RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 CHD6Q8TD26 2715 aa7.8□□□□□ -1.16
SCAF4-203ENST00000434667 A0A1W2PRX2 142 aa7.8□□□□□ -1.16
SCAF4-203ENST00000434667 H3BUX3 64 aa7.8□□□□□ -1.16
SCAF4-203ENST00000434667 M0R1W7 72 aa7.8□□□□□ -1.16
SCAF4-203ENST00000434667 BLCAPP62952 87 aa7.8□□□□□ -1.16
SCAF4-203ENST00000434667 PAPPA-AS1Q5QFB9 102 aa7.8□□□□□ -1.16
SCAF4-203ENST00000434667 LINC01587Q99440 93 aa7.8□□□□□ -1.16
SCAF4-203ENST00000434667 BPESC1Q9GZL8 116 aa7.8□□□□□ -1.16
SCAF4-203ENST00000434667 CFHR3Q02985 330 aa7.79□□□□□ -1.16
SCAF4-203ENST00000434667 KLK9Q2XQG4 91 aa7.79□□□□□ -1.16
SCAF4-203ENST00000434667 C10orf99Q6UWK7 81 aa7.79□□□□□ -1.16
SCAF4-203ENST00000434667 SLC25A29Q8N8R3 303 aa7.79□□□□□ -1.16
SCAF4-203ENST00000434667 USP24Q9UPU5 2620 aa7.79□□□□□ -1.16
SCAF4-203ENST00000434667 CENPVL3A0A0U1RRI6 287 aa7.79□□□□□ -1.16
SCAF4-203ENST00000434667 PFN2P35080 140 aa7.79□□□□□ -1.16
SCAF4-203ENST00000434667 PRIMA1Q86XR5 153 aa7.79□□□□□ -1.16
SCAF4-203ENST00000434667 SIRPDQ9H106 197 aa7.79□□□□□ -1.16
SCAF4-203ENST00000434667 TRGV11A0A075B6L2 103 aa7.78□□□□□ -1.16
SCAF4-203ENST00000434667 SNRPD3P62318 126 aaKnown RBP7.78□□□□□ -1.16
SCAF4-203ENST00000434667 KIF25-AS1Q9Y6Z4 181 aa7.78□□□□□ -1.16
SCAF4-203ENST00000434667 IGHV3-33P01772 117 aa7.78□□□□□ -1.16
SCAF4-203ENST00000434667 UBE2E1P51965 193 aa7.78□□□□□ -1.16
SCAF4-203ENST00000434667 LINC00158P58513 81 aa7.78□□□□□ -1.16
SCAF4-203ENST00000434667 EBI3Q14213 229 aa7.77□□□□□ -1.17
SCAF4-203ENST00000434667 C5orf56Q8N8D9 126 aa7.77□□□□□ -1.17
SCAF4-203ENST00000434667 Q9HAA7 133 aa7.77□□□□□ -1.17
SCAF4-203ENST00000434667 MXRA5Q9NR99 2828 aa7.77□□□□□ -1.17
SCAF4-203ENST00000434667 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.77□□□□□ -1.17
SCAF4-203ENST00000434667 ADAMTSL4-AS1Q5T5F5 129 aa7.77□□□□□ -1.17
SCAF4-203ENST00000434667 U3KQE9 123 aa7.77□□□□□ -1.17
SCAF4-203ENST00000434667 NBPF19A0A087WUL8 3843 aa7.77□□□□□ -1.17
SCAF4-203ENST00000434667 NBL1P41271 181 aa7.77□□□□□ -1.17
SCAF4-203ENST00000434667 POLR2KP53803 58 aaKnown RBP7.77□□□□□ -1.17
SCAF4-203ENST00000434667 C9orf139Q6ZV77 190 aa7.77□□□□□ -1.17
SCAF4-203ENST00000434667 ATP6V0E2Q8NHE4 81 aa7.77□□□□□ -1.17
SCAF4-203ENST00000434667 TRIAP1O43715 76 aa7.76□□□□□ -1.17
SCAF4-203ENST00000434667 MINOS1Q5TGZ0 78 aa7.76□□□□□ -1.17
SCAF4-203ENST00000434667 DYNLRB2Q8TF09 96 aa7.76□□□□□ -1.17
SCAF4-203ENST00000434667 TMEM263Q8WUH6 116 aaKnown RBP7.76□□□□□ -1.17
SCAF4-203ENST00000434667 TMEM101Q96IK0 257 aa7.76□□□□□ -1.17
SCAF4-203ENST00000434667 SOCS3O14543 225 aa7.76□□□□□ -1.17
SCAF4-203ENST00000434667 ADORA2A-AS1P86434 159 aa7.76□□□□□ -1.17
SCAF4-203ENST00000434667 KLK5Q9Y337 293 aaPredicted RBP7.76□□□□□ -1.17
SCAF4-203ENST00000434667 TRBV7-1A0A0A6YYK4 115 aa7.75□□□□□ -1.17
SCAF4-203ENST00000434667 PAX4O43316 350 aa7.75□□□□□ -1.17
SCAF4-203ENST00000434667 LINC01619G3V211 115 aa7.75□□□□□ -1.17
SCAF4-203ENST00000434667 RPL32P62910 135 aaKnown RBP7.75□□□□□ -1.17
SCAF4-203ENST00000434667 OVOL1O14753 267 aa7.75□□□□□ -1.17
SCAF4-203ENST00000434667 UBE2L6O14933 153 aa7.75□□□□□ -1.17
SCAF4-203ENST00000434667 NXPH4O95158 308 aa7.75□□□□□ -1.17
SCAF4-203ENST00000434667 ZNF22P17026 224 aaPredicted RBP7.75□□□□□ -1.17
SCAF4-203ENST00000434667 NF1P21359 2839 aa7.74□□□□□ -1.17
SCAF4-203ENST00000434667 IGHV4-38-2P0DP08 117 aa7.74□□□□□ -1.17
SCAF4-203ENST00000434667 LY6DQ14210 128 aa7.74□□□□□ -1.17
SCAF4-203ENST00000434667 XCL2Q9UBD3 114 aa7.74□□□□□ -1.17
SCAF4-203ENST00000434667 MINOS1-NBL1R4GNA1 71 aa7.74□□□□□ -1.17
SCAF4-203ENST00000434667 NSUN5P1Q3KNT7 163 aa7.74□□□□□ -1.17
SCAF4-203ENST00000434667 C11orf71Q6IPW1 123 aa7.74□□□□□ -1.17
SCAF4-203ENST00000434667 SVIPQ8NHG7 77 aa7.74□□□□□ -1.17
SCAF4-203ENST00000434667 ODF3Q96PU9 254 aa7.74□□□□□ -1.17
SCAF4-203ENST00000434667 DEFB131AP59861 70 aa7.73□□□□□ -1.17
SCAF4-203ENST00000434667 ATP5J2P56134 94 aa7.73□□□□□ -1.17
SCAF4-203ENST00000434667 Q9H8V8 135 aa7.73□□□□□ -1.17
SCAF4-203ENST00000434667 TRGV1A0A0A0MS02 117 aa7.73□□□□□ -1.17
SCAF4-203ENST00000434667 A0A0J9YXY3 114 aa7.73□□□□□ -1.17
SCAF4-203ENST00000434667 TMEM223A0PJW6 202 aa7.73□□□□□ -1.17
SCAF4-203ENST00000434667 DEFB136Q30KP8 78 aa7.73□□□□□ -1.17
SCAF4-203ENST00000434667 RHODO00212 210 aa7.72□□□□□ -1.17
SCAF4-203ENST00000434667 SBSPONQ8IVN8 264 aa7.72□□□□□ -1.17
SCAF4-203ENST00000434667 ATP5G1P05496 136 aa7.72□□□□□ -1.17
SCAF4-203ENST00000434667 IGHV3-30-3P0DP02 117 aa7.72□□□□□ -1.17
SCAF4-203ENST00000434667 TMEM190Q8WZ59 177 aa7.72□□□□□ -1.17
SCAF4-203ENST00000434667 ICOSQ9Y6W8 199 aa7.72□□□□□ -1.17
SCAF4-203ENST00000434667 OOSP1A8MZH6 123 aa7.72□□□□□ -1.17
SCAF4-203ENST00000434667 RHOHQ15669 191 aa7.72□□□□□ -1.17
SCAF4-203ENST00000434667 MRPL53Q96EL3 112 aaKnown RBP7.72□□□□□ -1.17
SCAF4-203ENST00000434667 LOC107984640A0A0U1RRK4 108 aa7.71□□□□□ -1.17
SCAF4-203ENST00000434667 M0QY20 66 aa7.71□□□□□ -1.17
SCAF4-203ENST00000434667 BAALC-AS2P0C853 105 aa7.71□□□□□ -1.17
SCAF4-203ENST00000434667 CLPSL2Q6UWE3 100 aa7.71□□□□□ -1.17
SCAF4-203ENST00000434667 IGLV4-3A0A075B6K6 122 aa7.71□□□□□ -1.18
SCAF4-203ENST00000434667 TRGV2A0A075B6R0 118 aa7.71□□□□□ -1.18
SCAF4-203ENST00000434667 PRB2P02812 416 aaPredicted RBP7.71□□□□□ -1.18
SCAF4-203ENST00000434667 LMO4P61968 165 aa7.71□□□□□ -1.18
SCAF4-203ENST00000434667 MOB4Q9Y3A3 225 aa7.71□□□□□ -1.18
SCAF4-203ENST00000434667 CFAP46Q8IYW2 2715 aa7.7□□□□□ -1.18
SCAF4-203ENST00000434667 NBEAL2Q6ZNJ1 2754 aa7.7□□□□□ -1.18
SCAF4-203ENST00000434667 A0A096LPF7 62 aa7.7□□□□□ -1.18
SCAF4-203ENST00000434667 FAM19A4Q96LR4 140 aa7.7□□□□□ -1.18
SCAF4-203ENST00000434667 H7C423 109 aa7.7□□□□□ -1.18
SCAF4-203ENST00000434667 NDUFA7O95182 113 aa7.69□□□□□ -1.18
SCAF4-203ENST00000434667 SDIM1Q6ZPB5 146 aa7.69□□□□□ -1.18
SCAF4-203ENST00000434667 Q6ZSN1 163 aa7.69□□□□□ -1.18
SCAF4-203ENST00000434667 IGHV4OR15-8A0A075B7B6 117 aa7.69□□□□□ -1.18
SCAF4-203ENST00000434667 A0A087WW49 117 aa7.69□□□□□ -1.18
SCAF4-203ENST00000434667 I3L3M4 83 aa7.69□□□□□ -1.18
SCAF4-203ENST00000434667 LEPROTO15243 131 aa7.69□□□□□ -1.18
SCAF4-203ENST00000434667 TIMM17AQ99595 171 aa7.69□□□□□ -1.18
SCAF4-203ENST00000434667 TRBV27A0A0K0K1C4 114 aa7.69□□□□□ -1.18
SCAF4-203ENST00000434667 LGALS9O00182 355 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 189 ms