448078 A0A096LNI7 61 aa3.49□□□□□ -1.85
USP49-205ENST00000448078 IGKV3OR2-268A0A0C4DH90 116 aa3.49□□□□□ -1.85
USP49-205ENST00000448078 MUC21A0A0G2JKD1 596 aa3.49□□□□□ -1.85
USP49-205ENST00000448078 LOC107984640A0A0U1RRK4 108 aa3.49□□□□□ -1.85
USP49-205ENST00000448078 GRIFINA4D1Z8 144 aa3.49□□□□□ -1.85
USP49-205ENST00000448078 KRBOX1C9JBD0 128 aa3.49□□□□□ -1.85
USP49-205ENST00000448078 M0R036 132 aa3.49□□□□□ -1.85
USP49-205ENST00000448078 FGF6P10767 208 aa3.49□□□□□ -1.85
USP49-205ENST00000448078 FHITP49789 147 aa3.49□□□□□ -1.85
USP49-205ENST00000448078 TMBIM6P55061 237 aa3.49□□□□□ -1.85
USP49-205ENST00000448078 KRTAP12-2P59991 146 aa3.49□□□□□ -1.85
USP49-205ENST00000448078 SPCS2Q15005 226 aa3.49□□□□□ -1.85
USP49-205ENST00000448078 SPANXN1Q5VSR9 72 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms