RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.42□□□□□ -1.22
CDC42SE1-202ENST00000439374 IGKV2-29A2NJV5 120 aaPredicted RBP7.42□□□□□ -1.22
CDC42SE1-202ENST00000439374 TSHBP01222 138 aa7.42□□□□□ -1.22
CDC42SE1-202ENST00000439374 ZNF22P17026 224 aaPredicted RBP7.42□□□□□ -1.22
CDC42SE1-202ENST00000439374 KLK5Q9Y337 293 aaPredicted RBP7.42□□□□□ -1.22
CDC42SE1-202ENST00000439374 SNRPD3P62318 126 aaKnown RBP7.42□□□□□ -1.22
CDC42SE1-202ENST00000439374 LINC01620Q4KN68 170 aa7.42□□□□□ -1.22
CDC42SE1-202ENST00000439374 DGAT2L7PQ6IED9 249 aa7.42□□□□□ -1.22
CDC42SE1-202ENST00000439374 ITPR3Q14573 2671 aa7.41□□□□□ -1.22
CDC42SE1-202ENST00000439374 H3BMM0 161 aa7.41□□□□□ -1.22
CDC42SE1-202ENST00000439374 TRIAP1O43715 76 aa7.41□□□□□ -1.22
CDC42SE1-202ENST00000439374 ZFAND2AQ8N6M9 145 aa7.41□□□□□ -1.22
CDC42SE1-202ENST00000439374 UBE2WQ96B02 151 aa7.41□□□□□ -1.22
CDC42SE1-202ENST00000439374 IGHV3-53P01767 116 aa7.41□□□□□ -1.22
CDC42SE1-202ENST00000439374 IGHV3-30P01768 117 aa7.41□□□□□ -1.22
CDC42SE1-202ENST00000439374 IGHV3-30-5P0DP03 117 aa7.41□□□□□ -1.22
CDC42SE1-202ENST00000439374 C18orf65Q6ZTR6 163 aa7.41□□□□□ -1.22
CDC42SE1-202ENST00000439374 C11orf68Q9H3H3 251 aaKnown RBP7.41□□□□□ -1.22
CDC42SE1-202ENST00000439374 PRORYQ9H606 182 aa7.41□□□□□ -1.22
CDC42SE1-202ENST00000439374 NIPBLQ6KC79 2804 aaeCLIP7.41□□□□□ -1.22
CDC42SE1-202ENST00000439374 TRBV7-9A0A0J9YWB2 115 aa7.4□□□□□ -1.22
CDC42SE1-202ENST00000439374 DEFB131AP59861 70 aa7.4□□□□□ -1.22
CDC42SE1-202ENST00000439374 C9orf47Q6ZRZ4 202 aa7.4□□□□□ -1.22
CDC42SE1-202ENST00000439374 USMG5Q96IX5 58 aa7.4□□□□□ -1.22
CDC42SE1-202ENST00000439374 IGLV4-69A0A075B6H9 119 aa7.4□□□□□ -1.22
CDC42SE1-202ENST00000439374 RPL13AP40429 203 aaKnown RBP7.4□□□□□ -1.22
CDC42SE1-202ENST00000439374 UBE2D1P51668 147 aa7.4□□□□□ -1.22
CDC42SE1-202ENST00000439374 TMEM190Q8WZ59 177 aa7.4□□□□□ -1.22
CDC42SE1-202ENST00000439374 MXRA5Q9NR99 2828 aa7.4□□□□□ -1.22
CDC42SE1-202ENST00000439374 M0R2P5 195 aa7.4□□□□□ -1.23
CDC42SE1-202ENST00000439374 IGHG2P01859 326 aa7.4□□□□□ -1.23
CDC42SE1-202ENST00000439374 SLURP1P55000 103 aa7.4□□□□□ -1.23
CDC42SE1-202ENST00000439374 KRTAP10-9P60411 292 aa7.4□□□□□ -1.23
CDC42SE1-202ENST00000439374 TOMM7Q9P0U1 55 aa7.4□□□□□ -1.23
CDC42SE1-202ENST00000439374 FAM236AA0A1B0GUQ0 79 aa7.39□□□□□ -1.23
CDC42SE1-202ENST00000439374 FAM236BA0A1B0GV22 79 aa7.39□□□□□ -1.23
CDC42SE1-202ENST00000439374 RNASE3P12724 160 aaKnown RBP7.39□□□□□ -1.23
CDC42SE1-202ENST00000439374 DYNLRB2Q8TF09 96 aa7.39□□□□□ -1.23
CDC42SE1-202ENST00000439374 VCYO14598 125 aa7.39□□□□□ -1.23
CDC42SE1-202ENST00000439374 GPHB5Q86YW7 130 aa7.39□□□□□ -1.23
CDC42SE1-202ENST00000439374 UBE2E2Q96LR5 201 aa7.39□□□□□ -1.23
CDC42SE1-202ENST00000439374 TIMM21Q9BVV7 248 aa7.39□□□□□ -1.23
CDC42SE1-202ENST00000439374 TRAV13-1A0A0B4J241 112 aa7.39□□□□□ -1.23
CDC42SE1-202ENST00000439374 A6NDX4 124 aa7.39□□□□□ -1.23
CDC42SE1-202ENST00000439374 IGHV3-33P01772 117 aa7.39□□□□□ -1.23
CDC42SE1-202ENST00000439374 RPL32P62910 135 aaKnown RBP7.39□□□□□ -1.23
CDC42SE1-202ENST00000439374 ATXN8Q156A1 80 aa7.39□□□□□ -1.23
CDC42SE1-202ENST00000439374 IGHV4OR15-8A0A075B7B6 117 aa7.38□□□□□ -1.23
CDC42SE1-202ENST00000439374 A0A087WW49 117 aa7.38□□□□□ -1.23
CDC42SE1-202ENST00000439374 EIF4EBP3O60516 100 aaPredicted RBP7.38□□□□□ -1.23
CDC42SE1-202ENST00000439374 APRG1Q8IVJ8 170 aa7.38□□□□□ -1.23
CDC42SE1-202ENST00000439374 NDUFA12Q9UI09 145 aa7.38□□□□□ -1.23
CDC42SE1-202ENST00000439374 COX6CP09669 75 aa7.38□□□□□ -1.23
CDC42SE1-202ENST00000439374 NHLRC4P0CG21 123 aaPredicted RBP7.38□□□□□ -1.23
CDC42SE1-202ENST00000439374 UBE2D3P61077 147 aa7.37□□□□□ -1.23
CDC42SE1-202ENST00000439374 UBE2D2P62837 147 aa7.37□□□□□ -1.23
CDC42SE1-202ENST00000439374 TRAV12-1A0A0B4J245 112 aa7.37□□□□□ -1.23
CDC42SE1-202ENST00000439374 NXPH4O95158 308 aa7.37□□□□□ -1.23
CDC42SE1-202ENST00000439374 ADAMTSL4-AS1Q5T5F5 129 aa7.37□□□□□ -1.23
CDC42SE1-202ENST00000439374 SLC25A29Q8N8R3 303 aa7.37□□□□□ -1.23
CDC42SE1-202ENST00000439374 CNFNQ9BYD5 112 aa7.37□□□□□ -1.23
CDC42SE1-202ENST00000439374 Q9HAA7 133 aa7.37□□□□□ -1.23
CDC42SE1-202ENST00000439374 HELZ2Q9BYK8 2649 aaKnown RBP7.37□□□□□ -1.23
CDC42SE1-202ENST00000439374 NDUFA7O95182 113 aa7.37□□□□□ -1.23
CDC42SE1-202ENST00000439374 TRGV11A0A075B6L2 103 aa7.36□□□□□ -1.23
CDC42SE1-202ENST00000439374 LOC107984640A0A0U1RRK4 108 aa7.36□□□□□ -1.23
CDC42SE1-202ENST00000439374 LINC01356Q8N9X3 169 aa7.36□□□□□ -1.23
CDC42SE1-202ENST00000439374 LINC01587Q99440 93 aa7.36□□□□□ -1.23
CDC42SE1-202ENST00000439374 GCN1Q92616 2671 aaKnown RBP7.36□□□□□ -1.23
CDC42SE1-202ENST00000439374 IGHV3-30-3P0DP02 117 aa7.36□□□□□ -1.23
CDC42SE1-202ENST00000439374 GAGE2AQ6NT46 116 aa7.36□□□□□ -1.23
CDC42SE1-202ENST00000439374 CITED1Q99966 193 aa7.36□□□□□ -1.23
CDC42SE1-202ENST00000439374 EDA2RQ9HAV5 297 aa7.36□□□□□ -1.23
CDC42SE1-202ENST00000439374 XCL2Q9UBD3 114 aa7.36□□□□□ -1.23
CDC42SE1-202ENST00000439374 FLNBO75369 2602 aaKnown RBP7.35□□□□□ -1.23
CDC42SE1-202ENST00000439374 NSUN5P1Q3KNT7 163 aa7.35□□□□□ -1.23
CDC42SE1-202ENST00000439374 Q96MF0 132 aa7.35□□□□□ -1.23
CDC42SE1-202ENST00000439374 PPDPFQ9H3Y8 114 aa7.35□□□□□ -1.23
CDC42SE1-202ENST00000439374 TNFRSF18Q9Y5U5 241 aa7.35□□□□□ -1.23
CDC42SE1-202ENST00000439374 A0A0J9YXY3 114 aa7.35□□□□□ -1.23
CDC42SE1-202ENST00000439374 C9orf153Q5TBE3 101 aa7.35□□□□□ -1.23
CDC42SE1-202ENST00000439374 ICOSQ9Y6W8 199 aa7.35□□□□□ -1.23
CDC42SE1-202ENST00000439374 U3KQE9 123 aa7.35□□□□□ -1.23
CDC42SE1-202ENST00000439374 SVIPQ8NHG7 77 aa7.34□□□□□ -1.23
CDC42SE1-202ENST00000439374 IGKV3D-7A0A0C4DH55 119 aa7.34□□□□□ -1.23
CDC42SE1-202ENST00000439374 IGIPA6NJ69 53 aa7.34□□□□□ -1.23
CDC42SE1-202ENST00000439374 RHODO00212 210 aa7.34□□□□□ -1.23
CDC42SE1-202ENST00000439374 CFHR3Q02985 330 aa7.33□□□□□ -1.24
CDC42SE1-202ENST00000439374 F8P00451 2351 aa7.33□□□□□ -1.24
CDC42SE1-202ENST00000439374 ATP6V0E2Q8NHE4 81 aa7.33□□□□□ -1.24
CDC42SE1-202ENST00000439374 BBC3Q96PG8 261 aaPredicted RBP7.33□□□□□ -1.24
CDC42SE1-202ENST00000439374 ODF3Q96PU9 254 aa7.33□□□□□ -1.24
CDC42SE1-202ENST00000439374 IGHV1OR15-1A0A075B7D0 117 aa7.32□□□□□ -1.24
CDC42SE1-202ENST00000439374 TMEM263Q8WUH6 116 aaKnown RBP7.32□□□□□ -1.24
CDC42SE1-202ENST00000439374 MRPL53Q96EL3 112 aaKnown RBP7.32□□□□□ -1.24
CDC42SE1-202ENST00000439374 ITPR2Q14571 2701 aa7.32□□□□□ -1.24
CDC42SE1-202ENST00000439374 H7C423 109 aa7.32□□□□□ -1.24
CDC42SE1-202ENST00000439374 I3L3M4 83 aa7.32□□□□□ -1.24
CDC42SE1-202ENST00000439374 OR13C6PQ8NH95 151 aa7.32□□□□□ -1.24
CDC42SE1-202ENST00000439374 TINCRA0A1B0GVN0 87 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms