RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 ZNF479Q96JC4 524 aa11.83□□□□□ -0.52
SCAMP4-204ENST00000414057 IGHV1-24A0A0C4DH33 117 aa11.82□□□□□ -0.52
SCAMP4-204ENST00000414057 TRBV27A0A0K0K1C4 114 aa11.82□□□□□ -0.52
SCAMP4-204ENST00000414057 VCYO14598 125 aa11.82□□□□□ -0.52
SCAMP4-204ENST00000414057 ORMDL2Q53FV1 153 aa11.82□□□□□ -0.52
SCAMP4-204ENST00000414057 TMEM70Q9BUB7 260 aa11.82□□□□□ -0.52
SCAMP4-204ENST00000414057 SDHAF1A6NFY7 115 aa11.81□□□□□ -0.52
SCAMP4-204ENST00000414057 LAGE3Q14657 143 aa11.81□□□□□ -0.52
SCAMP4-204ENST00000414057 FAM19A2Q8N3H0 131 aa11.81□□□□□ -0.52
SCAMP4-204ENST00000414057 OR10D4PQ8NGN7 298 aa11.81□□□□□ -0.52
SCAMP4-204ENST00000414057 TNFRSF18Q9Y5U5 241 aa11.81□□□□□ -0.52
SCAMP4-204ENST00000414057 TRBV6-4A0A1B0GX49 114 aa11.8□□□□□ -0.52
SCAMP4-204ENST00000414057 PRSS29PA6NIE9 313 aa11.8□□□□□ -0.52
SCAMP4-204ENST00000414057 K7EQD1 137 aa11.8□□□□□ -0.52
SCAMP4-204ENST00000414057 HBDP02042 147 aa11.8□□□□□ -0.52
SCAMP4-204ENST00000414057 G0S2P27469 103 aa11.8□□□□□ -0.52
SCAMP4-204ENST00000414057 KIR2DL4Q99706 377 aa11.8□□□□□ -0.52
SCAMP4-204ENST00000414057 HECTD4Q9Y4D8 3996 aa11.79□□□□□ -0.52
SCAMP4-204ENST00000414057 TRGV4A0A0C4DH28 118 aa11.78□□□□□ -0.52
SCAMP4-204ENST00000414057 LINC01549A6NIU2 74 aa11.78□□□□□ -0.52
SCAMP4-204ENST00000414057 LEPROTL1O95214 131 aa11.78□□□□□ -0.52
SCAMP4-204ENST00000414057 FCER1GP30273 86 aa11.78□□□□□ -0.52
SCAMP4-204ENST00000414057 Q6ZSN1 163 aa11.78□□□□□ -0.52
SCAMP4-204ENST00000414057 NEXN-AS1Q8NBZ9 246 aa11.78□□□□□ -0.52
SCAMP4-204ENST00000414057 HSPB8Q9UJY1 196 aa11.78□□□□□ -0.52
SCAMP4-204ENST00000414057 I3L3M4 83 aa11.77□□□□□ -0.52
SCAMP4-204ENST00000414057 NUDT3O95989 172 aa11.77□□□□□ -0.52
SCAMP4-204ENST00000414057 CCL18P55774 89 aa11.77□□□□□ -0.52
SCAMP4-204ENST00000414057 Q6ZR54 194 aa11.77□□□□□ -0.52
SCAMP4-204ENST00000414057 RTL8CO15255 209 aa11.76□□□□□ -0.53
SCAMP4-204ENST00000414057 RPL36AP83881 106 aaKnown RBP11.76□□□□□ -0.53
SCAMP4-204ENST00000414057 FHL2Q14192 279 aa11.76□□□□□ -0.53
SCAMP4-204ENST00000414057 RHOHQ15669 191 aa11.76□□□□□ -0.53
SCAMP4-204ENST00000414057 SLC25A29Q8N8R3 303 aa11.76□□□□□ -0.53
SCAMP4-204ENST00000414057 RPL36ALQ969Q0 106 aaKnown RBP11.76□□□□□ -0.53
SCAMP4-204ENST00000414057 A0A096LNJ9 63 aa11.76□□□□□ -0.53
SCAMP4-204ENST00000414057 PMCHL1Q16048 86 aa11.76□□□□□ -0.53
SCAMP4-204ENST00000414057 PRADC1Q9BSG0 188 aa11.76□□□□□ -0.53
SCAMP4-204ENST00000414057 TRBV7-3A0A075B6L6 115 aa11.75□□□□□ -0.53
SCAMP4-204ENST00000414057 SMIM6P0DI80 62 aa11.75□□□□□ -0.53
SCAMP4-204ENST00000414057 C1orf134Q5TEV5 83 aa11.75□□□□□ -0.53
SCAMP4-204ENST00000414057 A0A1B0GVY2 172 aa11.74□□□□□ -0.53
SCAMP4-204ENST00000414057 DNAH2Q9P225 4427 aa11.74□□□□□ -0.53
SCAMP4-204ENST00000414057 PRO0255Q9UI72 69 aa11.73□□□□□ -0.53
SCAMP4-204ENST00000414057 HHLA3Q9XRX5 114 aa11.73□□□□□ -0.53
SCAMP4-204ENST00000414057 FAT2Q9NYQ8 4349 aa11.72□□□□□ -0.53
SCAMP4-204ENST00000414057 JOSD1Q15040 202 aaPredicted RBP11.72□□□□□ -0.53
SCAMP4-204ENST00000414057 DAZ4Q86SG3 579 aaKnown RBP11.72□□□□□ -0.53
SCAMP4-204ENST00000414057 MAP1LC3CQ9BXW4 147 aa11.72□□□□□ -0.53
SCAMP4-204ENST00000414057 DAZ3Q9NR90 486 aaKnown RBP11.72□□□□□ -0.53
SCAMP4-204ENST00000414057 TSHBP01222 138 aa11.71□□□□□ -0.53
SCAMP4-204ENST00000414057 BTF3P20290 206 aaKnown RBP11.71□□□□□ -0.53
SCAMP4-204ENST00000414057 NEGR1Q7Z3B1 354 aa11.71□□□□□ -0.53
SCAMP4-204ENST00000414057 ZNRF2Q8NHG8 242 aa11.71□□□□□ -0.53
SCAMP4-204ENST00000414057 TOMM6Q96B49 74 aa11.71□□□□□ -0.53
SCAMP4-204ENST00000414057 TRAV26-1A0A087WT03 109 aa11.7□□□□□ -0.54
SCAMP4-204ENST00000414057 H3BNG1 76 aa11.7□□□□□ -0.54
SCAMP4-204ENST00000414057 ATP5LO75964 103 aa11.7□□□□□ -0.54
SCAMP4-204ENST00000414057 C3orf79P0CE67 100 aa11.7□□□□□ -0.54
SCAMP4-204ENST00000414057 KRTDAPP60985 99 aa11.7□□□□□ -0.54
SCAMP4-204ENST00000414057 UBE2D3P61077 147 aa11.7□□□□□ -0.54
SCAMP4-204ENST00000414057 UBE2D2P62837 147 aa11.7□□□□□ -0.54
SCAMP4-204ENST00000414057 CYSLTR1Q9Y271 337 aa11.7□□□□□ -0.54
SCAMP4-204ENST00000414057 NBDYA0A0U1RRE5 68 aa11.7□□□□□ -0.54
SCAMP4-204ENST00000414057 CRYBA4P53673 196 aa11.7□□□□□ -0.54
SCAMP4-204ENST00000414057 COTL1Q14019 142 aa11.7□□□□□ -0.54
SCAMP4-204ENST00000414057 PYY3Q5JQD4 70 aa11.7□□□□□ -0.54
SCAMP4-204ENST00000414057 C2orf66Q6UXQ4 117 aa11.7□□□□□ -0.54
SCAMP4-204ENST00000414057 LINC00588Q9Y4M8 146 aa11.7□□□□□ -0.54
SCAMP4-204ENST00000414057 DNAH17Q9UFH2 4485 aa11.69□□□□□ -0.54
SCAMP4-204ENST00000414057 SPATA12Q7Z6I5 190 aa11.69□□□□□ -0.54
SCAMP4-204ENST00000414057 Q9UF83 564 aa11.69□□□□□ -0.54
SCAMP4-204ENST00000414057 GAGE12JA6NER3 117 aa11.68□□□□□ -0.54
SCAMP4-204ENST00000414057 LINC00694P0DN24 101 aa11.68□□□□□ -0.54
SCAMP4-204ENST00000414057 GAGE1Q13065 139 aa11.68□□□□□ -0.54
SCAMP4-204ENST00000414057 GAGE4Q13068 117 aa11.68□□□□□ -0.54
SCAMP4-204ENST00000414057 GAGE5Q13069 117 aa11.68□□□□□ -0.54
SCAMP4-204ENST00000414057 GAGE13Q4V321 117 aa11.68□□□□□ -0.54
SCAMP4-204ENST00000414057 TMEM97Q5BJF2 176 aa11.68□□□□□ -0.54
SCAMP4-204ENST00000414057 PET117Q6UWS5 81 aa11.68□□□□□ -0.54
SCAMP4-204ENST00000414057 IFI27L1Q96BM0 104 aa11.68□□□□□ -0.54
SCAMP4-204ENST00000414057 HERC2O95714 4834 aa11.67□□□□□ -0.54
SCAMP4-204ENST00000414057 A0A0J9YY99 117 aa11.67□□□□□ -0.54
SCAMP4-204ENST00000414057 C20orf202A1L168 122 aa11.67□□□□□ -0.54
SCAMP4-204ENST00000414057 SYS1-DBNDD2H3BUS1 97 aa11.67□□□□□ -0.54
SCAMP4-204ENST00000414057 C6orf223Q8N319 242 aa11.67□□□□□ -0.54
SCAMP4-204ENST00000414057 C20orf203Q8NBC4 194 aa11.67□□□□□ -0.54
SCAMP4-204ENST00000414057 GTSF1LQ9H1H1 148 aa11.67□□□□□ -0.54
SCAMP4-204ENST00000414057 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.66□□□□□ -0.54
SCAMP4-204ENST00000414057 PAX4O43316 350 aa11.66□□□□□ -0.54
SCAMP4-204ENST00000414057 SCGB1D1O95968 90 aa11.66□□□□□ -0.54
SCAMP4-204ENST00000414057 LINC00173Q6ZV60 143 aa11.66□□□□□ -0.54
SCAMP4-204ENST00000414057 ERASQ7Z444 233 aa11.66□□□□□ -0.54
SCAMP4-204ENST00000414057 LINC00518Q8N0U6 118 aa11.66□□□□□ -0.54
SCAMP4-204ENST00000414057 Q9H8V8 135 aa11.66□□□□□ -0.54
SCAMP4-204ENST00000414057 TTC32Q5I0X7 151 aa11.65□□□□□ -0.54
SCAMP4-204ENST00000414057 TMEM141Q96I45 108 aa11.65□□□□□ -0.54
SCAMP4-204ENST00000414057 SCGB3A1Q96QR1 104 aa11.65□□□□□ -0.54
SCAMP4-204ENST00000414057 TIMM17AQ99595 171 aa11.65□□□□□ -0.54
SCAMP4-204ENST00000414057 NPSP0C0P6 89 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms