RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 TSPAN13O95857 204 aa8□□□□□ -1.13
DDX56-203ENST00000421223 Q6ZSN1 163 aa8□□□□□ -1.13
DDX56-203ENST00000421223 NBEAL2Q6ZNJ1 2754 aa8□□□□□ -1.13
DDX56-203ENST00000421223 TRAV12-1A0A0B4J245 112 aa8□□□□□ -1.13
DDX56-203ENST00000421223 INSP01308 110 aa8□□□□□ -1.13
DDX56-203ENST00000421223 ZNF415Q09FC8 603 aa8□□□□□ -1.13
DDX56-203ENST00000421223 PMVKQ15126 192 aa8□□□□□ -1.13
DDX56-203ENST00000421223 TMEM86BQ8N661 226 aa8□□□□□ -1.13
DDX56-203ENST00000421223 TEX29Q8N6K0 151 aa8□□□□□ -1.13
DDX56-203ENST00000421223 SIGMAR1Q99720 223 aa8□□□□□ -1.13
DDX56-203ENST00000421223 KRTAP1-1Q07627 177 aa8□□□□□ -1.13
DDX56-203ENST00000421223 ZNF418Q8TF45 676 aaPredicted RBP8□□□□□ -1.13
DDX56-203ENST00000421223 TRGV1A0A0A0MS02 117 aa7.99□□□□□ -1.13
DDX56-203ENST00000421223 TRBV27A0A0K0K1C4 114 aa7.99□□□□□ -1.13
DDX56-203ENST00000421223 I3L3M4 83 aa7.99□□□□□ -1.13
DDX56-203ENST00000421223 M0R2P5 195 aa7.99□□□□□ -1.13
DDX56-203ENST00000421223 SMIM13P0DJ93 91 aa7.99□□□□□ -1.13
DDX56-203ENST00000421223 SRSF9Q13242 221 aaKnown RBP eCLIP7.99□□□□□ -1.13
DDX56-203ENST00000421223 MRPL23Q16540 153 aaKnown RBP7.99□□□□□ -1.13
DDX56-203ENST00000421223 IGIPA6NJ69 53 aa7.99□□□□□ -1.13
DDX56-203ENST00000421223 G3V4G9 280 aa7.99□□□□□ -1.13
DDX56-203ENST00000421223 K7EP34 96 aa7.99□□□□□ -1.13
DDX56-203ENST00000421223 SFTA2Q6UW10 78 aa7.98□□□□□ -1.13
DDX56-203ENST00000421223 GTF2H5Q6ZYL4 71 aa7.98□□□□□ -1.13
DDX56-203ENST00000421223 POM121L12Q8N7R1 296 aa7.98□□□□□ -1.13
DDX56-203ENST00000421223 AKAP9Q99996 3911 aa7.98□□□□□ -1.13
DDX56-203ENST00000421223 MYMXA0A1B0GTQ4 84 aa7.98□□□□□ -1.13
DDX56-203ENST00000421223 FLNBO75369 2602 aaKnown RBP7.98□□□□□ -1.13
DDX56-203ENST00000421223 A0A1W2PPM0 123 aa7.97□□□□□ -1.13
DDX56-203ENST00000421223 B5MCH6 92 aa7.97□□□□□ -1.13
DDX56-203ENST00000421223 CEND1Q8N111 149 aa7.97□□□□□ -1.13
DDX56-203ENST00000421223 PLEKHB2Q96CS7 222 aa7.97□□□□□ -1.13
DDX56-203ENST00000421223 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.97□□□□□ -1.13
DDX56-203ENST00000421223 A0A0J9YXV3 536 aa7.97□□□□□ -1.13
DDX56-203ENST00000421223 IGKV2-29A2NJV5 120 aaPredicted RBP7.97□□□□□ -1.13
DDX56-203ENST00000421223 ZNRF2Q8NHG8 242 aa7.97□□□□□ -1.13
DDX56-203ENST00000421223 TM2D2Q9BX73 214 aa7.97□□□□□ -1.13
DDX56-203ENST00000421223 TRBV6-5A0A0K0K1A5 114 aa7.96□□□□□ -1.13
DDX56-203ENST00000421223 A8MWV9 139 aa7.96□□□□□ -1.13
DDX56-203ENST00000421223 HERVK_113P61574 105 aa7.96□□□□□ -1.13
DDX56-203ENST00000421223 CFAP126Q5VTH2 177 aa7.96□□□□□ -1.13
DDX56-203ENST00000421223 C20orf203Q8NBC4 194 aa7.96□□□□□ -1.13
DDX56-203ENST00000421223 IGLV4-69A0A075B6H9 119 aa7.96□□□□□ -1.14
DDX56-203ENST00000421223 TMEM141Q96I45 108 aa7.96□□□□□ -1.14
DDX56-203ENST00000421223 SAMD5Q5TGI4 173 aa7.95□□□□□ -1.14
DDX56-203ENST00000421223 PPDPFQ9H3Y8 114 aa7.95□□□□□ -1.14
DDX56-203ENST00000421223 SPCS1Q9Y6A9 102 aa7.95□□□□□ -1.14
DDX56-203ENST00000421223 ATRQ13535 2644 aa7.95□□□□□ -1.14
DDX56-203ENST00000421223 E9PLD3 99 aa7.95□□□□□ -1.14
DDX56-203ENST00000421223 C1orf158Q8N1D5 194 aa7.95□□□□□ -1.14
DDX56-203ENST00000421223 ADARB2-AS1A8MUL3 147 aa7.95□□□□□ -1.14
DDX56-203ENST00000421223 TIMM17AQ99595 171 aa7.95□□□□□ -1.14
DDX56-203ENST00000421223 NOP10Q9NPE3 64 aaKnown RBP7.95□□□□□ -1.14
DDX56-203ENST00000421223 OTOGQ6ZRI0 2925 aa7.94□□□□□ -1.14
DDX56-203ENST00000421223 RNASE1P07998 156 aaKnown RBP7.94□□□□□ -1.14
DDX56-203ENST00000421223 Q6ZTI0 123 aa7.94□□□□□ -1.14
DDX56-203ENST00000421223 APOMO95445 188 aa7.94□□□□□ -1.14
DDX56-203ENST00000421223 FABP2P12104 132 aa7.94□□□□□ -1.14
DDX56-203ENST00000421223 OR5A1Q8NGJ0 315 aa7.94□□□□□ -1.14
DDX56-203ENST00000421223 F8WDY8 70 aa7.93□□□□□ -1.14
DDX56-203ENST00000421223 PF4P02776 101 aa7.93□□□□□ -1.14
DDX56-203ENST00000421223 LGALS3P17931 250 aaKnown RBP7.93□□□□□ -1.14
DDX56-203ENST00000421223 RPL24P83731 157 aaKnown RBP7.93□□□□□ -1.14
DDX56-203ENST00000421223 FHL3Q13643 280 aa7.93□□□□□ -1.14
DDX56-203ENST00000421223 TAL2Q16559 108 aa7.93□□□□□ -1.14
DDX56-203ENST00000421223 DGAT2L7PQ6IED9 249 aa7.93□□□□□ -1.14
DDX56-203ENST00000421223 C11orf72Q8NBR9 251 aa7.93□□□□□ -1.14
DDX56-203ENST00000421223 TRAV2A0A0B4J234 112 aa7.93□□□□□ -1.14
DDX56-203ENST00000421223 LY6G6DO95868 133 aa7.93□□□□□ -1.14
DDX56-203ENST00000421223 TSPEAR-AS2P59090 65 aa7.93□□□□□ -1.14
DDX56-203ENST00000421223 RHOHQ15669 191 aa7.93□□□□□ -1.14
DDX56-203ENST00000421223 MTURNQ8N3F0 131 aa7.93□□□□□ -1.14
DDX56-203ENST00000421223 RNF183Q96D59 192 aa7.93□□□□□ -1.14
DDX56-203ENST00000421223 IGLV4-3A0A075B6K6 122 aa7.92□□□□□ -1.14
DDX56-203ENST00000421223 GAGE7O76087 117 aa7.92□□□□□ -1.14
DDX56-203ENST00000421223 GAGE12FP0CL80 117 aa7.92□□□□□ -1.14
DDX56-203ENST00000421223 GAGE12GP0CL81 117 aa7.92□□□□□ -1.14
DDX56-203ENST00000421223 GAGE12IP0CL82 117 aa7.92□□□□□ -1.14
DDX56-203ENST00000421223 C12orf74Q32Q52 190 aa7.92□□□□□ -1.14
DDX56-203ENST00000421223 PAPPA-AS1Q5QFB9 102 aa7.92□□□□□ -1.14
DDX56-203ENST00000421223 VWFP04275 2813 aa7.92□□□□□ -1.14
DDX56-203ENST00000421223 TRGV2A0A075B6R0 118 aa7.92□□□□□ -1.14
DDX56-203ENST00000421223 GAGE12JA6NER3 117 aa7.91□□□□□ -1.14
DDX56-203ENST00000421223 INAFM1C9JVW0 142 aa7.91□□□□□ -1.14
DDX56-203ENST00000421223 J3QQQ9 107 aa7.91□□□□□ -1.14
DDX56-203ENST00000421223 HILS1P60008 231 aa7.91□□□□□ -1.14
DDX56-203ENST00000421223 GAGE4Q13068 117 aa7.91□□□□□ -1.14
DDX56-203ENST00000421223 GAGE5Q13069 117 aa7.91□□□□□ -1.14
DDX56-203ENST00000421223 GAGE13Q4V321 117 aa7.91□□□□□ -1.14
DDX56-203ENST00000421223 TRBV7-3A0A075B6L6 115 aa7.91□□□□□ -1.14
DDX56-203ENST00000421223 LINC00467Q9BRT7 94 aa7.91□□□□□ -1.14
DDX56-203ENST00000421223 TRAV8-3A0A0A6YYJ7 113 aa7.9□□□□□ -1.14
DDX56-203ENST00000421223 A8MZ25 164 aa7.9□□□□□ -1.14
DDX56-203ENST00000421223 LINC01549A6NIU2 74 aa7.9□□□□□ -1.14
DDX56-203ENST00000421223 A8MTW9 85 aa7.9□□□□□ -1.14
DDX56-203ENST00000421223 PTH2Q96A98 100 aa7.9□□□□□ -1.14
DDX56-203ENST00000421223 CSDC2Q9Y534 153 aaKnown RBP7.9□□□□□ -1.14
DDX56-203ENST00000421223 RHODO00212 210 aa7.89□□□□□ -1.15
DDX56-203ENST00000421223 GAGE6Q13070 117 aa7.89□□□□□ -1.15
DDX56-203ENST00000421223 RRN3P1Q2M238 152 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 154.1 ms