RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 RNASE8Q8TDE3 154 aaKnown RBP11.14□□□□□ -0.63
SHOX2-202ENST00000425436 TMEM141Q96I45 108 aa11.14□□□□□ -0.63
SHOX2-202ENST00000425436 A0A087WX48 190 aa11.13□□□□□ -0.63
SHOX2-202ENST00000425436 DAZ2Q13117 558 aaKnown RBP11.13□□□□□ -0.63
SHOX2-202ENST00000425436 SLC25A34Q6PIV7 304 aa11.13□□□□□ -0.63
SHOX2-202ENST00000425436 TNFRSF18Q9Y5U5 241 aa11.13□□□□□ -0.63
SHOX2-202ENST00000425436 DPM2O94777 84 aa11.12□□□□□ -0.63
SHOX2-202ENST00000425436 IGHV3-53P01767 116 aa11.12□□□□□ -0.63
SHOX2-202ENST00000425436 IGKCP01834 107 aa11.12□□□□□ -0.63
SHOX2-202ENST00000425436 PLNP26678 52 aa11.12□□□□□ -0.63
SHOX2-202ENST00000425436 DNAH7Q8WXX0 4024 aa11.11□□□□□ -0.63
SHOX2-202ENST00000425436 WWC2-AS2Q96NR7 200 aa11.11□□□□□ -0.63
SHOX2-202ENST00000425436 TIMM17AQ99595 171 aa11.11□□□□□ -0.63
SHOX2-202ENST00000425436 C11orf68Q9H3H3 251 aaKnown RBP11.11□□□□□ -0.63
SHOX2-202ENST00000425436 OR4C5Q8NGB2 326 aa11.1□□□□□ -0.63
SHOX2-202ENST00000425436 C2orf88Q9BSF0 95 aa11.1□□□□□ -0.63
SHOX2-202ENST00000425436 MRPL16Q9NX20 251 aaKnown RBP11.1□□□□□ -0.63
SHOX2-202ENST00000425436 DKK2Q9UBU2 259 aa11.1□□□□□ -0.63
SHOX2-202ENST00000425436 TRGV1A0A0A0MS02 117 aa11.09□□□□□ -0.63
SHOX2-202ENST00000425436 COX8AP10176 69 aa11.09□□□□□ -0.63
SHOX2-202ENST00000425436 CELA1Q9UNI1 258 aa11.09□□□□□ -0.63
SHOX2-202ENST00000425436 TRAV4A0A0B4J268 109 aa11.09□□□□□ -0.63
SHOX2-202ENST00000425436 PLAC8L1A1L4L8 177 aa11.09□□□□□ -0.63
SHOX2-202ENST00000425436 F8VRH5 84 aa11.09□□□□□ -0.63
SHOX2-202ENST00000425436 PAPPA-AS1Q5QFB9 102 aa11.09□□□□□ -0.63
SHOX2-202ENST00000425436 NEXN-AS1Q8NBZ9 246 aa11.09□□□□□ -0.63
SHOX2-202ENST00000425436 TRBV10-1A0A0K0K1A3 114 aa11.08□□□□□ -0.64
SHOX2-202ENST00000425436 DLEU1O43261 78 aa11.08□□□□□ -0.64
SHOX2-202ENST00000425436 NANOS2P60321 138 aaKnown RBP11.08□□□□□ -0.64
SHOX2-202ENST00000425436 NEGR1Q7Z3B1 354 aa11.08□□□□□ -0.64
SHOX2-202ENST00000425436 C11orf45Q8TAV5 145 aa11.08□□□□□ -0.64
SHOX2-202ENST00000425436 IGHV3-73A0A0B4J1V6 119 aa11.07□□□□□ -0.64
SHOX2-202ENST00000425436 IGIPA6NJ69 53 aa11.07□□□□□ -0.64
SHOX2-202ENST00000425436 NPSP0C0P6 89 aa11.07□□□□□ -0.64
SHOX2-202ENST00000425436 FAM222AQ5U5X8 452 aa11.07□□□□□ -0.64
SHOX2-202ENST00000425436 SNHG12Q9BXW3 62 aa11.07□□□□□ -0.64
SHOX2-202ENST00000425436 CHTOPQ9Y3Y2 248 aaKnown RBP11.07□□□□□ -0.64
SHOX2-202ENST00000425436 TSHBP01222 138 aa11.06□□□□□ -0.64
SHOX2-202ENST00000425436 BAALCQ8WXS3 180 aa11.06□□□□□ -0.64
SHOX2-202ENST00000425436 NOP10Q9NPE3 64 aaKnown RBP11.06□□□□□ -0.64
SHOX2-202ENST00000425436 MRPL35Q9NZE8 188 aaKnown RBP11.06□□□□□ -0.64
SHOX2-202ENST00000425436 HHLA3Q9XRX5 114 aa11.06□□□□□ -0.64
SHOX2-202ENST00000425436 SIVA1O15304 175 aa11.05□□□□□ -0.64
SHOX2-202ENST00000425436 SPART-AS1P0CW21 52 aa11.05□□□□□ -0.64
SHOX2-202ENST00000425436 PMVKQ15126 192 aa11.05□□□□□ -0.64
SHOX2-202ENST00000425436 STPG4Q8N801 248 aa11.05□□□□□ -0.64
SHOX2-202ENST00000425436 C20orf203Q8NBC4 194 aa11.05□□□□□ -0.64
SHOX2-202ENST00000425436 PRSS29PA6NIE9 313 aa11.04□□□□□ -0.64
SHOX2-202ENST00000425436 CRYBA4P53673 196 aa11.04□□□□□ -0.64
SHOX2-202ENST00000425436 C12orf74Q32Q52 190 aa11.04□□□□□ -0.64
SHOX2-202ENST00000425436 ANKRD39Q53RE8 183 aa11.04□□□□□ -0.64
SHOX2-202ENST00000425436 ZFAND6Q6FIF0 208 aa11.04□□□□□ -0.64
SHOX2-202ENST00000425436 MUC7Q8TAX7 377 aa11.04□□□□□ -0.64
SHOX2-202ENST00000425436 PYGO1Q9Y3Y4 419 aa11.04□□□□□ -0.64
SHOX2-202ENST00000425436 CSMD3Q7Z407 3707 aa11.04□□□□□ -0.64
SHOX2-202ENST00000425436 BOD1L2Q8IYS8 172 aa11.04□□□□□ -0.64
SHOX2-202ENST00000425436 DEFB130BP0DP73 79 aa11.03□□□□□ -0.64
SHOX2-202ENST00000425436 DEFB130AP0DP74 79 aa11.03□□□□□ -0.64
SHOX2-202ENST00000425436 ZC2HC1BQ5TFG8 222 aa11.03□□□□□ -0.64
SHOX2-202ENST00000425436 Q6ZSN1 163 aa11.03□□□□□ -0.64
SHOX2-202ENST00000425436 Q6ZTI0 123 aa11.03□□□□□ -0.64
SHOX2-202ENST00000425436 TRGV2A0A075B6R0 118 aa11.02□□□□□ -0.65
SHOX2-202ENST00000425436 P0DMU3 169 aa11.02□□□□□ -0.65
SHOX2-202ENST00000425436 FAM231AP0DMU4 169 aa11.02□□□□□ -0.65
SHOX2-202ENST00000425436 FAM231CP0DMU5 169 aa11.02□□□□□ -0.65
SHOX2-202ENST00000425436 RPL36AP83881 106 aaKnown RBP11.02□□□□□ -0.65
SHOX2-202ENST00000425436 COTL1Q14019 142 aa11.02□□□□□ -0.65
SHOX2-202ENST00000425436 Q6ZTC4 211 aa11.02□□□□□ -0.65
SHOX2-202ENST00000425436 RPL36ALQ969Q0 106 aaKnown RBP11.02□□□□□ -0.65
SHOX2-202ENST00000425436 CST9LQ9H4G1 147 aa11.02□□□□□ -0.65
SHOX2-202ENST00000425436 TRBV7-3A0A075B6L6 115 aa11.01□□□□□ -0.65
SHOX2-202ENST00000425436 K7EQD1 137 aa11.01□□□□□ -0.65
SHOX2-202ENST00000425436 EREGO14944 169 aa11.01□□□□□ -0.65
SHOX2-202ENST00000425436 RPL39P62891 51 aaKnown RBP11.01□□□□□ -0.65
SHOX2-202ENST00000425436 COL5A1-AS1Q5SY13 56 aa11.01□□□□□ -0.65
SHOX2-202ENST00000425436 DAZ4Q86SG3 579 aaKnown RBP11.01□□□□□ -0.65
SHOX2-202ENST00000425436 DAZ3Q9NR90 486 aaKnown RBP11.01□□□□□ -0.65
SHOX2-202ENST00000425436 LYRM9A8MSI8 78 aa11□□□□□ -0.65
SHOX2-202ENST00000425436 NMUP48645 174 aa11□□□□□ -0.65
SHOX2-202ENST00000425436 DAD1P61803 113 aa11□□□□□ -0.65
SHOX2-202ENST00000425436 SMAGPQ0VAQ4 97 aa11□□□□□ -0.65
SHOX2-202ENST00000425436 TMEM97Q5BJF2 176 aa11□□□□□ -0.65
SHOX2-202ENST00000425436 ZNF479Q96JC4 524 aa11□□□□□ -0.65
SHOX2-202ENST00000425436 TRBV6-4A0A1B0GX49 114 aa10.99□□□□□ -0.65
SHOX2-202ENST00000425436 GAGE12BA1L429 117 aa10.99□□□□□ -0.65
SHOX2-202ENST00000425436 GAGE7O76087 117 aa10.99□□□□□ -0.65
SHOX2-202ENST00000425436 GAGE12FP0CL80 117 aa10.99□□□□□ -0.65
SHOX2-202ENST00000425436 GAGE12GP0CL81 117 aa10.99□□□□□ -0.65
SHOX2-202ENST00000425436 GAGE12IP0CL82 117 aa10.99□□□□□ -0.65
SHOX2-202ENST00000425436 FGF6P10767 208 aa10.99□□□□□ -0.65
SHOX2-202ENST00000425436 PHLDA1Q8WV24 401 aaPredicted RBP10.99□□□□□ -0.65
SHOX2-202ENST00000425436 SPANXA1Q9NS26 97 aa10.99□□□□□ -0.65
SHOX2-202ENST00000425436 VCX2Q9H322 139 aa10.99□□□□□ -0.65
SHOX2-202ENST00000425436 STARD9Q9P2P6 4700 aa10.98□□□□□ -0.65
SHOX2-202ENST00000425436 TEX48A0A1B0GUV7 120 aa10.98□□□□□ -0.65
SHOX2-202ENST00000425436 HTN3P15516 51 aa10.98□□□□□ -0.65
SHOX2-202ENST00000425436 HERVK_113P61574 105 aa10.98□□□□□ -0.65
SHOX2-202ENST00000425436 ZNRF2Q8NHG8 242 aa10.98□□□□□ -0.65
SHOX2-202ENST00000425436 TENM2Q9NT68 2774 aa10.97□□□□□ -0.65
SHOX2-202ENST00000425436 C3orf84H3BNL1 204 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms