RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 FHL3Q13643 280 aa5.45□□□□□ -1.54
COL17A1-204ENST00000433822 ZNF876PQ49A33 203 aa5.45□□□□□ -1.54
COL17A1-204ENST00000433822 Q6ZVH6 145 aa5.45□□□□□ -1.54
COL17A1-204ENST00000433822 DLX4Q92988 240 aaPredicted RBP5.45□□□□□ -1.54
COL17A1-204ENST00000433822 DNAJC30Q96LL9 226 aa5.45□□□□□ -1.54
COL17A1-204ENST00000433822 FAM110AQ9BQ89 295 aa5.45□□□□□ -1.54
COL17A1-204ENST00000433822 SPANXB1Q9NS25 103 aaPredicted RBP5.45□□□□□ -1.54
COL17A1-204ENST00000433822 TP53TG1Q9Y2A0 90 aa5.45□□□□□ -1.54
COL17A1-204ENST00000433822 IGLV4-69A0A075B6H9 119 aa5.44□□□□□ -1.54
COL17A1-204ENST00000433822 INAFM1C9JVW0 142 aa5.44□□□□□ -1.54
COL17A1-204ENST00000433822 I3L3M4 83 aa5.44□□□□□ -1.54
COL17A1-204ENST00000433822 M0R2P5 195 aa5.44□□□□□ -1.54
COL17A1-204ENST00000433822 LY6G6DO95868 133 aa5.44□□□□□ -1.54
COL17A1-204ENST00000433822 TSHBP01222 138 aa5.44□□□□□ -1.54
COL17A1-204ENST00000433822 FABP2P12104 132 aa5.44□□□□□ -1.54
COL17A1-204ENST00000433822 GCSHP23434 173 aa5.44□□□□□ -1.54
COL17A1-204ENST00000433822 FXYD2P54710 66 aa5.44□□□□□ -1.54
COL17A1-204ENST00000433822 SCGB2A2Q13296 93 aa5.44□□□□□ -1.54
COL17A1-204ENST00000433822 SPINK13Q1W4C9 94 aa5.44□□□□□ -1.54
COL17A1-204ENST00000433822 BEAN1Q3B7T3 259 aa5.44□□□□□ -1.54
COL17A1-204ENST00000433822 MORN3Q6PF18 240 aaPredicted RBP5.44□□□□□ -1.54
COL17A1-204ENST00000433822 C20orf203Q8NBC4 194 aa5.44□□□□□ -1.54
COL17A1-204ENST00000433822 Q96MF0 132 aa5.44□□□□□ -1.54
COL17A1-204ENST00000433822 CST9LQ9H4G1 147 aa5.44□□□□□ -1.54
COL17A1-204ENST00000433822 GAGE12BA1L429 117 aa5.43□□□□□ -1.54
COL17A1-204ENST00000433822 F5H697 171 aa5.43□□□□□ -1.54
COL17A1-204ENST00000433822 H3BUT2 72 aa5.43□□□□□ -1.54
COL17A1-204ENST00000433822 K7ERU9 68 aa5.43□□□□□ -1.54
COL17A1-204ENST00000433822 DEFB131AP59861 70 aa5.43□□□□□ -1.54
COL17A1-204ENST00000433822 ZNF56Q15929 161 aa5.43□□□□□ -1.54
COL17A1-204ENST00000433822 DEFB114Q30KQ6 69 aa5.43□□□□□ -1.54
COL17A1-204ENST00000433822 MAPKAPK5-AS1Q8N8E1 139 aa5.43□□□□□ -1.54
COL17A1-204ENST00000433822 DUX5Q96PT3 197 aa5.43□□□□□ -1.54
COL17A1-204ENST00000433822 PRADC1Q9BSG0 188 aa5.43□□□□□ -1.54
COL17A1-204ENST00000433822 C16orf95Q9H693 158 aa5.43□□□□□ -1.54
COL17A1-204ENST00000433822 TENM1Q9UKZ4 2725 aa5.43□□□□□ -1.54
COL17A1-204ENST00000433822 TRAV12-2A0A075B6T6 113 aa5.42□□□□□ -1.54
COL17A1-204ENST00000433822 A0A087WWL8 130 aa5.42□□□□□ -1.54
COL17A1-204ENST00000433822 CIDEAO60543 219 aa5.42□□□□□ -1.54
COL17A1-204ENST00000433822 RBX1P62877 108 aa5.42□□□□□ -1.54
COL17A1-204ENST00000433822 OCIAD2Q56VL3 154 aa5.42□□□□□ -1.54
COL17A1-204ENST00000433822 TMEM61Q8N0U2 210 aa5.42□□□□□ -1.54
COL17A1-204ENST00000433822 DYNLRB2Q8TF09 96 aa5.42□□□□□ -1.54
COL17A1-204ENST00000433822 RAX2Q96IS3 184 aa5.42□□□□□ -1.54
COL17A1-204ENST00000433822 HIST1H4GQ99525 98 aa5.42□□□□□ -1.54
COL17A1-204ENST00000433822 JPT2Q9H910 190 aa5.42□□□□□ -1.54
COL17A1-204ENST00000433822 MAP6D1Q9H9H5 199 aa5.42□□□□□ -1.54
COL17A1-204ENST00000433822 SPANXA1Q9NS26 97 aa5.42□□□□□ -1.54
COL17A1-204ENST00000433822 SPCS1Q9Y6A9 102 aa5.42□□□□□ -1.54
COL17A1-204ENST00000433822 RYR3Q15413 4870 aa5.41□□□□□ -1.54
COL17A1-204ENST00000433822 ZNF815PA8K554 130 aa5.41□□□□□ -1.54
COL17A1-204ENST00000433822 INSP01308 110 aa5.41□□□□□ -1.54
COL17A1-204ENST00000433822 IGHV3-53P01767 116 aa5.41□□□□□ -1.54
COL17A1-204ENST00000433822 RBMY1A1P0DJD3 496 aaKnown RBP5.41□□□□□ -1.54
COL17A1-204ENST00000433822 RBMY1CP0DJD4 496 aa5.41□□□□□ -1.54
COL17A1-204ENST00000433822 P0DMU3 169 aa5.41□□□□□ -1.54
COL17A1-204ENST00000433822 FAM231AP0DMU4 169 aa5.41□□□□□ -1.54
COL17A1-204ENST00000433822 FAM231CP0DMU5 169 aa5.41□□□□□ -1.54
COL17A1-204ENST00000433822 UBE2D1P51668 147 aa5.41□□□□□ -1.54
COL17A1-204ENST00000433822 RBMY1FQ15415 496 aaKnown RBP5.41□□□□□ -1.54
COL17A1-204ENST00000433822 C12orf74Q32Q52 190 aa5.41□□□□□ -1.54
COL17A1-204ENST00000433822 LYRM7Q5U5X0 104 aa5.41□□□□□ -1.54
COL17A1-204ENST00000433822 Q6ZSV7 163 aa5.41□□□□□ -1.54
COL17A1-204ENST00000433822 NEGR1Q7Z3B1 354 aa5.41□□□□□ -1.54
COL17A1-204ENST00000433822 C11orf72Q8NBR9 251 aa5.41□□□□□ -1.54
COL17A1-204ENST00000433822 MAPK1IP1LQ8NDC0 245 aa5.41□□□□□ -1.54
COL17A1-204ENST00000433822 RNASE8Q8TDE3 154 aaKnown RBP5.41□□□□□ -1.54
COL17A1-204ENST00000433822 PLEKHB2Q96CS7 222 aa5.41□□□□□ -1.54
COL17A1-204ENST00000433822 AMELXQ99217 191 aa5.41□□□□□ -1.54
COL17A1-204ENST00000433822 TIMM21Q9BVV7 248 aa5.41□□□□□ -1.54
COL17A1-204ENST00000433822 TTTY13Q9BZ97 58 aa5.41□□□□□ -1.54
COL17A1-204ENST00000433822 AGRNO00468 2067 aa5.41□□□□□ -1.54
COL17A1-204ENST00000433822 KMT2CQ8NEZ4 4911 aaKnown RBP5.4□□□□□ -1.54
COL17A1-204ENST00000433822 RBMY1BA6NDE4 496 aaKnown RBP5.4□□□□□ -1.54
COL17A1-204ENST00000433822 RBMY1EA6NEQ0 496 aaKnown RBP5.4□□□□□ -1.54
COL17A1-204ENST00000433822 DNAJC9-AS1A6NH13 148 aa5.4□□□□□ -1.54
COL17A1-204ENST00000433822 KNCNA6PVL3 124 aa5.4□□□□□ -1.54
COL17A1-204ENST00000433822 IGLL5B9A064 214 aa5.4□□□□□ -1.54
COL17A1-204ENST00000433822 LEPROTO15243 131 aa5.4□□□□□ -1.54
COL17A1-204ENST00000433822 SPRY2O43597 315 aa5.4□□□□□ -1.54
COL17A1-204ENST00000433822 RBMY1DP0C7P1 496 aaKnown RBP5.4□□□□□ -1.54
COL17A1-204ENST00000433822 MRPS36P82909 103 aaKnown RBP5.4□□□□□ -1.54
COL17A1-204ENST00000433822 FAM74A4Q5TZK3 123 aa5.4□□□□□ -1.54
COL17A1-204ENST00000433822 KLHL30-AS1Q8NEE0 82 aa5.4□□□□□ -1.54
COL17A1-204ENST00000433822 IL17DQ8TAD2 202 aa5.4□□□□□ -1.54
COL17A1-204ENST00000433822 NHP2Q9NX24 153 aaKnown RBP5.4□□□□□ -1.54
COL17A1-204ENST00000433822 IGLV4-3A0A075B6K6 122 aa5.39□□□□□ -1.55
COL17A1-204ENST00000433822 A0A0J9YY99 117 aa5.39□□□□□ -1.55
COL17A1-204ENST00000433822 TRBV10-1A0A0K0K1A3 114 aa5.39□□□□□ -1.55
COL17A1-204ENST00000433822 TMEM223A0PJW6 202 aa5.39□□□□□ -1.55
COL17A1-204ENST00000433822 F8W1H4 67 aa5.39□□□□□ -1.55
COL17A1-204ENST00000433822 J3QQQ9 107 aa5.39□□□□□ -1.55
COL17A1-204ENST00000433822 RS1O15537 224 aa5.39□□□□□ -1.55
COL17A1-204ENST00000433822 IGKV3-20P01619 116 aa5.39□□□□□ -1.55
COL17A1-204ENST00000433822 RPL39P62891 51 aaKnown RBP5.39□□□□□ -1.55
COL17A1-204ENST00000433822 SMAGPQ0VAQ4 97 aa5.39□□□□□ -1.55
COL17A1-204ENST00000433822 RRN3P1Q2M238 152 aa5.39□□□□□ -1.55
COL17A1-204ENST00000433822 SLC25A29Q8N8R3 303 aa5.39□□□□□ -1.55
COL17A1-204ENST00000433822 ZNF479Q96JC4 524 aa5.39□□□□□ -1.55
COL17A1-204ENST00000433822 DUX3Q96PT4 197 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms