RNA–Protein interactions for RNA: ENST00000439974.3

ITGB1-207, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-207ENST00000439974 A0A087WX48 190 aa10.68□□□□□ -0.7
ITGB1-207ENST00000439974 F8W036 122 aa10.68□□□□□ -0.7
ITGB1-207ENST00000439974 RPS10P46783 165 aaKnown RBP10.68□□□□□ -0.7
ITGB1-207ENST00000439974 LAGE3Q14657 143 aa10.68□□□□□ -0.7
ITGB1-207ENST00000439974 MPV17L2Q567V2 206 aa10.68□□□□□ -0.7
ITGB1-207ENST00000439974 UQCC3Q6UW78 93 aa10.68□□□□□ -0.7
ITGB1-207ENST00000439974 Q8N814 137 aa10.68□□□□□ -0.7
ITGB1-207ENST00000439974 MYCBP2O75592 4640 aa10.67□□□□□ -0.7
ITGB1-207ENST00000439974 Q8N976 141 aa10.67□□□□□ -0.7
ITGB1-207ENST00000439974 TMEM70Q9BUB7 260 aa10.67□□□□□ -0.7
ITGB1-207ENST00000439974 TRBV25-1A0A075B6N4 114 aa10.66□□□□□ -0.7
ITGB1-207ENST00000439974 IGHV1-24A0A0C4DH33 117 aa10.66□□□□□ -0.7
ITGB1-207ENST00000439974 PNRC1Q12796 327 aaPredicted RBP10.66□□□□□ -0.7
ITGB1-207ENST00000439974 ATRAIDQ6UW56 229 aa10.66□□□□□ -0.7
ITGB1-207ENST00000439974 TM2D2Q9BX73 214 aa10.66□□□□□ -0.7
ITGB1-207ENST00000439974 LINC00862A6NCI5 91 aa10.65□□□□□ -0.7
ITGB1-207ENST00000439974 SDHAF1A6NFY7 115 aa10.65□□□□□ -0.7
ITGB1-207ENST00000439974 PPP1R2P9O14990 202 aa10.65□□□□□ -0.7
ITGB1-207ENST00000439974 SMR3BP02814 79 aaPredicted RBP10.65□□□□□ -0.7
ITGB1-207ENST00000439974 MT-ND4LP03901 98 aa10.65□□□□□ -0.7
ITGB1-207ENST00000439974 HAMPP81172 84 aa10.65□□□□□ -0.7
ITGB1-207ENST00000439974 IQCJQ1A5X6 159 aa10.65□□□□□ -0.7
ITGB1-207ENST00000439974 KCNIP4Q6PIL6 250 aa10.65□□□□□ -0.7
ITGB1-207ENST00000439974 UBE2WQ96B02 151 aa10.65□□□□□ -0.7
ITGB1-207ENST00000439974 DMBT1Q9UGM3 2413 aaPredicted RBP10.64□□□□□ -0.71
ITGB1-207ENST00000439974 A0A1B0GXF2 115 aa10.64□□□□□ -0.71
ITGB1-207ENST00000439974 RBX1P62877 108 aa10.64□□□□□ -0.71
ITGB1-207ENST00000439974 COTL1Q14019 142 aa10.64□□□□□ -0.71
ITGB1-207ENST00000439974 MRPL51Q4U2R6 128 aaKnown RBP10.64□□□□□ -0.71
ITGB1-207ENST00000439974 TMEM97Q5BJF2 176 aa10.64□□□□□ -0.71
ITGB1-207ENST00000439974 FAM104BQ5XKR9 115 aa10.64□□□□□ -0.71
ITGB1-207ENST00000439974 CLPSL2Q6UWE3 100 aa10.64□□□□□ -0.71
ITGB1-207ENST00000439974 TMEM243Q9BU79 118 aa10.64□□□□□ -0.71
ITGB1-207ENST00000439974 FAM229AH3BQW9 127 aa10.63□□□□□ -0.71
ITGB1-207ENST00000439974 ANGP03950 147 aaKnown RBP10.63□□□□□ -0.71
ITGB1-207ENST00000439974 AMTP48728 403 aa10.63□□□□□ -0.71
ITGB1-207ENST00000439974 HBBP68871 147 aa10.63□□□□□ -0.71
ITGB1-207ENST00000439974 ANAPC16Q96DE5 110 aa10.63□□□□□ -0.71
ITGB1-207ENST00000439974 MRAP2Q96G30 205 aa10.63□□□□□ -0.71
ITGB1-207ENST00000439974 ST20Q9HBF5 79 aa10.63□□□□□ -0.71
ITGB1-207ENST00000439974 TRAV8-3A0A0A6YYJ7 113 aa10.62□□□□□ -0.71
ITGB1-207ENST00000439974 PMCHP20382 165 aa10.62□□□□□ -0.71
ITGB1-207ENST00000439974 TMEM242Q9NWH2 141 aa10.62□□□□□ -0.71
ITGB1-207ENST00000439974 FLG2Q5D862 2391 aaPredicted RBP10.62□□□□□ -0.71
ITGB1-207ENST00000439974 IGKV2D-24A0A075B6R9 120 aa10.61□□□□□ -0.71
ITGB1-207ENST00000439974 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.61□□□□□ -0.71
ITGB1-207ENST00000439974 TRBV6-5A0A0K0K1A5 114 aa10.61□□□□□ -0.71
ITGB1-207ENST00000439974 IGKV2-29A2NJV5 120 aaPredicted RBP10.61□□□□□ -0.71
ITGB1-207ENST00000439974 LECT2O14960 151 aa10.61□□□□□ -0.71
ITGB1-207ENST00000439974 WFDC2Q14508 124 aa10.61□□□□□ -0.71
ITGB1-207ENST00000439974 ENHOQ6UWT2 76 aa10.61□□□□□ -0.71
ITGB1-207ENST00000439974 NRACQ8N912 160 aa10.61□□□□□ -0.71
ITGB1-207ENST00000439974 CHCHD7Q9BUK0 85 aa10.61□□□□□ -0.71
ITGB1-207ENST00000439974 IGLV4-60A0A075B6I1 120 aa10.6□□□□□ -0.71
ITGB1-207ENST00000439974 A0A1B0GW15 77 aa10.6□□□□□ -0.71
ITGB1-207ENST00000439974 SEC11CQ9BY50 192 aa10.6□□□□□ -0.71
ITGB1-207ENST00000439974 I3L3M4 83 aa10.59□□□□□ -0.71
ITGB1-207ENST00000439974 UBE2L6O14933 153 aa10.59□□□□□ -0.71
ITGB1-207ENST00000439974 TSHBP01222 138 aa10.59□□□□□ -0.71
ITGB1-207ENST00000439974 APCSP02743 223 aa10.59□□□□□ -0.71
ITGB1-207ENST00000439974 CKS2P33552 79 aa10.59□□□□□ -0.71
ITGB1-207ENST00000439974 ELOBQ15370 118 aa10.59□□□□□ -0.71
ITGB1-207ENST00000439974 LINC00269Q8N2A0 174 aa10.59□□□□□ -0.71
ITGB1-207ENST00000439974 FAM30AQ9NZY2 134 aa10.59□□□□□ -0.71
ITGB1-207ENST00000439974 D6R8Y8 96 aa10.58□□□□□ -0.72
ITGB1-207ENST00000439974 CRPP02741 224 aa10.58□□□□□ -0.72
ITGB1-207ENST00000439974 POLR2KP53803 58 aaKnown RBP10.58□□□□□ -0.72
ITGB1-207ENST00000439974 C20orf203Q8NBC4 194 aa10.58□□□□□ -0.72
ITGB1-207ENST00000439974 BAALCQ8WXS3 180 aa10.58□□□□□ -0.72
ITGB1-207ENST00000439974 COX11Q9Y6N1 276 aa10.58□□□□□ -0.72
ITGB1-207ENST00000439974 S100A8P05109 93 aa10.57□□□□□ -0.72
ITGB1-207ENST00000439974 PKIAP61925 76 aa10.57□□□□□ -0.72
ITGB1-207ENST00000439974 ATP5L2Q7Z4Y8 100 aa10.57□□□□□ -0.72
ITGB1-207ENST00000439974 RMI2Q96E14 147 aa10.57□□□□□ -0.72
ITGB1-207ENST00000439974 IGKV3OR2-268A0A0C4DH90 116 aa10.56□□□□□ -0.72
ITGB1-207ENST00000439974 NPYP01303 97 aa10.56□□□□□ -0.72
ITGB1-207ENST00000439974 SUMO2P61956 95 aaKnown RBP10.56□□□□□ -0.72
ITGB1-207ENST00000439974 C10orf91Q5T1B1 145 aa10.56□□□□□ -0.72
ITGB1-207ENST00000439974 SRRM2Q9UQ35 2752 aaKnown RBP10.56□□□□□ -0.72
ITGB1-207ENST00000439974 IGLV10-54A0A075B6I4 117 aa10.55□□□□□ -0.72
ITGB1-207ENST00000439974 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.55□□□□□ -0.72
ITGB1-207ENST00000439974 TRBV27A0A0K0K1C4 114 aa10.55□□□□□ -0.72
ITGB1-207ENST00000439974 C7orf77A4D0Y5 90 aa10.55□□□□□ -0.72
ITGB1-207ENST00000439974 TNFRSF6BO95407 300 aa10.55□□□□□ -0.72
ITGB1-207ENST00000439974 RNASEKQ6P5S7 137 aaKnown RBP10.55□□□□□ -0.72
ITGB1-207ENST00000439974 Q6ZSA8 131 aa10.55□□□□□ -0.72
ITGB1-207ENST00000439974 BTF3L4Q96K17 158 aa10.55□□□□□ -0.72
ITGB1-207ENST00000439974 CARHSP1Q9Y2V2 147 aaKnown RBP10.55□□□□□ -0.72
ITGB1-207ENST00000439974 VCYO14598 125 aa10.54□□□□□ -0.72
ITGB1-207ENST00000439974 FGF6P10767 208 aa10.54□□□□□ -0.72
ITGB1-207ENST00000439974 REG3AQ06141 175 aa10.54□□□□□ -0.72
ITGB1-207ENST00000439974 Q0VG73 95 aa10.54□□□□□ -0.72
ITGB1-207ENST00000439974 AMMECR1LQ6DCA0 310 aa10.54□□□□□ -0.72
ITGB1-207ENST00000439974 CLRN3Q8NCR9 226 aa10.54□□□□□ -0.72
ITGB1-207ENST00000439974 C1orf43Q9BWL3 253 aa10.54□□□□□ -0.72
ITGB1-207ENST00000439974 CTDSP1Q9GZU7 261 aa10.54□□□□□ -0.72
ITGB1-207ENST00000439974 RPS10P5Q9NQ39 176 aa10.54□□□□□ -0.72
ITGB1-207ENST00000439974 ESDP10768 282 aa10.53□□□□□ -0.72
ITGB1-207ENST00000439974 FCER1GP30273 86 aa10.53□□□□□ -0.72
ITGB1-207ENST00000439974 PRR34Q9NV39 138 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms