RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 GAGE12BA1L429 117 aa7.47□□□□□ -1.21
HDAC9-210ENST00000428307 PLAC8L1A1L4L8 177 aa7.47□□□□□ -1.21
HDAC9-210ENST00000428307 GAGE7O76087 117 aa7.47□□□□□ -1.21
HDAC9-210ENST00000428307 GAGE12FP0CL80 117 aa7.47□□□□□ -1.21
HDAC9-210ENST00000428307 GAGE12GP0CL81 117 aa7.47□□□□□ -1.21
HDAC9-210ENST00000428307 GAGE12IP0CL82 117 aa7.47□□□□□ -1.21
HDAC9-210ENST00000428307 TMEM97Q5BJF2 176 aa7.47□□□□□ -1.21
HDAC9-210ENST00000428307 CITED1Q99966 193 aa7.47□□□□□ -1.21
HDAC9-210ENST00000428307 IGLV4-69A0A075B6H9 119 aa7.46□□□□□ -1.21
HDAC9-210ENST00000428307 C11orf86A6NJI1 115 aa7.46□□□□□ -1.21
HDAC9-210ENST00000428307 ZNRF2Q8NHG8 242 aa7.46□□□□□ -1.21
HDAC9-210ENST00000428307 TRGV2A0A075B6R0 118 aa7.46□□□□□ -1.22
HDAC9-210ENST00000428307 INSL3P51460 131 aa7.46□□□□□ -1.22
HDAC9-210ENST00000428307 DAZ2Q13117 558 aaKnown RBP7.46□□□□□ -1.22
HDAC9-210ENST00000428307 C9orf66Q5T8R8 295 aa7.46□□□□□ -1.22
HDAC9-210ENST00000428307 C16orf74Q96GX8 76 aa7.46□□□□□ -1.22
HDAC9-210ENST00000428307 TRBV25-1A0A075B6N4 114 aa7.45□□□□□ -1.22
HDAC9-210ENST00000428307 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.45□□□□□ -1.22
HDAC9-210ENST00000428307 IGKV2-29A2NJV5 120 aaPredicted RBP7.45□□□□□ -1.22
HDAC9-210ENST00000428307 SIVA1O15304 175 aa7.45□□□□□ -1.22
HDAC9-210ENST00000428307 RNASE13Q5GAN3 156 aaKnown RBP7.45□□□□□ -1.22
HDAC9-210ENST00000428307 TMEM170BQ5T4T1 132 aa7.45□□□□□ -1.22
HDAC9-210ENST00000428307 SLC25A29Q8N8R3 303 aa7.45□□□□□ -1.22
HDAC9-210ENST00000428307 OR11H2Q8NH07 326 aa7.45□□□□□ -1.22
HDAC9-210ENST00000428307 VCX2Q9H322 139 aa7.45□□□□□ -1.22
HDAC9-210ENST00000428307 IGLV4-3A0A075B6K6 122 aa7.44□□□□□ -1.22
HDAC9-210ENST00000428307 DNAJC30Q96LL9 226 aa7.44□□□□□ -1.22
HDAC9-210ENST00000428307 TRBV7-3A0A075B6L6 115 aa7.44□□□□□ -1.22
HDAC9-210ENST00000428307 TRAV4A0A0B4J268 109 aa7.44□□□□□ -1.22
HDAC9-210ENST00000428307 COTL1Q14019 142 aa7.44□□□□□ -1.22
HDAC9-210ENST00000428307 PRADC1Q9BSG0 188 aa7.44□□□□□ -1.22
HDAC9-210ENST00000428307 CHCHD7Q9BUK0 85 aa7.44□□□□□ -1.22
HDAC9-210ENST00000428307 HSD52Q0P140 79 aa7.43□□□□□ -1.22
HDAC9-210ENST00000428307 CHAC1Q9BUX1 264 aa7.43□□□□□ -1.22
HDAC9-210ENST00000428307 GAGE12JA6NER3 117 aa7.42□□□□□ -1.22
HDAC9-210ENST00000428307 E9PLD3 99 aa7.42□□□□□ -1.22
HDAC9-210ENST00000428307 K7EQD1 137 aa7.42□□□□□ -1.22
HDAC9-210ENST00000428307 GAGE1Q13065 139 aa7.42□□□□□ -1.22
HDAC9-210ENST00000428307 GAGE4Q13068 117 aa7.42□□□□□ -1.22
HDAC9-210ENST00000428307 GAGE5Q13069 117 aa7.42□□□□□ -1.22
HDAC9-210ENST00000428307 GAGE13Q4V321 117 aa7.42□□□□□ -1.22
HDAC9-210ENST00000428307 FAM104AQ969W3 186 aa7.42□□□□□ -1.22
HDAC9-210ENST00000428307 A0A0J9YXV3 536 aa7.42□□□□□ -1.22
HDAC9-210ENST00000428307 K7EP13 123 aa7.42□□□□□ -1.22
HDAC9-210ENST00000428307 DEFB130BP0DP73 79 aa7.42□□□□□ -1.22
HDAC9-210ENST00000428307 DEFB130AP0DP74 79 aa7.42□□□□□ -1.22
HDAC9-210ENST00000428307 RPL36AP83881 106 aaKnown RBP7.42□□□□□ -1.22
HDAC9-210ENST00000428307 PAPPA-AS1Q5QFB9 102 aa7.42□□□□□ -1.22
HDAC9-210ENST00000428307 LINC00469Q8N7U9 141 aa7.42□□□□□ -1.22
HDAC9-210ENST00000428307 ORAOV1Q8WV07 137 aa7.42□□□□□ -1.22
HDAC9-210ENST00000428307 RPL36ALQ969Q0 106 aaKnown RBP7.42□□□□□ -1.22
HDAC9-210ENST00000428307 COX11Q9Y6N1 276 aa7.42□□□□□ -1.22
HDAC9-210ENST00000428307 TAX1BP3O14907 124 aa7.41□□□□□ -1.22
HDAC9-210ENST00000428307 GCSHP23434 173 aa7.41□□□□□ -1.22
HDAC9-210ENST00000428307 OVOL2Q9BRP0 275 aa7.41□□□□□ -1.22
HDAC9-210ENST00000428307 PYGO1Q9Y3Y4 419 aa7.41□□□□□ -1.22
HDAC9-210ENST00000428307 FBN1P35555 2871 aaKnown RBP7.41□□□□□ -1.22
HDAC9-210ENST00000428307 LOC100131303A0A0U1RQF7 123 aa7.41□□□□□ -1.22
HDAC9-210ENST00000428307 MYMXA0A1B0GTQ4 84 aa7.41□□□□□ -1.22
HDAC9-210ENST00000428307 SVIPQ8NHG7 77 aa7.41□□□□□ -1.22
HDAC9-210ENST00000428307 UBE2D4Q9Y2X8 147 aa7.41□□□□□ -1.22
HDAC9-210ENST00000428307 IGHV3-64A0A075B6Q5 118 aa7.4□□□□□ -1.22
HDAC9-210ENST00000428307 TRGV4A0A0C4DH28 118 aa7.4□□□□□ -1.22
HDAC9-210ENST00000428307 SEC11AP67812 179 aa7.4□□□□□ -1.22
HDAC9-210ENST00000428307 HIGD1BQ9P298 99 aa7.4□□□□□ -1.22
HDAC9-210ENST00000428307 TRBV10-1A0A0K0K1A3 114 aa7.4□□□□□ -1.23
HDAC9-210ENST00000428307 ZNF815PA8K554 130 aa7.4□□□□□ -1.23
HDAC9-210ENST00000428307 NPSP0C0P6 89 aa7.4□□□□□ -1.23
HDAC9-210ENST00000428307 STAB1Q9NY15 2570 aa7.39□□□□□ -1.23
HDAC9-210ENST00000428307 FXYD2P54710 66 aa7.39□□□□□ -1.23
HDAC9-210ENST00000428307 HERVK_113P61574 105 aa7.39□□□□□ -1.23
HDAC9-210ENST00000428307 DEFB135Q30KP9 77 aa7.39□□□□□ -1.23
HDAC9-210ENST00000428307 DGAT2L7PQ6IED9 249 aa7.39□□□□□ -1.23
HDAC9-210ENST00000428307 AMELXQ99217 191 aa7.39□□□□□ -1.23
HDAC9-210ENST00000428307 DEFB4AO15263 64 aa7.39□□□□□ -1.23
HDAC9-210ENST00000428307 LINC00694P0DN24 101 aa7.39□□□□□ -1.23
HDAC9-210ENST00000428307 SCGB1D4Q6XE38 83 aa7.39□□□□□ -1.23
HDAC9-210ENST00000428307 NTM-AS1Q6ZSK4 140 aa7.39□□□□□ -1.23
HDAC9-210ENST00000428307 Q6ZUT4 128 aa7.39□□□□□ -1.23
HDAC9-210ENST00000428307 NFE4Q86UQ8 179 aa7.39□□□□□ -1.23
HDAC9-210ENST00000428307 WFDC9Q8NEX5 89 aa7.39□□□□□ -1.23
HDAC9-210ENST00000428307 HIST1H4GQ99525 98 aa7.39□□□□□ -1.23
HDAC9-210ENST00000428307 X6R8D5 127 aa7.39□□□□□ -1.23
HDAC9-210ENST00000428307 A6NDN8 102 aa7.38□□□□□ -1.23
HDAC9-210ENST00000428307 ZNF22P17026 224 aaPredicted RBP7.38□□□□□ -1.23
HDAC9-210ENST00000428307 PTTG1IPP53801 180 aa7.38□□□□□ -1.23
HDAC9-210ENST00000428307 TSPEAR-AS2P59090 65 aa7.38□□□□□ -1.23
HDAC9-210ENST00000428307 UBE2D3P61077 147 aa7.38□□□□□ -1.23
HDAC9-210ENST00000428307 UBE2D2P62837 147 aa7.38□□□□□ -1.23
HDAC9-210ENST00000428307 DAZ4Q86SG3 579 aaKnown RBP7.38□□□□□ -1.23
HDAC9-210ENST00000428307 RAB37Q96AX2 223 aa7.38□□□□□ -1.23
HDAC9-210ENST00000428307 DAZ3Q9NR90 486 aaKnown RBP7.38□□□□□ -1.23
HDAC9-210ENST00000428307 SPANXA1Q9NS26 97 aa7.38□□□□□ -1.23
HDAC9-210ENST00000428307 BAHCC1Q9P281 2608 aa7.38□□□□□ -1.23
HDAC9-210ENST00000428307 FHL2Q14192 279 aa7.38□□□□□ -1.23
HDAC9-210ENST00000428307 KRTAP24-1Q3LI83 254 aa7.38□□□□□ -1.23
HDAC9-210ENST00000428307 PLEKHB2Q96CS7 222 aa7.38□□□□□ -1.23
HDAC9-210ENST00000428307 NAA38Q9BRA0 125 aaKnown RBP7.38□□□□□ -1.23
HDAC9-210ENST00000428307 TRBV6-4A0A1B0GX49 114 aa7.37□□□□□ -1.23
HDAC9-210ENST00000428307 VAMP3Q15836 100 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms