RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 COA6Q5JTJ3 125 aaKnown RBP13.56□□□□□ -0.24
SGCE-207ENST00000447873 LINC01546A6NGU7 62 aa13.55□□□□□ -0.24
SGCE-207ENST00000447873 LINC00310P59036 64 aa13.55□□□□□ -0.24
SGCE-207ENST00000447873 GTSF1LQ9H1H1 148 aa13.55□□□□□ -0.24
SGCE-207ENST00000447873 HSBP1O75506 76 aa13.54□□□□□ -0.24
SGCE-207ENST00000447873 ORMDL2Q53FV1 153 aa13.54□□□□□ -0.24
SGCE-207ENST00000447873 NUPR1O60356 82 aa13.54□□□□□ -0.24
SGCE-207ENST00000447873 TMEM97Q5BJF2 176 aa13.54□□□□□ -0.24
SGCE-207ENST00000447873 WWC2-AS2Q96NR7 200 aa13.54□□□□□ -0.24
SGCE-207ENST00000447873 KLK5Q9Y337 293 aaPredicted RBP13.54□□□□□ -0.24
SGCE-207ENST00000447873 AMTP48728 403 aa13.52□□□□□ -0.25
SGCE-207ENST00000447873 NTM-AS1Q6ZSK4 140 aa13.52□□□□□ -0.25
SGCE-207ENST00000447873 CSMD3Q7Z407 3707 aa13.52□□□□□ -0.25
SGCE-207ENST00000447873 DYNC2H1Q8NCM8 4307 aaKnown RBP13.51□□□□□ -0.25
SGCE-207ENST00000447873 TRBV6-8A0A0A6YYG3 113 aa13.51□□□□□ -0.25
SGCE-207ENST00000447873 PMCHL1Q16048 86 aa13.51□□□□□ -0.25
SGCE-207ENST00000447873 TRBV25-1A0A075B6N4 114 aa13.5□□□□□ -0.25
SGCE-207ENST00000447873 IGHV1-24A0A0C4DH33 117 aa13.5□□□□□ -0.25
SGCE-207ENST00000447873 ESDP10768 282 aa13.5□□□□□ -0.25
SGCE-207ENST00000447873 SNRPEP62304 92 aaKnown RBP13.5□□□□□ -0.25
SGCE-207ENST00000447873 LYPD5Q6UWN5 251 aa13.5□□□□□ -0.25
SGCE-207ENST00000447873 MUC7Q8TAX7 377 aa13.5□□□□□ -0.25
SGCE-207ENST00000447873 BTF3P20290 206 aaKnown RBP13.49□□□□□ -0.25
SGCE-207ENST00000447873 ZFAND6Q6FIF0 208 aa13.49□□□□□ -0.25
SGCE-207ENST00000447873 FAM19A2Q8N3H0 131 aa13.49□□□□□ -0.25
SGCE-207ENST00000447873 G0S2P27469 103 aa13.49□□□□□ -0.25
SGCE-207ENST00000447873 PDZD11Q5EBL8 140 aa13.49□□□□□ -0.25
SGCE-207ENST00000447873 CHCHD7Q9BUK0 85 aa13.49□□□□□ -0.25
SGCE-207ENST00000447873 TMEM243Q9BU79 118 aa13.48□□□□□ -0.25
SGCE-207ENST00000447873 C5orf52A6NGY3 159 aa13.47□□□□□ -0.25
SGCE-207ENST00000447873 HBDP02042 147 aa13.47□□□□□ -0.25
SGCE-207ENST00000447873 TIRAPP58753 221 aa13.47□□□□□ -0.25
SGCE-207ENST00000447873 ESRGQ1W209 222 aa13.47□□□□□ -0.25
SGCE-207ENST00000447873 C20orf203Q8NBC4 194 aa13.47□□□□□ -0.25
SGCE-207ENST00000447873 LELP1Q5T871 98 aa13.46□□□□□ -0.25
SGCE-207ENST00000447873 C2orf66Q6UXQ4 117 aa13.46□□□□□ -0.25
SGCE-207ENST00000447873 TMEM18Q96B42 140 aa13.46□□□□□ -0.25
SGCE-207ENST00000447873 CHCHD5Q9BSY4 110 aa13.46□□□□□ -0.25
SGCE-207ENST00000447873 APLNQ9ULZ1 77 aa13.46□□□□□ -0.25
SGCE-207ENST00000447873 CYSLTR1Q9Y271 337 aa13.46□□□□□ -0.25
SGCE-207ENST00000447873 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.45□□□□□ -0.26
SGCE-207ENST00000447873 A0A096LNJ9 63 aa13.45□□□□□ -0.26
SGCE-207ENST00000447873 IGKV2-29A2NJV5 120 aaPredicted RBP13.45□□□□□ -0.26
SGCE-207ENST00000447873 UBE2L6O14933 153 aa13.45□□□□□ -0.26
SGCE-207ENST00000447873 TCTAP57738 103 aa13.45□□□□□ -0.26
SGCE-207ENST00000447873 RPL39P62891 51 aaKnown RBP13.45□□□□□ -0.26
SGCE-207ENST00000447873 S100A2P29034 98 aa13.45□□□□□ -0.26
SGCE-207ENST00000447873 HIST3H2BBQ8N257 126 aa13.45□□□□□ -0.26
SGCE-207ENST00000447873 CCL18P55774 89 aa13.44□□□□□ -0.26
SGCE-207ENST00000447873 TOMM6Q96B49 74 aa13.44□□□□□ -0.26
SGCE-207ENST00000447873 TENM2Q9NT68 2774 aa13.43□□□□□ -0.26
SGCE-207ENST00000447873 TRAV8-6A0A0B4J262 113 aa13.43□□□□□ -0.26
SGCE-207ENST00000447873 LINC01549A6NIU2 74 aa13.42□□□□□ -0.26
SGCE-207ENST00000447873 GAGE6Q13070 117 aa13.42□□□□□ -0.26
SGCE-207ENST00000447873 H7C423 109 aa13.41□□□□□ -0.26
SGCE-207ENST00000447873 LEPROTL1O95214 131 aa13.41□□□□□ -0.26
SGCE-207ENST00000447873 FABP4P15090 132 aa13.41□□□□□ -0.26
SGCE-207ENST00000447873 TMEM262E9PQX1 116 aa13.41□□□□□ -0.26
SGCE-207ENST00000447873 SCGB3A1Q96QR1 104 aa13.41□□□□□ -0.26
SGCE-207ENST00000447873 FGF6P10767 208 aa13.4□□□□□ -0.26
SGCE-207ENST00000447873 SMAGPQ0VAQ4 97 aa13.4□□□□□ -0.26
SGCE-207ENST00000447873 AMMECR1LQ6DCA0 310 aa13.4□□□□□ -0.26
SGCE-207ENST00000447873 LINC00588Q9Y4M8 146 aa13.4□□□□□ -0.26
SGCE-207ENST00000447873 STARD9Q9P2P6 4700 aa13.39□□□□□ -0.27
SGCE-207ENST00000447873 PACRGQ96M98 296 aaPredicted RBP13.39□□□□□ -0.27
SGCE-207ENST00000447873 UBE2D4Q9Y2X8 147 aa13.39□□□□□ -0.27
SGCE-207ENST00000447873 DGAT2L7PQ6IED9 249 aa13.38□□□□□ -0.27
SGCE-207ENST00000447873 ERASQ7Z444 233 aa13.38□□□□□ -0.27
SGCE-207ENST00000447873 HIST1H2BLQ99880 126 aa13.38□□□□□ -0.27
SGCE-207ENST00000447873 SPANXA1Q9NS26 97 aa13.38□□□□□ -0.27
SGCE-207ENST00000447873 HSPB8Q9UJY1 196 aa13.38□□□□□ -0.27
SGCE-207ENST00000447873 MRPS16Q9Y3D3 137 aaKnown RBP13.38□□□□□ -0.27
SGCE-207ENST00000447873 PLECQ15149 4684 aaKnown RBP13.37□□□□□ -0.27
SGCE-207ENST00000447873 IGIPA6NJ69 53 aa13.37□□□□□ -0.27
SGCE-207ENST00000447873 ATP5LO75964 103 aa13.37□□□□□ -0.27
SGCE-207ENST00000447873 PKIAP61925 76 aa13.37□□□□□ -0.27
SGCE-207ENST00000447873 MRPL52Q86TS9 123 aaKnown RBP13.37□□□□□ -0.27
SGCE-207ENST00000447873 WFDC10BQ8IUB3 73 aa13.37□□□□□ -0.27
SGCE-207ENST00000447873 TIMM21Q9BVV7 248 aa13.37□□□□□ -0.27
SGCE-207ENST00000447873 PYGO1Q9Y3Y4 419 aa13.37□□□□□ -0.27
SGCE-207ENST00000447873 A0A087WX48 190 aa13.37□□□□□ -0.27
SGCE-207ENST00000447873 IFITM10A6NMD0 228 aa13.37□□□□□ -0.27
SGCE-207ENST00000447873 C3orf84H3BNL1 204 aa13.37□□□□□ -0.27
SGCE-207ENST00000447873 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.37□□□□□ -0.27
SGCE-207ENST00000447873 UBE2DNLQ8IWF7 75 aa13.37□□□□□ -0.27
SGCE-207ENST00000447873 TMEM101Q96IK0 257 aa13.37□□□□□ -0.27
SGCE-207ENST00000447873 TIMM17AQ99595 171 aa13.37□□□□□ -0.27
SGCE-207ENST00000447873 ZNF25P17030 456 aaPredicted RBP13.36□□□□□ -0.27
SGCE-207ENST00000447873 CASC10Q5T4H9 136 aa13.36□□□□□ -0.27
SGCE-207ENST00000447873 LINC00173Q6ZV60 143 aa13.36□□□□□ -0.27
SGCE-207ENST00000447873 OR5A1Q8NGJ0 315 aa13.36□□□□□ -0.27
SGCE-207ENST00000447873 TMEM141Q96I45 108 aa13.36□□□□□ -0.27
SGCE-207ENST00000447873 CSDC2Q9Y534 153 aaKnown RBP13.36□□□□□ -0.27
SGCE-207ENST00000447873 MPV17L2Q567V2 206 aa13.35□□□□□ -0.27
SGCE-207ENST00000447873 IFI27L1Q96BM0 104 aa13.35□□□□□ -0.27
SGCE-207ENST00000447873 OPRPNQ99935 248 aaPredicted RBP13.35□□□□□ -0.27
SGCE-207ENST00000447873 A0A1B0GUV1 79 aa13.34□□□□□ -0.27
SGCE-207ENST00000447873 RBX1P62877 108 aa13.34□□□□□ -0.27
SGCE-207ENST00000447873 Q8N976 141 aa13.34□□□□□ -0.27
SGCE-207ENST00000447873 Q6ZN92 141 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms