RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 C14orf144Q96I85 54 aa1.04□□□□□ -2.24
PTPRC-208ENST00000427110 C2orf88Q9BSF0 95 aa1.04□□□□□ -2.24
PTPRC-208ENST00000427110 DYNLRB1Q9NP97 96 aa1.04□□□□□ -2.24
PTPRC-208ENST00000427110 MRPL36Q9P0J6 103 aaKnown RBP1.04□□□□□ -2.24
PTPRC-208ENST00000427110 NAT8BQ9UHF3 227 aa1.04□□□□□ -2.24
PTPRC-208ENST00000427110 EPDR1Q9UM22 224 aa1.04□□□□□ -2.24
PTPRC-208ENST00000427110 SOX21Q9Y651 276 aaPredicted RBP1.04□□□□□ -2.24
PTPRC-208ENST00000427110 CACNA1BQ00975 2339 aa1.04□□□□□ -2.24
PTPRC-208ENST00000427110 ZFHX2Q9C0A1 2572 aaPredicted RBP1.03□□□□□ -2.24
PTPRC-208ENST00000427110 LRBAP50851 2863 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 TACC2O95359 2948 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 COL6A6A6NMZ7 2263 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.03□□□□□ -2.24
PTPRC-208ENST00000427110 SPTA1P02549 2419 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 TRBV19A0A075B6N1 114 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 TRAV5A0A0B4J249 113 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 A0A0J9YX75 114 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 C20orf202A1L168 122 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 C2orf70A6NJV1 201 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 HIGD1CA8MV81 97 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 H3BRN7 92 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 J3QLI3 93 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 K7EIM0 57 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 M0QZK8 103 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 BRI3O95415 125 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 HLA-DRB1P01911 266 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 TCRAP04437 139 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 SLC25A5P05141 298 aaKnown RBP1.03□□□□□ -2.24
PTPRC-208ENST00000427110 P0DMU3 169 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 FAM231AP0DMU4 169 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 FAM231CP0DMU5 169 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 IGLC2P0DOY2 106 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 PYYP10082 97 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 CBLN1P23435 193 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 SRIP30626 198 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 S100A7P31151 101 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 REG1BP48304 166 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 UBE2G1P62253 170 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 UBE2L3P68036 154 aaKnown RBP1.03□□□□□ -2.24
PTPRC-208ENST00000427110 PSG9Q00887 426 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 FXYD3Q14802 87 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 PMCHL1Q16048 86 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 CLEC12BQ2HXU8 276 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 C10orf55Q5SWW7 151 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 MINOS1Q5TGZ0 78 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 GDF5OSQ5U4N7 250 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 Q6AWC8 147 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 LINC00322Q6ZN03 302 aaPredicted RBP1.03□□□□□ -2.24
PTPRC-208ENST00000427110 SPATA12Q7Z6I5 190 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 S100A7AQ86SG5 101 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 BAGE2Q86Y30 109 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 BPIFA4PQ86YQ2 179 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 BOD1L2Q8IYS8 172 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 OR8I2Q8N0Y5 310 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 TTC9CQ8N5M4 171 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 SIGLECL1Q8N7X8 197 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 TMEM75Q8N9X5 138 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 OR8B3Q8NGG8 313 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 C18orf32Q8TCD1 76 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 CHCHD1Q96BP2 118 aaKnown RBP1.03□□□□□ -2.24
PTPRC-208ENST00000427110 MIEN1Q9BRT3 115 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 TMEM208Q9BTX3 173 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 RNASE7Q9H1E1 156 aaKnown RBP1.03□□□□□ -2.24
PTPRC-208ENST00000427110 GTSF1LQ9H1H1 148 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 OTORQ9NRC9 128 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 CBLN4Q9NTU7 201 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 LINC00527Q9UJ94 153 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 HIGD1AQ9Y241 93 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 ZFP30Q9Y2G7 519 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 MINOS1-NBL1R4GNA1 71 aa1.03□□□□□ -2.24
PTPRC-208ENST00000427110 CR1P17927 2039 aa1.03□□□□□ -2.25
PTPRC-208ENST00000427110 SPTBN2O15020 2390 aa1.03□□□□□ -2.25
PTPRC-208ENST00000427110 A0A1B0GUT8 65 aa1.02□□□□□ -2.25
PTPRC-208ENST00000427110 A0A1B0GV90 55 aa1.02□□□□□ -2.25
PTPRC-208ENST00000427110 NBASA2RRP1 2371 aa1.02□□□□□ -2.25
PTPRC-208ENST00000427110 GRIFINA4D1Z8 144 aa1.02□□□□□ -2.25
PTPRC-208ENST00000427110 RBAKDNA6NC62 111 aa1.02□□□□□ -2.25
PTPRC-208ENST00000427110 LINC01546A6NGU7 62 aa1.02□□□□□ -2.25
PTPRC-208ENST00000427110 ZNF705FA8MVS1 300 aaPredicted RBP1.02□□□□□ -2.25
PTPRC-208ENST00000427110 F2Z2F3 143 aa1.02□□□□□ -2.25
PTPRC-208ENST00000427110 LYNX1G3V0Z9 82 aa1.02□□□□□ -2.25
PTPRC-208ENST00000427110 M0R143 59 aa1.02□□□□□ -2.25
PTPRC-208ENST00000427110 OVOL1O14753 267 aa1.02□□□□□ -2.25
PTPRC-208ENST00000427110 GNG7O60262 68 aa1.02□□□□□ -2.25
PTPRC-208ENST00000427110 LINC00614P0C842 121 aa1.02□□□□□ -2.25
PTPRC-208ENST00000427110 C3orf79P0CE67 100 aa1.02□□□□□ -2.25
PTPRC-208ENST00000427110 IGLC6P0CF74 106 aa1.02□□□□□ -2.25
PTPRC-208ENST00000427110 ZNF705DP0CH99 300 aaPredicted RBP1.02□□□□□ -2.25
PTPRC-208ENST00000427110 ZNF705BP0CI00 300 aaPredicted RBP1.02□□□□□ -2.25
PTPRC-208ENST00000427110 IGLC3P0DOY3 106 aa1.02□□□□□ -2.25
PTPRC-208ENST00000427110 LYNX1P0DP58 116 aa1.02□□□□□ -2.25
PTPRC-208ENST00000427110 MGST1P10620 155 aaKnown RBP1.02□□□□□ -2.25
PTPRC-208ENST00000427110 SLC25A16P16260 332 aa1.02□□□□□ -2.25
PTPRC-208ENST00000427110 RPL7P18124 248 aaKnown RBP1.02□□□□□ -2.25
PTPRC-208ENST00000427110 CRIP1P50238 77 aa1.02□□□□□ -2.25
PTPRC-208ENST00000427110 EFNA4P52798 201 aa1.02□□□□□ -2.25
PTPRC-208ENST00000427110 RPS20P60866 119 aaKnown RBP1.02□□□□□ -2.25
PTPRC-208ENST00000427110 ARF6P62330 175 aa1.02□□□□□ -2.25
PTPRC-208ENST00000427110 HBBP68871 147 aa1.02□□□□□ -2.25
PTPRC-208ENST00000427110 PLGLAQ15195 96 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms