RNA–Protein interactions for RNA: ENST00000417231.5

UBE2F-207, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 984 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-207ENST00000417231 GFRA4Q9GZZ7 299 aa12.87□□□□□ -0.35
UBE2F-207ENST00000417231 PLA2G1BP04054 148 aaKnown RBP12.86□□□□□ -0.35
UBE2F-207ENST00000417231 CIRBP-AS1Q8TBR5 109 aa12.86□□□□□ -0.35
UBE2F-207ENST00000417231 CNFNQ9BYD5 112 aa12.86□□□□□ -0.35
UBE2F-207ENST00000417231 FLG2Q5D862 2391 aaPredicted RBP12.86□□□□□ -0.35
UBE2F-207ENST00000417231 TMEM250H0YL14 139 aa12.85□□□□□ -0.35
UBE2F-207ENST00000417231 GATCO43716 136 aaKnown RBP12.85□□□□□ -0.35
UBE2F-207ENST00000417231 LYPD6BQ8NI32 183 aa12.85□□□□□ -0.35
UBE2F-207ENST00000417231 AMTP48728 403 aa12.84□□□□□ -0.35
UBE2F-207ENST00000417231 COTL1Q14019 142 aa12.84□□□□□ -0.35
UBE2F-207ENST00000417231 RPL39LQ96EH5 51 aaKnown RBP12.84□□□□□ -0.35
UBE2F-207ENST00000417231 PGLYRP4Q96LB8 373 aa12.84□□□□□ -0.35
UBE2F-207ENST00000417231 A0A1B0GUV1 79 aa12.83□□□□□ -0.36
UBE2F-207ENST00000417231 UBE2L6O14933 153 aa12.82□□□□□ -0.36
UBE2F-207ENST00000417231 EIF5A2Q9GZV4 153 aaKnown RBP12.82□□□□□ -0.36
UBE2F-207ENST00000417231 DMBT1Q9UGM3 2413 aaPredicted RBP12.81□□□□□ -0.36
UBE2F-207ENST00000417231 SMIM15Q7Z3B0 74 aa12.81□□□□□ -0.36
UBE2F-207ENST00000417231 A0A1B0GVG6 124 aa12.8□□□□□ -0.36
UBE2F-207ENST00000417231 A8MWL6 223 aa12.8□□□□□ -0.36
UBE2F-207ENST00000417231 DGAT2L7PQ6IED9 249 aa12.8□□□□□ -0.36
UBE2F-207ENST00000417231 FAM231DQ6ZW35 169 aa12.8□□□□□ -0.36
UBE2F-207ENST00000417231 TRAV8-4A0A0B4J246 113 aa12.79□□□□□ -0.36
UBE2F-207ENST00000417231 IGKV3OR2-268A0A0C4DH90 116 aa12.79□□□□□ -0.36
UBE2F-207ENST00000417231 C9orf163Q8N9P6 203 aa12.79□□□□□ -0.36
UBE2F-207ENST00000417231 SMIM7Q9BQ49 75 aa12.79□□□□□ -0.36
UBE2F-207ENST00000417231 hDV102S1A0JD36 115 aa12.77□□□□□ -0.37
UBE2F-207ENST00000417231 J3QL48 77 aa12.77□□□□□ -0.37
UBE2F-207ENST00000417231 GAS8-AS1O95177 125 aa12.77□□□□□ -0.37
UBE2F-207ENST00000417231 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.76□□□□□ -0.37
UBE2F-207ENST00000417231 IGKV2-29A2NJV5 120 aaPredicted RBP12.76□□□□□ -0.37
UBE2F-207ENST00000417231 PANO1I0J062 215 aa12.76□□□□□ -0.37
UBE2F-207ENST00000417231 KRTAP10-4P60372 401 aaPredicted RBP12.76□□□□□ -0.37
UBE2F-207ENST00000417231 LINC01551Q86U37 167 aa12.76□□□□□ -0.37
UBE2F-207ENST00000417231 CLRN3Q8NCR9 226 aa12.76□□□□□ -0.37
UBE2F-207ENST00000417231 FAM210AQ96ND0 272 aa12.76□□□□□ -0.37
UBE2F-207ENST00000417231 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.76□□□□□ -0.37
UBE2F-207ENST00000417231 SDHAF1A6NFY7 115 aa12.75□□□□□ -0.37
UBE2F-207ENST00000417231 ZNF727A8MUV8 499 aa12.75□□□□□ -0.37
UBE2F-207ENST00000417231 SRP19P09132 144 aaKnown RBP12.75□□□□□ -0.37
UBE2F-207ENST00000417231 AMMECR1LQ6DCA0 310 aa12.75□□□□□ -0.37
UBE2F-207ENST00000417231 SDIM1Q6ZPB5 146 aa12.75□□□□□ -0.37
UBE2F-207ENST00000417231 GAGE12HA6NDE8 117 aa12.74□□□□□ -0.37
UBE2F-207ENST00000417231 SLPIP03973 132 aa12.74□□□□□ -0.37
UBE2F-207ENST00000417231 PMCHP20382 165 aa12.74□□□□□ -0.37
UBE2F-207ENST00000417231 CT83Q5H943 113 aa12.74□□□□□ -0.37
UBE2F-207ENST00000417231 RNASEKQ6P5S7 137 aaKnown RBP12.74□□□□□ -0.37
UBE2F-207ENST00000417231 TEX261Q6UWH6 196 aa12.74□□□□□ -0.37
UBE2F-207ENST00000417231 BORCS7Q96B45 105 aa12.74□□□□□ -0.37
UBE2F-207ENST00000417231 HIGD1CA8MV81 97 aa12.73□□□□□ -0.37
UBE2F-207ENST00000417231 TSKUQ8WUA8 353 aa12.73□□□□□ -0.37
UBE2F-207ENST00000417231 FAM231BA6NCW3 169 aa12.72□□□□□ -0.37
UBE2F-207ENST00000417231 NCR2O95944 276 aa12.72□□□□□ -0.37
UBE2F-207ENST00000417231 APCSP02743 223 aa12.72□□□□□ -0.37
UBE2F-207ENST00000417231 A0A1B0GUT8 65 aa12.71□□□□□ -0.37
UBE2F-207ENST00000417231 I3L3M4 83 aa12.71□□□□□ -0.37
UBE2F-207ENST00000417231 FGF6P10767 208 aa12.71□□□□□ -0.37
UBE2F-207ENST00000417231 OSTCQ9NRP0 149 aa12.71□□□□□ -0.37
UBE2F-207ENST00000417231 TRBV6-5A0A0K0K1A5 114 aa12.7□□□□□ -0.38
UBE2F-207ENST00000417231 CNBPP62633 177 aaKnown RBP12.7□□□□□ -0.38
UBE2F-207ENST00000417231 RNF185Q96GF1 192 aa12.7□□□□□ -0.38
UBE2F-207ENST00000417231 AP5S1Q9NUS5 200 aa12.7□□□□□ -0.38
UBE2F-207ENST00000417231 KRTAP29-1A8MX34 341 aaPredicted RBP12.69□□□□□ -0.38
UBE2F-207ENST00000417231 RAB4AP20338 218 aa12.69□□□□□ -0.38
UBE2F-207ENST00000417231 RPS10P46783 165 aaKnown RBP12.69□□□□□ -0.38
UBE2F-207ENST00000417231 AMN1Q8IY45 258 aa12.69□□□□□ -0.38
UBE2F-207ENST00000417231 C15orf56Q8N910 161 aa12.69□□□□□ -0.38
UBE2F-207ENST00000417231 CHCHD10Q8WYQ3 142 aaPredicted RBP12.69□□□□□ -0.38
UBE2F-207ENST00000417231 DPH3Q96FX2 82 aa12.69□□□□□ -0.38
UBE2F-207ENST00000417231 TMEM191AQ9H0A3 160 aa12.69□□□□□ -0.38
UBE2F-207ENST00000417231 ST20Q9HBF5 79 aa12.69□□□□□ -0.38
UBE2F-207ENST00000417231 V9GYV3 84 aa12.69□□□□□ -0.38
UBE2F-207ENST00000417231 C9JQL5 133 aa12.68□□□□□ -0.38
UBE2F-207ENST00000417231 H7C423 109 aa12.68□□□□□ -0.38
UBE2F-207ENST00000417231 NDUFS6O75380 124 aaKnown RBP12.68□□□□□ -0.38
UBE2F-207ENST00000417231 TSHBP01222 138 aa12.68□□□□□ -0.38
UBE2F-207ENST00000417231 RPL37AP61513 92 aaKnown RBP12.68□□□□□ -0.38
UBE2F-207ENST00000417231 TMEM241Q24JQ0 296 aa12.68□□□□□ -0.38
UBE2F-207ENST00000417231 HIGD2BQ4VC39 106 aa12.68□□□□□ -0.38
UBE2F-207ENST00000417231 TMEM242Q9NWH2 141 aa12.68□□□□□ -0.38
UBE2F-207ENST00000417231 SMKR1H3BMG3 65 aa12.67□□□□□ -0.38
UBE2F-207ENST00000417231 IGHV3-64A0A075B6Q5 118 aa12.66□□□□□ -0.38
UBE2F-207ENST00000417231 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.66□□□□□ -0.38
UBE2F-207ENST00000417231 CHTF8P0CG12 524 aa12.66□□□□□ -0.38
UBE2F-207ENST00000417231 ESDP10768 282 aa12.66□□□□□ -0.38
UBE2F-207ENST00000417231 SRSF3P84103 164 aaKnown RBP12.66□□□□□ -0.38
UBE2F-207ENST00000417231 NUP35Q8NFH5 326 aa12.66□□□□□ -0.38
UBE2F-207ENST00000417231 ISOC2Q96AB3 205 aa12.66□□□□□ -0.38
UBE2F-207ENST00000417231 LRP1Q07954 4544 aaKnown RBP12.65□□□□□ -0.38
UBE2F-207ENST00000417231 POLR2KP53803 58 aaKnown RBP12.65□□□□□ -0.38
UBE2F-207ENST00000417231 RPL23P62829 140 aaKnown RBP12.65□□□□□ -0.38
UBE2F-207ENST00000417231 CFAP161Q6P656 301 aa12.65□□□□□ -0.38
UBE2F-207ENST00000417231 BTF3L4Q96K17 158 aa12.65□□□□□ -0.38
UBE2F-207ENST00000417231 RIGQ13278 110 aa12.64□□□□□ -0.39
UBE2F-207ENST00000417231 ADIRFQ15847 76 aa12.64□□□□□ -0.39
UBE2F-207ENST00000417231 OR5A1Q8NGJ0 315 aa12.64□□□□□ -0.39
UBE2F-207ENST00000417231 MRAP2Q96G30 205 aa12.64□□□□□ -0.39
UBE2F-207ENST00000417231 TMEM101Q96IK0 257 aa12.64□□□□□ -0.39
UBE2F-207ENST00000417231 XCL1P47992 114 aa12.63□□□□□ -0.39
UBE2F-207ENST00000417231 HNRNPA3P51991 378 aaKnown RBP12.63□□□□□ -0.39
UBE2F-207ENST00000417231 FOXI1Q12951 378 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms