RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 NCR2O95944 276 aa-1.11□□□□□ -2.59
LINC01239-201ENST00000433645 S100A3P33764 101 aa-1.11□□□□□ -2.59
LINC01239-201ENST00000433645 UBE2G1P62253 170 aa-1.11□□□□□ -2.59
LINC01239-201ENST00000433645 ARHGEF10O15013 1369 aa-1.11□□□□□ -2.59
LINC01239-201ENST00000433645 PRDM2Q13029 1718 aa-1.12□□□□□ -2.59
LINC01239-201ENST00000433645 TSPAN19P0C672 248 aa-1.12□□□□□ -2.59
LINC01239-201ENST00000433645 PIPP12273 146 aaPredicted RBP-1.12□□□□□ -2.59
LINC01239-201ENST00000433645 CBLN1P23435 193 aa-1.12□□□□□ -2.59
LINC01239-201ENST00000433645 CTAGE3PQ8IX95 158 aa-1.12□□□□□ -2.59
LINC01239-201ENST00000433645 SELENOSQ9BQE4 189 aa-1.12□□□□□ -2.59
LINC01239-201ENST00000433645 MRPL40Q9NQ50 206 aaKnown RBP-1.12□□□□□ -2.59
LINC01239-201ENST00000433645 FAM236AA0A1B0GUQ0 79 aa-1.13□□□□□ -2.59
LINC01239-201ENST00000433645 FAM236BA0A1B0GV22 79 aa-1.13□□□□□ -2.59
LINC01239-201ENST00000433645 BCE1O60756 84 aa-1.13□□□□□ -2.59
LINC01239-201ENST00000433645 PITX3O75364 302 aa-1.13□□□□□ -2.59
LINC01239-201ENST00000433645 IGLC6P0CF74 106 aa-1.13□□□□□ -2.59
LINC01239-201ENST00000433645 CCL18P55774 89 aa-1.13□□□□□ -2.59
LINC01239-201ENST00000433645 CCL8P80075 99 aa-1.13□□□□□ -2.59
LINC01239-201ENST00000433645 TP53AIP1Q9HCN2 124 aa-1.13□□□□□ -2.59
LINC01239-201ENST00000433645 DCDP81605 110 aaKnown RBP-1.14□□□□□ -2.59
LINC01239-201ENST00000433645 HIST1H1AQ02539 215 aaPredicted RBP-1.14□□□□□ -2.59
LINC01239-201ENST00000433645 SCIMPQ6UWF3 145 aa-1.14□□□□□ -2.59
LINC01239-201ENST00000433645 Q6ZUT4 128 aa-1.14□□□□□ -2.59
LINC01239-201ENST00000433645 NPVFQ9HCQ7 196 aa-1.14□□□□□ -2.59
LINC01239-201ENST00000433645 PRG4Q92954 1404 aaPredicted RBP-1.15□□□□□ -2.59
LINC01239-201ENST00000433645 ERCC6L2Q5T890 1561 aa-1.15□□□□□ -2.59
LINC01239-201ENST00000433645 I3L2K1 104 aa-1.15□□□□□ -2.59
LINC01239-201ENST00000433645 K7EQZ3 153 aa-1.15□□□□□ -2.59
LINC01239-201ENST00000433645 IL5P05113 134 aa-1.15□□□□□ -2.59
LINC01239-201ENST00000433645 SCGB1A1P11684 91 aa-1.15□□□□□ -2.59
LINC01239-201ENST00000433645 ALX1Q15699 326 aa-1.15□□□□□ -2.59
LINC01239-201ENST00000433645 LINC00312Q9Y6C7 94 aa-1.15□□□□□ -2.59
LINC01239-201ENST00000433645 PRKDCP78527 4128 aaKnown RBP-1.16□□□□□ -2.59
LINC01239-201ENST00000433645 NF1P21359 2839 aa-1.16□□□□□ -2.6
LINC01239-201ENST00000433645 SMIM4Q8WVI0 70 aa-1.16□□□□□ -2.6
LINC01239-201ENST00000433645 PSMG3Q9BT73 122 aaPredicted RBP-1.16□□□□□ -2.6
LINC01239-201ENST00000433645 RRAS2P62070 204 aaPredicted RBP-1.17□□□□□ -2.6
LINC01239-201ENST00000433645 TAC4Q86UU9 113 aa-1.17□□□□□ -2.6
LINC01239-201ENST00000433645 AIF1LQ9BQI0 150 aa-1.17□□□□□ -2.6
LINC01239-201ENST00000433645 R4GMQ9 66 aa-1.17□□□□□ -2.6
LINC01239-201ENST00000433645 CASKIN1Q8WXD9 1431 aa-1.17□□□□□ -2.6
LINC01239-201ENST00000433645 TSC2P49815 1807 aa-1.17□□□□□ -2.6
LINC01239-201ENST00000433645 CNOT1A5YKK6 2376 aaKnown RBP-1.18□□□□□ -2.6
LINC01239-201ENST00000433645 PI4KAP42356 2102 aa-1.18□□□□□ -2.6
LINC01239-201ENST00000433645 URB1O60287 2271 aaKnown RBP-1.18□□□□□ -2.6
LINC01239-201ENST00000433645 M0R129 80 aa-1.18□□□□□ -2.6
LINC01239-201ENST00000433645 NDUFB6O95139 128 aa-1.18□□□□□ -2.6
LINC01239-201ENST00000433645 SPTSSBQ8NFR3 76 aa-1.18□□□□□ -2.6
LINC01239-201ENST00000433645 SPTSSAQ969W0 71 aa-1.18□□□□□ -2.6
LINC01239-201ENST00000433645 GSKIPQ9P0R6 139 aa-1.18□□□□□ -2.6
LINC01239-201ENST00000433645 IFT140Q96RY7 1462 aa-1.18□□□□□ -2.6
LINC01239-201ENST00000433645 PAPPAQ13219 1627 aa-1.18□□□□□ -2.6
LINC01239-201ENST00000433645 J3QR89 54 aa-1.19□□□□□ -2.6
LINC01239-201ENST00000433645 NEFHP12036 1026 aa-1.19□□□□□ -2.6
LINC01239-201ENST00000433645 TRBV6-1A0A0K0K1D8 114 aa-1.2□□□□□ -2.6
LINC01239-201ENST00000433645 SPAARA0A1B0GVQ0 90 aa-1.2□□□□□ -2.6
LINC01239-201ENST00000433645 SIX6O95475 246 aa-1.2□□□□□ -2.6
LINC01239-201ENST00000433645 LINC00694P0DN24 101 aa-1.2□□□□□ -2.6
LINC01239-201ENST00000433645 HAMPP81172 84 aa-1.2□□□□□ -2.6
LINC01239-201ENST00000433645 PIGYQ3MUY2 71 aa-1.2□□□□□ -2.6
LINC01239-201ENST00000433645 AGPAT4-IT1Q9H0P7 198 aa-1.21□□□□□ -2.6
LINC01239-201ENST00000433645 CREBBPQ92793 2442 aa-1.21□□□□□ -2.6
LINC01239-201ENST00000433645 SBF2Q86WG5 1849 aa-1.22□□□□□ -2.6
LINC01239-201ENST00000433645 MRC1P22897 1456 aa-1.22□□□□□ -2.6
LINC01239-201ENST00000433645 ZNF518AQ6AHZ1 1483 aa-1.22□□□□□ -2.6
LINC01239-201ENST00000433645 M0R135 149 aa-1.22□□□□□ -2.6
LINC01239-201ENST00000433645 SNCGO76070 127 aa-1.22□□□□□ -2.6
LINC01239-201ENST00000433645 PPP1R17O96001 155 aa-1.22□□□□□ -2.6
LINC01239-201ENST00000433645 GUCA1AP43080 201 aaPredicted RBP-1.22□□□□□ -2.6
LINC01239-201ENST00000433645 HERC1Q15751 4861 aa-1.22□□□□□ -2.61
LINC01239-201ENST00000433645 GOLGA4Q13439 2230 aaKnown RBP-1.23□□□□□ -2.61
LINC01239-201ENST00000433645 WDR7Q9Y4E6 1490 aa-1.23□□□□□ -2.61
LINC01239-201ENST00000433645 FXYD6-FXYD2A0A087WZ82 144 aa-1.23□□□□□ -2.61
LINC01239-201ENST00000433645 SPAG11AQ6PDA7 123 aa-1.23□□□□□ -2.61
LINC01239-201ENST00000433645 ZNF236Q9UL36 1845 aa-1.24□□□□□ -2.61
LINC01239-201ENST00000433645 FLGP20930 4061 aaPredicted RBP-1.24□□□□□ -2.61
LINC01239-201ENST00000433645 COX6B1P14854 86 aa-1.24□□□□□ -2.61
LINC01239-201ENST00000433645 COX17Q14061 63 aa-1.24□□□□□ -2.61
LINC01239-201ENST00000433645 SEC11CQ9BY50 192 aa-1.24□□□□□ -2.61
LINC01239-201ENST00000433645 SMIM3Q9BZL3 60 aa-1.24□□□□□ -2.61
LINC01239-201ENST00000433645 LENEPQ9Y5L5 61 aa-1.24□□□□□ -2.61
LINC01239-201ENST00000433645 TGP01266 2768 aa-1.24□□□□□ -2.61
LINC01239-201ENST00000433645 PATJQ8NI35 1801 aa-1.24□□□□□ -2.61
LINC01239-201ENST00000433645 DOCK2Q92608 1830 aa-1.24□□□□□ -2.61
LINC01239-201ENST00000433645 SPEF2Q9C093 1822 aa-1.24□□□□□ -2.61
LINC01239-201ENST00000433645 FHAD1B1AJZ9 1412 aa-1.24□□□□□ -2.61
LINC01239-201ENST00000433645 M0R2Z0 102 aa-1.25□□□□□ -2.61
LINC01239-201ENST00000433645 B2MP61769 119 aa-1.25□□□□□ -2.61
LINC01239-201ENST00000433645 S100A7L2Q5SY68 101 aa-1.25□□□□□ -2.61
LINC01239-201ENST00000433645 AMELXQ99217 191 aa-1.25□□□□□ -2.61
LINC01239-201ENST00000433645 KMT2CQ8NEZ4 4911 aaKnown RBP-1.25□□□□□ -2.61
LINC01239-201ENST00000433645 DNAJC13O75165 2243 aa-1.25□□□□□ -2.61
LINC01239-201ENST00000433645 PKHD1P08F94 4074 aa-1.26□□□□□ -2.61
LINC01239-201ENST00000433645 CTXND1A0A1B0GTU2 59 aa-1.26□□□□□ -2.61
LINC01239-201ENST00000433645 CKS1BP61024 79 aa-1.26□□□□□ -2.61
LINC01239-201ENST00000433645 PYDC1Q8WXC3 89 aa-1.26□□□□□ -2.61
LINC01239-201ENST00000433645 SDF2Q99470 211 aa-1.26□□□□□ -2.61
LINC01239-201ENST00000433645 DOCK1Q14185 1865 aa-1.26□□□□□ -2.61
LINC01239-201ENST00000433645 LOC730098B7Z3J9 87 aa-1.27□□□□□ -2.61
LINC01239-201ENST00000433645 HCG22E2RYF7 251 aa-1.27□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms