RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 I3L3M4 83 aa9.32□□□□□ -0.92
HLA-DMB-258ENST00000418107 C3orf79P0CE67 100 aa9.32□□□□□ -0.92
HLA-DMB-258ENST00000418107 G0S2P27469 103 aa9.32□□□□□ -0.92
HLA-DMB-258ENST00000418107 JOSD1Q15040 202 aaPredicted RBP9.32□□□□□ -0.92
HLA-DMB-258ENST00000418107 PYY3Q5JQD4 70 aa9.32□□□□□ -0.92
HLA-DMB-258ENST00000418107 LINC00518Q8N0U6 118 aa9.32□□□□□ -0.92
HLA-DMB-258ENST00000418107 Q8NAQ8 132 aa9.32□□□□□ -0.92
HLA-DMB-258ENST00000418107 NEXN-AS1Q8NBZ9 246 aa9.32□□□□□ -0.92
HLA-DMB-258ENST00000418107 A0A0J9YWU9 116 aa9.31□□□□□ -0.92
HLA-DMB-258ENST00000418107 H0Y8G0 127 aa9.31□□□□□ -0.92
HLA-DMB-258ENST00000418107 SPART-AS1P0CW21 52 aa9.31□□□□□ -0.92
HLA-DMB-258ENST00000418107 RPL36AP83881 106 aaKnown RBP9.31□□□□□ -0.92
HLA-DMB-258ENST00000418107 LINC00173Q6ZV60 143 aa9.31□□□□□ -0.92
HLA-DMB-258ENST00000418107 RPL36ALQ969Q0 106 aaKnown RBP9.31□□□□□ -0.92
HLA-DMB-258ENST00000418107 DKK2Q9UBU2 259 aa9.31□□□□□ -0.92
HLA-DMB-258ENST00000418107 KIAA1109Q2LD37 5005 aa9.31□□□□□ -0.92
HLA-DMB-258ENST00000418107 RYR1P21817 5038 aa9.3□□□□□ -0.92
HLA-DMB-258ENST00000418107 TRBV27A0A0K0K1C4 114 aa9.3□□□□□ -0.92
HLA-DMB-258ENST00000418107 CEMP1Q6PRD7 247 aaPredicted RBP9.3□□□□□ -0.92
HLA-DMB-258ENST00000418107 ZNRF2Q8NHG8 242 aa9.3□□□□□ -0.92
HLA-DMB-258ENST00000418107 C18orf15Q96N68 181 aa9.3□□□□□ -0.92
HLA-DMB-258ENST00000418107 PRADC1Q9BSG0 188 aa9.3□□□□□ -0.92
HLA-DMB-258ENST00000418107 A0A096LNJ9 63 aa9.29□□□□□ -0.92
HLA-DMB-258ENST00000418107 TRBV10-1A0A0K0K1A3 114 aa9.29□□□□□ -0.92
HLA-DMB-258ENST00000418107 TEX48A0A1B0GUV7 120 aa9.29□□□□□ -0.92
HLA-DMB-258ENST00000418107 FHL2Q14192 279 aa9.29□□□□□ -0.92
HLA-DMB-258ENST00000418107 RHOHQ15669 191 aa9.29□□□□□ -0.92
HLA-DMB-258ENST00000418107 LINC00612Q8N6U2 182 aa9.29□□□□□ -0.92
HLA-DMB-258ENST00000418107 SLC25A29Q8N8R3 303 aa9.29□□□□□ -0.92
HLA-DMB-258ENST00000418107 PHLDA1Q8WV24 401 aaPredicted RBP9.29□□□□□ -0.92
HLA-DMB-258ENST00000418107 DNAH6Q9C0G6 4158 aa9.29□□□□□ -0.92
HLA-DMB-258ENST00000418107 TRBV7-3A0A075B6L6 115 aa9.28□□□□□ -0.92
HLA-DMB-258ENST00000418107 C20orf202A1L168 122 aa9.28□□□□□ -0.92
HLA-DMB-258ENST00000418107 GAGE12JA6NER3 117 aa9.28□□□□□ -0.92
HLA-DMB-258ENST00000418107 ATP5LO75964 103 aa9.28□□□□□ -0.92
HLA-DMB-258ENST00000418107 S100A12P80511 92 aa9.28□□□□□ -0.92
HLA-DMB-258ENST00000418107 GAGE1Q13065 139 aa9.28□□□□□ -0.92
HLA-DMB-258ENST00000418107 GAGE4Q13068 117 aa9.28□□□□□ -0.92
HLA-DMB-258ENST00000418107 GAGE5Q13069 117 aa9.28□□□□□ -0.92
HLA-DMB-258ENST00000418107 GAGE13Q4V321 117 aa9.28□□□□□ -0.92
HLA-DMB-258ENST00000418107 IFI27L1Q96BM0 104 aa9.28□□□□□ -0.92
HLA-DMB-258ENST00000418107 SCGB3A1Q96QR1 104 aa9.28□□□□□ -0.92
HLA-DMB-258ENST00000418107 Q9UF83 564 aa9.28□□□□□ -0.92
HLA-DMB-258ENST00000418107 CYSLTR1Q9Y271 337 aa9.28□□□□□ -0.92
HLA-DMB-258ENST00000418107 IGHV3-38A0A0C4DH36 116 aa9.27□□□□□ -0.93
HLA-DMB-258ENST00000418107 TRBV6-4A0A1B0GX49 114 aa9.27□□□□□ -0.93
HLA-DMB-258ENST00000418107 SYS1-DBNDD2H3BUS1 97 aa9.27□□□□□ -0.93
HLA-DMB-258ENST00000418107 TSHBP01222 138 aa9.27□□□□□ -0.93
HLA-DMB-258ENST00000418107 PRSS1P07477 247 aa9.27□□□□□ -0.93
HLA-DMB-258ENST00000418107 COTL1Q14019 142 aa9.27□□□□□ -0.93
HLA-DMB-258ENST00000418107 C2orf66Q6UXQ4 117 aa9.27□□□□□ -0.93
HLA-DMB-258ENST00000418107 CELA1Q9UNI1 258 aa9.27□□□□□ -0.93
HLA-DMB-258ENST00000418107 HHLA3Q9XRX5 114 aa9.27□□□□□ -0.93
HLA-DMB-258ENST00000418107 KLK5Q9Y337 293 aaPredicted RBP9.27□□□□□ -0.93
HLA-DMB-258ENST00000418107 ATP5G1P05496 136 aa9.26□□□□□ -0.93
HLA-DMB-258ENST00000418107 HTN3P15516 51 aa9.26□□□□□ -0.93
HLA-DMB-258ENST00000418107 PET117Q6UWS5 81 aa9.26□□□□□ -0.93
HLA-DMB-258ENST00000418107 TOMM6Q96B49 74 aa9.26□□□□□ -0.93
HLA-DMB-258ENST00000418107 LINC01549A6NIU2 74 aa9.25□□□□□ -0.93
HLA-DMB-258ENST00000418107 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.25□□□□□ -0.93
HLA-DMB-258ENST00000418107 Q6ZN92 141 aa9.25□□□□□ -0.93
HLA-DMB-258ENST00000418107 LOC100131303A0A0U1RQF7 123 aa9.24□□□□□ -0.93
HLA-DMB-258ENST00000418107 F5H768 121 aa9.24□□□□□ -0.93
HLA-DMB-258ENST00000418107 CDPF1Q6NVV7 123 aa9.24□□□□□ -0.93
HLA-DMB-258ENST00000418107 DAZ4Q86SG3 579 aaKnown RBP9.24□□□□□ -0.93
HLA-DMB-258ENST00000418107 DAZ3Q9NR90 486 aaKnown RBP9.24□□□□□ -0.93
HLA-DMB-258ENST00000418107 PRO0255Q9UI72 69 aa9.24□□□□□ -0.93
HLA-DMB-258ENST00000418107 PAX4O43316 350 aa9.24□□□□□ -0.93
HLA-DMB-258ENST00000418107 GYPEP15421 78 aa9.24□□□□□ -0.93
HLA-DMB-258ENST00000418107 UBE2D3P61077 147 aa9.24□□□□□ -0.93
HLA-DMB-258ENST00000418107 UBE2D2P62837 147 aa9.24□□□□□ -0.93
HLA-DMB-258ENST00000418107 RPL39P62891 51 aaKnown RBP9.24□□□□□ -0.93
HLA-DMB-258ENST00000418107 LGALS9CQ6DKI2 356 aa9.24□□□□□ -0.93
HLA-DMB-258ENST00000418107 C11orf68Q9H3H3 251 aaKnown RBP9.24□□□□□ -0.93
HLA-DMB-258ENST00000418107 CRYBA4P53673 196 aa9.23□□□□□ -0.93
HLA-DMB-258ENST00000418107 ERASQ7Z444 233 aa9.23□□□□□ -0.93
HLA-DMB-258ENST00000418107 FAT2Q9NYQ8 4349 aa9.23□□□□□ -0.93
HLA-DMB-258ENST00000418107 A0A0J9YY99 117 aa9.22□□□□□ -0.93
HLA-DMB-258ENST00000418107 ATOH7Q8N100 152 aa9.22□□□□□ -0.93
HLA-DMB-258ENST00000418107 Q8N976 141 aa9.22□□□□□ -0.93
HLA-DMB-258ENST00000418107 C20orf203Q8NBC4 194 aa9.22□□□□□ -0.93
HLA-DMB-258ENST00000418107 TMEM141Q96I45 108 aa9.22□□□□□ -0.93
HLA-DMB-258ENST00000418107 PMCHL2Q9BQD1 86 aa9.22□□□□□ -0.93
HLA-DMB-258ENST00000418107 VAMP8Q9BV40 100 aa9.22□□□□□ -0.93
HLA-DMB-258ENST00000418107 DNAH2Q9P225 4427 aa9.21□□□□□ -0.93
HLA-DMB-258ENST00000418107 LINC01545Q5VT33 79 aa9.21□□□□□ -0.94
HLA-DMB-258ENST00000418107 SPATA12Q7Z6I5 190 aa9.21□□□□□ -0.94
HLA-DMB-258ENST00000418107 DYNC1H1Q14204 4646 aaKnown RBP9.21□□□□□ -0.94
HLA-DMB-258ENST00000418107 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.2□□□□□ -0.94
HLA-DMB-258ENST00000418107 IGKV2-29A2NJV5 120 aaPredicted RBP9.2□□□□□ -0.94
HLA-DMB-258ENST00000418107 C12orf74Q32Q52 190 aa9.2□□□□□ -0.94
HLA-DMB-258ENST00000418107 TEX43Q6ZNM6 134 aa9.2□□□□□ -0.94
HLA-DMB-258ENST00000418107 PKHD1P08F94 4074 aa9.2□□□□□ -0.94
HLA-DMB-258ENST00000418107 TRAV26-1A0A087WT03 109 aa9.19□□□□□ -0.94
HLA-DMB-258ENST00000418107 HSBP1L1C9JCN9 74 aa9.19□□□□□ -0.94
HLA-DMB-258ENST00000418107 UBE2L6O14933 153 aa9.19□□□□□ -0.94
HLA-DMB-258ENST00000418107 SMAGPQ0VAQ4 97 aa9.19□□□□□ -0.94
HLA-DMB-258ENST00000418107 TMEM97Q5BJF2 176 aa9.19□□□□□ -0.94
HLA-DMB-258ENST00000418107 DGAT2L7PQ6IED9 249 aa9.19□□□□□ -0.94
HLA-DMB-258ENST00000418107 ATP6V0E2Q8NHE4 81 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms