RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 NBEAQ8NFP9 2946 aa6.49□□□□□ -1.37
SYNE1-211ENST00000413186 SETD2Q9BYW2 2564 aaPredicted RBP6.49□□□□□ -1.37
SYNE1-211ENST00000413186 K7EP13 123 aa6.49□□□□□ -1.37
SYNE1-211ENST00000413186 C8orf49Q96NF6 230 aa6.49□□□□□ -1.37
SYNE1-211ENST00000413186 Q6ZS46 218 aa6.49□□□□□ -1.37
SYNE1-211ENST00000413186 ZFAND3Q9H8U3 227 aa6.49□□□□□ -1.37
SYNE1-211ENST00000413186 AKAP13Q12802 2813 aa6.49□□□□□ -1.37
SYNE1-211ENST00000413186 VCYO14598 125 aa6.49□□□□□ -1.37
SYNE1-211ENST00000413186 RPL36AP83881 106 aaKnown RBP6.49□□□□□ -1.37
SYNE1-211ENST00000413186 ZNF876PQ49A33 203 aa6.49□□□□□ -1.37
SYNE1-211ENST00000413186 RPL36ALQ969Q0 106 aaKnown RBP6.49□□□□□ -1.37
SYNE1-211ENST00000413186 ZMAT4Q9H898 229 aa6.49□□□□□ -1.37
SYNE1-211ENST00000413186 A4D1N5 150 aa6.49□□□□□ -1.37
SYNE1-211ENST00000413186 C10orf99Q6UWK7 81 aa6.49□□□□□ -1.37
SYNE1-211ENST00000413186 ZNF493Q6ZR52 646 aa6.49□□□□□ -1.37
SYNE1-211ENST00000413186 SCRT2Q9NQ03 307 aa6.48□□□□□ -1.37
SYNE1-211ENST00000413186 TMEM213A2RRL7 107 aa6.48□□□□□ -1.37
SYNE1-211ENST00000413186 K7EMI3 77 aa6.48□□□□□ -1.37
SYNE1-211ENST00000413186 C9orf47Q6ZRZ4 202 aa6.48□□□□□ -1.37
SYNE1-211ENST00000413186 NTN5Q8WTR8 489 aaPredicted RBP6.48□□□□□ -1.37
SYNE1-211ENST00000413186 PLEKHB2Q96CS7 222 aa6.48□□□□□ -1.37
SYNE1-211ENST00000413186 ZC2HC1AQ96GY0 325 aa6.48□□□□□ -1.37
SYNE1-211ENST00000413186 DEFB114Q30KQ6 69 aa6.48□□□□□ -1.37
SYNE1-211ENST00000413186 ATMQ13315 3056 aa6.48□□□□□ -1.37
SYNE1-211ENST00000413186 H3BT86 120 aa6.48□□□□□ -1.37
SYNE1-211ENST00000413186 DEFB104AQ8WTQ1 72 aa6.48□□□□□ -1.37
SYNE1-211ENST00000413186 CARD19Q96LW7 228 aa6.48□□□□□ -1.37
SYNE1-211ENST00000413186 CSTL1Q9H114 145 aa6.47□□□□□ -1.37
SYNE1-211ENST00000413186 ESM1Q9NQ30 184 aa6.47□□□□□ -1.37
SYNE1-211ENST00000413186 APRG1Q8IVJ8 170 aa6.47□□□□□ -1.37
SYNE1-211ENST00000413186 DEFB105AQ8NG35 78 aa6.47□□□□□ -1.37
SYNE1-211ENST00000413186 K7EQG2 157 aa6.47□□□□□ -1.37
SYNE1-211ENST00000413186 TIMM17BO60830 172 aa6.47□□□□□ -1.37
SYNE1-211ENST00000413186 TEX48A0A1B0GUV7 120 aa6.47□□□□□ -1.37
SYNE1-211ENST00000413186 Q8N8P6 123 aa6.47□□□□□ -1.37
SYNE1-211ENST00000413186 SMAD5-AS1Q9Y6J3 95 aa6.47□□□□□ -1.37
SYNE1-211ENST00000413186 DEFB130BP0DP73 79 aa6.46□□□□□ -1.37
SYNE1-211ENST00000413186 DEFB130AP0DP74 79 aa6.46□□□□□ -1.37
SYNE1-211ENST00000413186 A0A0J9YX75 114 aa6.46□□□□□ -1.38
SYNE1-211ENST00000413186 C20orf197Q8N268 126 aa6.46□□□□□ -1.38
SYNE1-211ENST00000413186 C14orf178Q8N769 122 aaPredicted RBP6.46□□□□□ -1.38
SYNE1-211ENST00000413186 MGAQ8IWI9 3026 aa6.46□□□□□ -1.38
SYNE1-211ENST00000413186 MYMXA0A1B0GTQ4 84 aa6.46□□□□□ -1.38
SYNE1-211ENST00000413186 FSHBP01225 129 aa6.45□□□□□ -1.38
SYNE1-211ENST00000413186 PFN2P35080 140 aa6.45□□□□□ -1.38
SYNE1-211ENST00000413186 FGF6P10767 208 aa6.45□□□□□ -1.38
SYNE1-211ENST00000413186 NXPH4O95158 308 aa6.45□□□□□ -1.38
SYNE1-211ENST00000413186 MAP6D1Q9H9H5 199 aa6.45□□□□□ -1.38
SYNE1-211ENST00000413186 NREPQ16612 68 aa6.45□□□□□ -1.38
SYNE1-211ENST00000413186 LGALS9BQ3B8N2 356 aa6.45□□□□□ -1.38
SYNE1-211ENST00000413186 LGALS9CQ6DKI2 356 aa6.45□□□□□ -1.38
SYNE1-211ENST00000413186 TEX43Q6ZNM6 134 aa6.45□□□□□ -1.38
SYNE1-211ENST00000413186 Q8N2B8 174 aa6.45□□□□□ -1.38
SYNE1-211ENST00000413186 ODF3Q96PU9 254 aa6.45□□□□□ -1.38
SYNE1-211ENST00000413186 C20orf78Q9BR46 151 aa6.45□□□□□ -1.38
SYNE1-211ENST00000413186 F8W1H4 67 aa6.44□□□□□ -1.38
SYNE1-211ENST00000413186 NPSP0C0P6 89 aa6.44□□□□□ -1.38
SYNE1-211ENST00000413186 MRPL51Q4U2R6 128 aaKnown RBP6.44□□□□□ -1.38
SYNE1-211ENST00000413186 RNASE13Q5GAN3 156 aaKnown RBP6.44□□□□□ -1.38
SYNE1-211ENST00000413186 ZNF503Q96F45 646 aa6.44□□□□□ -1.38
SYNE1-211ENST00000413186 PRR31Q5SQ13 230 aa6.44□□□□□ -1.38
SYNE1-211ENST00000413186 Q6ZWC4 215 aa6.44□□□□□ -1.38
SYNE1-211ENST00000413186 FAM236DA0A1B0GTK5 79 aa6.44□□□□□ -1.38
SYNE1-211ENST00000413186 FAM236CP0DP71 79 aa6.44□□□□□ -1.38
SYNE1-211ENST00000413186 ZC2HC1BQ5TFG8 222 aa6.44□□□□□ -1.38
SYNE1-211ENST00000413186 TRPT1Q86TN4 253 aaKnown RBP6.44□□□□□ -1.38
SYNE1-211ENST00000413186 CSDC2Q9Y534 153 aaKnown RBP6.44□□□□□ -1.38
SYNE1-211ENST00000413186 PRSS29PA6NIE9 313 aa6.44□□□□□ -1.38
SYNE1-211ENST00000413186 PRAC2D3DTV9 90 aa6.44□□□□□ -1.38
SYNE1-211ENST00000413186 IGHV3-53P01767 116 aa6.44□□□□□ -1.38
SYNE1-211ENST00000413186 C16orf74Q96GX8 76 aa6.43□□□□□ -1.38
SYNE1-211ENST00000413186 C19orf71A6NCJ1 209 aa6.43□□□□□ -1.38
SYNE1-211ENST00000413186 MED14OSP0DP75 135 aa6.43□□□□□ -1.38
SYNE1-211ENST00000413186 DSPP15924 2871 aaKnown RBP6.43□□□□□ -1.38
SYNE1-211ENST00000413186 IGSF10Q6WRI0 2623 aa6.43□□□□□ -1.38
SYNE1-211ENST00000413186 HIST2H2BDQ6DRA6 164 aa6.43□□□□□ -1.38
SYNE1-211ENST00000413186 AMTNQ6UX39 209 aa6.43□□□□□ -1.38
SYNE1-211ENST00000413186 TMEM141Q96I45 108 aa6.43□□□□□ -1.38
SYNE1-211ENST00000413186 A0A096LNT2 108 aa6.43□□□□□ -1.38
SYNE1-211ENST00000413186 TRAV26-2A0A0B4J265 109 aa6.43□□□□□ -1.38
SYNE1-211ENST00000413186 YPEL4Q96NS1 127 aa6.43□□□□□ -1.38
SYNE1-211ENST00000413186 A0A087WWL8 130 aa6.42□□□□□ -1.38
SYNE1-211ENST00000413186 IGHV3-73A0A0B4J1V6 119 aa6.42□□□□□ -1.38
SYNE1-211ENST00000413186 CRYGDP07320 174 aa6.42□□□□□ -1.38
SYNE1-211ENST00000413186 NDUFV3P56181 108 aaKnown RBP6.42□□□□□ -1.38
SYNE1-211ENST00000413186 CFAP46Q8IYW2 2715 aa6.42□□□□□ -1.38
SYNE1-211ENST00000413186 HRCT1Q6UXD1 115 aa6.42□□□□□ -1.38
SYNE1-211ENST00000413186 PROK1P58294 105 aa6.42□□□□□ -1.38
SYNE1-211ENST00000413186 IGLC3P0DOY3 106 aa6.41□□□□□ -1.38
SYNE1-211ENST00000413186 UBE2BP63146 152 aa6.41□□□□□ -1.38
SYNE1-211ENST00000413186 SPINT4Q6UDR6 99 aa6.41□□□□□ -1.38
SYNE1-211ENST00000413186 ADGRG4Q8IZF6 3080 aa6.41□□□□□ -1.38
SYNE1-211ENST00000413186 K7ERJ3 54 aa6.41□□□□□ -1.38
SYNE1-211ENST00000413186 SPART-AS1P0CW21 52 aa6.41□□□□□ -1.38
SYNE1-211ENST00000413186 MRGPRG-AS1Q2M3A8 158 aa6.41□□□□□ -1.38
SYNE1-211ENST00000413186 H0Y9J4 135 aa6.41□□□□□ -1.38
SYNE1-211ENST00000413186 CTRLP40313 264 aa6.41□□□□□ -1.38
SYNE1-211ENST00000413186 ZNF561-AS1K7EIQ3 104 aa6.41□□□□□ -1.38
SYNE1-211ENST00000413186 IGLL1P15814 213 aa6.41□□□□□ -1.38
SYNE1-211ENST00000413186 KIR2DL5BA0A0G2JN68 375 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms