RNA–Protein interactions for RNA: ENST00000428240.1

ITSN1-216, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 213 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-216ENST00000428240 PHF5AQ7RTV0 110 aaKnown RBP4.92□□□□□ -1.62
ITSN1-216ENST00000428240 MLST8Q9BVC4 326 aa4.92□□□□□ -1.62
ITSN1-216ENST00000428240 MUC17Q685J3 4493 aa4.91□□□□□ -1.62
ITSN1-216ENST00000428240 KRTAP1-4P0C5Y4 121 aa4.91□□□□□ -1.62
ITSN1-216ENST00000428240 XCL1P47992 114 aa4.91□□□□□ -1.62
ITSN1-216ENST00000428240 SYCNQ0VAF6 134 aa4.91□□□□□ -1.62
ITSN1-216ENST00000428240 C9orf116Q5BN46 136 aaPredicted RBP4.91□□□□□ -1.62
ITSN1-216ENST00000428240 CST9LP1Q5W188 147 aa4.91□□□□□ -1.62
ITSN1-216ENST00000428240 FER1L6-AS1Q8NA97 138 aa4.91□□□□□ -1.62
ITSN1-216ENST00000428240 DIRC1Q969H9 104 aa4.91□□□□□ -1.62
ITSN1-216ENST00000428240 TPPP3Q9BW30 176 aa4.91□□□□□ -1.62
ITSN1-216ENST00000428240 NIT2Q9NQR4 276 aa4.91□□□□□ -1.62
ITSN1-216ENST00000428240 PKIGQ9Y2B9 76 aa4.91□□□□□ -1.62
ITSN1-216ENST00000428240 FSIP2Q5CZC0 6907 aa4.9□□□□□ -1.62
ITSN1-216ENST00000428240 IGLV1-50A0A075B6I6 118 aa4.9□□□□□ -1.63
ITSN1-216ENST00000428240 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.9□□□□□ -1.63
ITSN1-216ENST00000428240 IGHV1-58A0A0C4DH39 117 aa4.9□□□□□ -1.63
ITSN1-216ENST00000428240 IGKV2-29A2NJV5 120 aaPredicted RBP4.9□□□□□ -1.63
ITSN1-216ENST00000428240 H0Y9J4 135 aa4.9□□□□□ -1.63
ITSN1-216ENST00000428240 CCL25O15444 150 aa4.9□□□□□ -1.63
ITSN1-216ENST00000428240 IGLV7-43P04211 117 aa4.9□□□□□ -1.63
ITSN1-216ENST00000428240 BCL2P10415 239 aa4.9□□□□□ -1.63
ITSN1-216ENST00000428240 IFITM3Q01628 133 aa4.9□□□□□ -1.63
ITSN1-216ENST00000428240 AMMECR1LQ6DCA0 310 aa4.9□□□□□ -1.63
ITSN1-216ENST00000428240 RPL7L1Q6DKI1 246 aaKnown RBP4.9□□□□□ -1.63
ITSN1-216ENST00000428240 RNASEKQ6P5S7 137 aaKnown RBP4.9□□□□□ -1.63
ITSN1-216ENST00000428240 BAGE2Q86Y30 109 aa4.9□□□□□ -1.63
ITSN1-216ENST00000428240 KRTAP11-1Q8IUC1 163 aa4.9□□□□□ -1.63
ITSN1-216ENST00000428240 STOML3Q8TAV4 291 aa4.9□□□□□ -1.63
ITSN1-216ENST00000428240 MARVELD1Q9BSK0 173 aa4.9□□□□□ -1.63
ITSN1-216ENST00000428240 LOC107984640A0A0U1RRK4 108 aa4.89□□□□□ -1.63
ITSN1-216ENST00000428240 SCO2A0A1W2PP80 73 aa4.89□□□□□ -1.63
ITSN1-216ENST00000428240 MAP1LC3B2A6NCE7 125 aa4.89□□□□□ -1.63
ITSN1-216ENST00000428240 ZNF561-AS1K7EIQ3 104 aa4.89□□□□□ -1.63
ITSN1-216ENST00000428240 IGLC6P0CF74 106 aa4.89□□□□□ -1.63
ITSN1-216ENST00000428240 NTF3P20783 257 aa4.89□□□□□ -1.63
ITSN1-216ENST00000428240 FHITP49789 147 aa4.89□□□□□ -1.63
ITSN1-216ENST00000428240 Q6ZNX1 250 aa4.89□□□□□ -1.63
ITSN1-216ENST00000428240 OR5A1Q8NGJ0 315 aa4.89□□□□□ -1.63
ITSN1-216ENST00000428240 TCEAL7Q9BRU2 100 aa4.89□□□□□ -1.63
ITSN1-216ENST00000428240 MAP1LC3BQ9GZQ8 125 aa4.89□□□□□ -1.63
ITSN1-216ENST00000428240 MED28Q9H204 178 aa4.89□□□□□ -1.63
ITSN1-216ENST00000428240 TMA7Q9Y2S6 64 aaKnown RBP4.89□□□□□ -1.63
ITSN1-216ENST00000428240 LINC00959A0A1B0GUT2 108 aa4.88□□□□□ -1.63
ITSN1-216ENST00000428240 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.88□□□□□ -1.63
ITSN1-216ENST00000428240 PAGE4O60829 102 aa4.88□□□□□ -1.63
ITSN1-216ENST00000428240 UPK1BO75841 260 aa4.88□□□□□ -1.63
ITSN1-216ENST00000428240 FGF6P10767 208 aa4.88□□□□□ -1.63
ITSN1-216ENST00000428240 CAMPP49913 170 aa4.88□□□□□ -1.63
ITSN1-216ENST00000428240 MEF2BQ02080 365 aaPredicted RBP4.88□□□□□ -1.63
ITSN1-216ENST00000428240 Q5BKY6 102 aa4.88□□□□□ -1.63
ITSN1-216ENST00000428240 IGLV4-69A0A075B6H9 119 aa4.87□□□□□ -1.63
ITSN1-216ENST00000428240 A0A087WZ39 114 aa4.87□□□□□ -1.63
ITSN1-216ENST00000428240 S100A9P06702 114 aaKnown RBP4.87□□□□□ -1.63
ITSN1-216ENST00000428240 UBE2D1P51668 147 aa4.87□□□□□ -1.63
ITSN1-216ENST00000428240 DEFA1P59665 94 aa4.87□□□□□ -1.63
ITSN1-216ENST00000428240 AKR1C8PQ5T2L2 129 aa4.87□□□□□ -1.63
ITSN1-216ENST00000428240 GATD1Q8NB37 220 aa4.87□□□□□ -1.63
ITSN1-216ENST00000428240 NUP35Q8NFH5 326 aa4.87□□□□□ -1.63
ITSN1-216ENST00000428240 TRAV1-1A0A0B4J248 108 aa4.86□□□□□ -1.63
ITSN1-216ENST00000428240 H7C423 109 aa4.86□□□□□ -1.63
ITSN1-216ENST00000428240 APOMO95445 188 aa4.86□□□□□ -1.63
ITSN1-216ENST00000428240 TSPAN13O95857 204 aa4.86□□□□□ -1.63
ITSN1-216ENST00000428240 EIF5AP63241 154 aaKnown RBP4.86□□□□□ -1.63
ITSN1-216ENST00000428240 RPL18AQ02543 176 aaKnown RBP4.86□□□□□ -1.63
ITSN1-216ENST00000428240 TMUB2Q71RG4 321 aa4.86□□□□□ -1.63
ITSN1-216ENST00000428240 RPL39LQ96EH5 51 aaKnown RBP4.86□□□□□ -1.63
ITSN1-216ENST00000428240 OPRPNQ99935 248 aaPredicted RBP4.86□□□□□ -1.63
ITSN1-216ENST00000428240 CRCT1Q9UGL9 99 aa4.86□□□□□ -1.63
ITSN1-216ENST00000428240 BORCS7-ASMTA0A0B4J1R7 106 aa4.85□□□□□ -1.63
ITSN1-216ENST00000428240 FAM168BA1KXE4 195 aa4.85□□□□□ -1.63
ITSN1-216ENST00000428240 APCSP02743 223 aa4.85□□□□□ -1.63
ITSN1-216ENST00000428240 TRGC1P0CF51 173 aa4.85□□□□□ -1.63
ITSN1-216ENST00000428240 ZNF25P17030 456 aaPredicted RBP4.85□□□□□ -1.63
ITSN1-216ENST00000428240 CD164L2Q6UWJ8 174 aa4.85□□□□□ -1.63
ITSN1-216ENST00000428240 LYZL1Q6UWQ5 148 aa4.85□□□□□ -1.63
ITSN1-216ENST00000428240 OR2D3Q8NGH3 330 aa4.85□□□□□ -1.63
ITSN1-216ENST00000428240 ISOC2Q96AB3 205 aa4.85□□□□□ -1.63
ITSN1-216ENST00000428240 CAMK2N2Q96S95 79 aa4.85□□□□□ -1.63
ITSN1-216ENST00000428240 A0A1B0GV50 99 aa4.84□□□□□ -1.63
ITSN1-216ENST00000428240 C19orf71A6NCJ1 209 aa4.84□□□□□ -1.63
ITSN1-216ENST00000428240 NCR2O95944 276 aa4.84□□□□□ -1.63
ITSN1-216ENST00000428240 RPL13AP40429 203 aaKnown RBP4.84□□□□□ -1.63
ITSN1-216ENST00000428240 RPL35P42766 123 aaKnown RBP4.84□□□□□ -1.63
ITSN1-216ENST00000428240 SS18Q15532 418 aa4.84□□□□□ -1.63
ITSN1-216ENST00000428240 LCE2DQ5TA82 110 aaPredicted RBP4.84□□□□□ -1.63
ITSN1-216ENST00000428240 S100ZQ8WXG8 99 aa4.84□□□□□ -1.63
ITSN1-216ENST00000428240 TMEM101Q96IK0 257 aa4.84□□□□□ -1.63
ITSN1-216ENST00000428240 SDHAF1A6NFY7 115 aa4.83□□□□□ -1.64
ITSN1-216ENST00000428240 F2Z2F3 143 aa4.83□□□□□ -1.64
ITSN1-216ENST00000428240 BCL2L11O43521 198 aa4.83□□□□□ -1.64
ITSN1-216ENST00000428240 RPS20P60866 119 aaKnown RBP4.83□□□□□ -1.64
ITSN1-216ENST00000428240 EIF5AL1Q6IS14 154 aaKnown RBP4.83□□□□□ -1.64
ITSN1-216ENST00000428240 LINC00299Q6ZSB3 139 aa4.83□□□□□ -1.64
ITSN1-216ENST00000428240 BTF3L4Q96K17 158 aa4.83□□□□□ -1.64
ITSN1-216ENST00000428240 CDC42SE2Q9NRR3 84 aa4.83□□□□□ -1.64
ITSN1-216ENST00000428240 ALG5Q9Y673 324 aa4.83□□□□□ -1.64
ITSN1-216ENST00000428240 PFDN1O60925 122 aa4.82□□□□□ -1.64
ITSN1-216ENST00000428240 ESDP10768 282 aa4.82□□□□□ -1.64
ITSN1-216ENST00000428240 MALP21145 153 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms