RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 C16orf92Q96LL3 132 aa9.49□□□□□ -0.89
LINC00642-201ENST00000419459 C2orf66Q6UXQ4 117 aa9.48□□□□□ -0.89
LINC00642-201ENST00000419459 WFDC9Q8NEX5 89 aa9.48□□□□□ -0.89
LINC00642-201ENST00000419459 C20orf173Q96LM9 149 aa9.48□□□□□ -0.89
LINC00642-201ENST00000419459 CARD19Q96LW7 228 aa9.48□□□□□ -0.89
LINC00642-201ENST00000419459 DPH3P1Q9H4G8 78 aa9.48□□□□□ -0.89
LINC00642-201ENST00000419459 PRSS29PA6NIE9 313 aa9.48□□□□□ -0.89
LINC00642-201ENST00000419459 ASIPP42127 132 aa9.48□□□□□ -0.89
LINC00642-201ENST00000419459 RPL32P62910 135 aaKnown RBP9.48□□□□□ -0.89
LINC00642-201ENST00000419459 ZFAND6Q6FIF0 208 aa9.48□□□□□ -0.89
LINC00642-201ENST00000419459 RASL10AQ92737 203 aa9.48□□□□□ -0.89
LINC00642-201ENST00000419459 C10orf126Q8N4M7 172 aa9.47□□□□□ -0.89
LINC00642-201ENST00000419459 ZNF256Q9Y2P7 627 aaPredicted RBP9.47□□□□□ -0.89
LINC00642-201ENST00000419459 A0A0J9YY99 117 aa9.46□□□□□ -0.89
LINC00642-201ENST00000419459 F6UB75 175 aa9.46□□□□□ -0.89
LINC00642-201ENST00000419459 C9orf66Q5T8R8 295 aa9.46□□□□□ -0.89
LINC00642-201ENST00000419459 ZFP2Q6ZN57 461 aa9.46□□□□□ -0.89
LINC00642-201ENST00000419459 ANAPC13Q9BS18 74 aa9.46□□□□□ -0.89
LINC00642-201ENST00000419459 H3BVH4 76 aa9.46□□□□□ -0.9
LINC00642-201ENST00000419459 K7EQG2 157 aa9.46□□□□□ -0.9
LINC00642-201ENST00000419459 TCL1BO95988 128 aa9.46□□□□□ -0.9
LINC00642-201ENST00000419459 WFDC10AQ9H1F0 79 aa9.46□□□□□ -0.9
LINC00642-201ENST00000419459 GAGE5Q13069 117 aa9.45□□□□□ -0.9
LINC00642-201ENST00000419459 GAGE6Q13070 117 aa9.45□□□□□ -0.9
LINC00642-201ENST00000419459 SLC25A29Q8N8R3 303 aa9.45□□□□□ -0.9
LINC00642-201ENST00000419459 PLEKHB2Q96CS7 222 aa9.45□□□□□ -0.9
LINC00642-201ENST00000419459 SPANXA1Q9NS26 97 aa9.45□□□□□ -0.9
LINC00642-201ENST00000419459 NBEAL2Q6ZNJ1 2754 aa9.45□□□□□ -0.9
LINC00642-201ENST00000419459 DNAH3Q8TD57 4116 aa9.44□□□□□ -0.9
LINC00642-201ENST00000419459 APRG1Q8IVJ8 170 aa9.44□□□□□ -0.9
LINC00642-201ENST00000419459 POM121L12Q8N7R1 296 aa9.44□□□□□ -0.9
LINC00642-201ENST00000419459 RNF183Q96D59 192 aa9.44□□□□□ -0.9
LINC00642-201ENST00000419459 LINC01600Q96MT4 127 aa9.44□□□□□ -0.9
LINC00642-201ENST00000419459 PRO1854Q9UHT4 67 aa9.44□□□□□ -0.9
LINC00642-201ENST00000419459 IGHV3-30P01768 117 aa9.44□□□□□ -0.9
LINC00642-201ENST00000419459 IGHV3-30-5P0DP03 117 aa9.44□□□□□ -0.9
LINC00642-201ENST00000419459 TMEM141Q96I45 108 aa9.44□□□□□ -0.9
LINC00642-201ENST00000419459 TRAV21A0A0B4J279 112 aa9.43□□□□□ -0.9
LINC00642-201ENST00000419459 C11orf86A6NJI1 115 aa9.43□□□□□ -0.9
LINC00642-201ENST00000419459 SCGB1C2P0DMR2 95 aa9.43□□□□□ -0.9
LINC00642-201ENST00000419459 DEFB131AP59861 70 aa9.43□□□□□ -0.9
LINC00642-201ENST00000419459 PMVKQ15126 192 aa9.43□□□□□ -0.9
LINC00642-201ENST00000419459 ODF3L2Q3SX64 289 aa9.43□□□□□ -0.9
LINC00642-201ENST00000419459 ANKRD29Q8N6D5 301 aa9.43□□□□□ -0.9
LINC00642-201ENST00000419459 PTH2Q96A98 100 aa9.43□□□□□ -0.9
LINC00642-201ENST00000419459 LINC00477Q96M19 166 aa9.43□□□□□ -0.9
LINC00642-201ENST00000419459 CFC1BP0CG36 223 aa9.43□□□□□ -0.9
LINC00642-201ENST00000419459 CFC1P0CG37 223 aa9.43□□□□□ -0.9
LINC00642-201ENST00000419459 SNRPD3P62318 126 aaKnown RBP9.43□□□□□ -0.9
LINC00642-201ENST00000419459 Q6Q795 121 aa9.43□□□□□ -0.9
LINC00642-201ENST00000419459 MAP6D1Q9H9H5 199 aa9.43□□□□□ -0.9
LINC00642-201ENST00000419459 IGLV4-69A0A075B6H9 119 aa9.42□□□□□ -0.9
LINC00642-201ENST00000419459 RHODO00212 210 aa9.42□□□□□ -0.9
LINC00642-201ENST00000419459 CRYGDP07320 174 aa9.42□□□□□ -0.9
LINC00642-201ENST00000419459 P0DMU3 169 aa9.42□□□□□ -0.9
LINC00642-201ENST00000419459 FAM231AP0DMU4 169 aa9.42□□□□□ -0.9
LINC00642-201ENST00000419459 FAM231CP0DMU5 169 aa9.42□□□□□ -0.9
LINC00642-201ENST00000419459 TIMM17AQ99595 171 aa9.42□□□□□ -0.9
LINC00642-201ENST00000419459 TRAV25A0A0B4J276 109 aa9.41□□□□□ -0.9
LINC00642-201ENST00000419459 SLC25A20O43772 301 aa9.41□□□□□ -0.9
LINC00642-201ENST00000419459 IGKV3-20P01619 116 aa9.41□□□□□ -0.9
LINC00642-201ENST00000419459 ID1P41134 155 aa9.41□□□□□ -0.9
LINC00642-201ENST00000419459 PHLDA3Q9Y5J5 127 aa9.41□□□□□ -0.9
LINC00642-201ENST00000419459 TRBV7-9A0A0J9YWB2 115 aa9.41□□□□□ -0.9
LINC00642-201ENST00000419459 IGIPA6NJ69 53 aa9.41□□□□□ -0.9
LINC00642-201ENST00000419459 KNCNA6PVL3 124 aa9.41□□□□□ -0.9
LINC00642-201ENST00000419459 S100A4P26447 101 aaKnown RBP9.41□□□□□ -0.9
LINC00642-201ENST00000419459 RPL39LQ96EH5 51 aaKnown RBP9.41□□□□□ -0.9
LINC00642-201ENST00000419459 A0A0B4J2C4 111 aa9.4□□□□□ -0.9
LINC00642-201ENST00000419459 NXPH4O95158 308 aa9.4□□□□□ -0.9
LINC00642-201ENST00000419459 KRTAP10-11P60412 298 aa9.4□□□□□ -0.9
LINC00642-201ENST00000419459 BEAN1Q3B7T3 259 aa9.4□□□□□ -0.9
LINC00642-201ENST00000419459 KRTAP21-3Q3LHN1 58 aa9.39□□□□□ -0.91
LINC00642-201ENST00000419459 C14orf178Q8N769 122 aaPredicted RBP9.39□□□□□ -0.91
LINC00642-201ENST00000419459 WIPF1O43516 503 aa9.39□□□□□ -0.91
LINC00642-201ENST00000419459 SNCGO76070 127 aa9.39□□□□□ -0.91
LINC00642-201ENST00000419459 GAGE2BQ13066 116 aa9.39□□□□□ -0.91
LINC00642-201ENST00000419459 GAGE2EQ4V326 116 aa9.39□□□□□ -0.91
LINC00642-201ENST00000419459 PRR9Q5T870 116 aa9.39□□□□□ -0.91
LINC00642-201ENST00000419459 SFTA2Q6UW10 78 aa9.39□□□□□ -0.91
LINC00642-201ENST00000419459 ZFAND2AQ8N6M9 145 aa9.39□□□□□ -0.91
LINC00642-201ENST00000419459 GAGE2DQ9UEU5 116 aa9.39□□□□□ -0.91
LINC00642-201ENST00000419459 DUSP14O95147 198 aaKnown RBP9.38□□□□□ -0.91
LINC00642-201ENST00000419459 PRB2P02812 416 aaPredicted RBP9.38□□□□□ -0.91
LINC00642-201ENST00000419459 MGPP08493 103 aa9.38□□□□□ -0.91
LINC00642-201ENST00000419459 RPL13AP40429 203 aaKnown RBP9.38□□□□□ -0.91
LINC00642-201ENST00000419459 OR10J6PQ8NGY7 276 aa9.38□□□□□ -0.91
LINC00642-201ENST00000419459 C19orf73Q9NVV2 129 aa9.38□□□□□ -0.91
LINC00642-201ENST00000419459 TP53TG1Q9Y2A0 90 aa9.38□□□□□ -0.91
LINC00642-201ENST00000419459 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.38□□□□□ -0.91
LINC00642-201ENST00000419459 TRAV2A0A0B4J234 112 aa9.38□□□□□ -0.91
LINC00642-201ENST00000419459 J3KRW8 73 aa9.38□□□□□ -0.91
LINC00642-201ENST00000419459 J3QQQ9 107 aa9.38□□□□□ -0.91
LINC00642-201ENST00000419459 TSHBP01222 138 aa9.38□□□□□ -0.91
LINC00642-201ENST00000419459 ZNF876PQ49A33 203 aa9.38□□□□□ -0.91
LINC00642-201ENST00000419459 AMELXQ99217 191 aa9.38□□□□□ -0.91
LINC00642-201ENST00000419459 VCYO14598 125 aa9.37□□□□□ -0.91
LINC00642-201ENST00000419459 IGHV3-33P01772 117 aa9.37□□□□□ -0.91
LINC00642-201ENST00000419459 LGALS3P17931 250 aaKnown RBP9.37□□□□□ -0.91
LINC00642-201ENST00000419459 POLR2KP53803 58 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms