RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 BDP1A6H8Y1 2624 aa13.3□□□□□ -0.28
SMPD4-202ENST00000409031 POLR2KP53803 58 aaKnown RBP13.3□□□□□ -0.28
SMPD4-202ENST00000409031 TRBV12-3P01733 135 aa13.29□□□□□ -0.28
SMPD4-202ENST00000409031 IGF1P05019 195 aa13.29□□□□□ -0.28
SMPD4-202ENST00000409031 DAD1P61803 113 aa13.29□□□□□ -0.28
SMPD4-202ENST00000409031 CDIP1Q9H305 208 aa13.29□□□□□ -0.28
SMPD4-202ENST00000409031 C11orf21Q9P2W6 132 aa13.29□□□□□ -0.28
SMPD4-202ENST00000409031 TIRAPP58753 221 aa13.29□□□□□ -0.28
SMPD4-202ENST00000409031 LINC00526Q96FQ7 95 aa13.29□□□□□ -0.28
SMPD4-202ENST00000409031 SPG11Q96JI7 2443 aa13.28□□□□□ -0.28
SMPD4-202ENST00000409031 F5H768 121 aa13.28□□□□□ -0.28
SMPD4-202ENST00000409031 EML5Q05BV3 1969 aa13.28□□□□□ -0.28
SMPD4-202ENST00000409031 NDUFC2-KCTD14E9PQ53 114 aa13.28□□□□□ -0.28
SMPD4-202ENST00000409031 Q6ZQT7 251 aa13.28□□□□□ -0.28
SMPD4-202ENST00000409031 ATRXP46100 2492 aa13.27□□□□□ -0.28
SMPD4-202ENST00000409031 LY6DQ14210 128 aa13.27□□□□□ -0.28
SMPD4-202ENST00000409031 ODF3BA8MYP8 253 aa13.27□□□□□ -0.29
SMPD4-202ENST00000409031 K7ENP7 123 aa13.27□□□□□ -0.29
SMPD4-202ENST00000409031 J3QLI3 93 aa13.27□□□□□ -0.29
SMPD4-202ENST00000409031 PRB1P04280 392 aa13.26□□□□□ -0.29
SMPD4-202ENST00000409031 PKIGQ9Y2B9 76 aa13.26□□□□□ -0.29
SMPD4-202ENST00000409031 FAM222AQ5U5X8 452 aa13.25□□□□□ -0.29
SMPD4-202ENST00000409031 APRG1Q8IVJ8 170 aa13.25□□□□□ -0.29
SMPD4-202ENST00000409031 ENHOQ6UWT2 76 aa13.25□□□□□ -0.29
SMPD4-202ENST00000409031 C10orf105Q8TEF2 133 aa13.25□□□□□ -0.29
SMPD4-202ENST00000409031 C20orf173Q96LM9 149 aa13.25□□□□□ -0.29
SMPD4-202ENST00000409031 WISP2O76076 250 aa13.24□□□□□ -0.29
SMPD4-202ENST00000409031 MP68P56378 58 aa13.24□□□□□ -0.29
SMPD4-202ENST00000409031 IGIPA6NJ69 53 aa13.24□□□□□ -0.29
SMPD4-202ENST00000409031 C16orf74Q96GX8 76 aa13.24□□□□□ -0.29
SMPD4-202ENST00000409031 SIRPDQ9H106 197 aa13.24□□□□□ -0.29
SMPD4-202ENST00000409031 LY6LH3BQJ8 138 aa13.24□□□□□ -0.29
SMPD4-202ENST00000409031 V9GYY9 64 aa13.24□□□□□ -0.29
SMPD4-202ENST00000409031 NDUFC1O43677 76 aa13.24□□□□□ -0.29
SMPD4-202ENST00000409031 LINC00467Q9BRT7 94 aa13.24□□□□□ -0.29
SMPD4-202ENST00000409031 CRIP2P52943 208 aaPredicted RBP13.23□□□□□ -0.29
SMPD4-202ENST00000409031 COX8CQ7Z4L0 72 aa13.23□□□□□ -0.29
SMPD4-202ENST00000409031 PTPRQQ9UMZ3 2332 aa13.23□□□□□ -0.29
SMPD4-202ENST00000409031 A0A096LPF7 62 aa13.23□□□□□ -0.29
SMPD4-202ENST00000409031 IGHV4-59P01825 116 aa13.23□□□□□ -0.29
SMPD4-202ENST00000409031 RNASE3P12724 160 aaKnown RBP13.23□□□□□ -0.29
SMPD4-202ENST00000409031 EBI3Q14213 229 aa13.23□□□□□ -0.29
SMPD4-202ENST00000409031 MUC6Q6W4X9 2439 aa13.23□□□□□ -0.29
SMPD4-202ENST00000409031 ATP5EP56381 51 aaPredicted RBP13.23□□□□□ -0.29
SMPD4-202ENST00000409031 WFDC9Q8NEX5 89 aa13.23□□□□□ -0.29
SMPD4-202ENST00000409031 FSTL3O95633 263 aa13.22□□□□□ -0.29
SMPD4-202ENST00000409031 GRNP28799 593 aaKnown RBP13.22□□□□□ -0.29
SMPD4-202ENST00000409031 HIGD2BQ4VC39 106 aa13.22□□□□□ -0.29
SMPD4-202ENST00000409031 GNLYP22749 145 aa13.22□□□□□ -0.29
SMPD4-202ENST00000409031 ZFP36P26651 326 aaKnown RBP13.22□□□□□ -0.29
SMPD4-202ENST00000409031 VPREB3Q9UKI3 123 aa13.22□□□□□ -0.29
SMPD4-202ENST00000409031 TMEM89A2RUT3 159 aa13.22□□□□□ -0.29
SMPD4-202ENST00000409031 ARHGAP32A7KAX9 2087 aa13.21□□□□□ -0.29
SMPD4-202ENST00000409031 NCR3O14931 201 aa13.21□□□□□ -0.29
SMPD4-202ENST00000409031 Q6JHZ5 121 aa13.21□□□□□ -0.29
SMPD4-202ENST00000409031 ZFHX2Q9C0A1 2572 aaPredicted RBP13.21□□□□□ -0.29
SMPD4-202ENST00000409031 DEFB112Q30KQ8 113 aa13.21□□□□□ -0.29
SMPD4-202ENST00000409031 PIK3CD-AS1Q5SR53 167 aa13.21□□□□□ -0.29
SMPD4-202ENST00000409031 DIRC1Q969H9 104 aa13.21□□□□□ -0.3
SMPD4-202ENST00000409031 TSHBP01222 138 aa13.21□□□□□ -0.3
SMPD4-202ENST00000409031 IBA57-AS1B1ANH7 110 aa13.2□□□□□ -0.3
SMPD4-202ENST00000409031 A0A1W2PNU3 283 aaPredicted RBP13.2□□□□□ -0.3
SMPD4-202ENST00000409031 DEFB105AQ8NG35 78 aa13.19□□□□□ -0.3
SMPD4-202ENST00000409031 SLURP1P55000 103 aa13.19□□□□□ -0.3
SMPD4-202ENST00000409031 GYPEP15421 78 aa13.19□□□□□ -0.3
SMPD4-202ENST00000409031 PIP4P1Q86T03 277 aa13.19□□□□□ -0.3
SMPD4-202ENST00000409031 IGHV4-38-2P0DP08 117 aa13.19□□□□□ -0.3
SMPD4-202ENST00000409031 DEFB136Q30KP8 78 aa13.18□□□□□ -0.3
SMPD4-202ENST00000409031 AGRNO00468 2067 aa13.18□□□□□ -0.3
SMPD4-202ENST00000409031 LINC01548A6NM66 108 aa13.18□□□□□ -0.3
SMPD4-202ENST00000409031 FAM19A5Q7Z5A7 132 aaPredicted RBP13.18□□□□□ -0.3
SMPD4-202ENST00000409031 MPLKIPQ8TAP9 179 aa13.18□□□□□ -0.3
SMPD4-202ENST00000409031 A0A0U1RQV1 116 aa13.17□□□□□ -0.3
SMPD4-202ENST00000409031 MRPS36P82909 103 aaKnown RBP13.17□□□□□ -0.3
SMPD4-202ENST00000409031 PRR9Q5T870 116 aa13.17□□□□□ -0.3
SMPD4-202ENST00000409031 SLPIP03973 132 aa13.17□□□□□ -0.3
SMPD4-202ENST00000409031 PSMG3-AS1Q96PY0 264 aa13.17□□□□□ -0.3
SMPD4-202ENST00000409031 IGLV2-18A0A075B6J9 118 aa13.17□□□□□ -0.3
SMPD4-202ENST00000409031 A8MZ25 164 aa13.17□□□□□ -0.3
SMPD4-202ENST00000409031 HRCT1Q6UXD1 115 aa13.17□□□□□ -0.3
SMPD4-202ENST00000409031 IGLV10-54A0A075B6I4 117 aa13.16□□□□□ -0.3
SMPD4-202ENST00000409031 RNF223E7ERA6 249 aa13.16□□□□□ -0.3
SMPD4-202ENST00000409031 IGLV4-69A0A075B6H9 119 aa13.16□□□□□ -0.3
SMPD4-202ENST00000409031 K7EQG2 157 aa13.16□□□□□ -0.3
SMPD4-202ENST00000409031 SHISA2Q6UWI4 295 aa13.16□□□□□ -0.3
SMPD4-202ENST00000409031 MUC22E2RYF6 1773 aaPredicted RBP13.15□□□□□ -0.3
SMPD4-202ENST00000409031 SMIM26A0A096LP01 95 aa13.15□□□□□ -0.3
SMPD4-202ENST00000409031 IGHV4-28A0A0C4DH34 117 aa13.15□□□□□ -0.3
SMPD4-202ENST00000409031 IGHV4-61A0A0C4DH41 118 aa13.15□□□□□ -0.3
SMPD4-202ENST00000409031 IGF2-ASQ6U949 168 aa13.15□□□□□ -0.3
SMPD4-202ENST00000409031 LTBP2Q14767 1821 aa13.15□□□□□ -0.3
SMPD4-202ENST00000409031 CSPG4Q6UVK1 2322 aa13.14□□□□□ -0.31
SMPD4-202ENST00000409031 BPY2O14599 106 aa13.14□□□□□ -0.31
SMPD4-202ENST00000409031 CAMK2N2Q96S95 79 aa13.14□□□□□ -0.31
SMPD4-202ENST00000409031 C10orf142B7Z368 130 aa13.14□□□□□ -0.31
SMPD4-202ENST00000409031 PRO0461Q9UI25 63 aa13.13□□□□□ -0.31
SMPD4-202ENST00000409031 POM121L12Q8N7R1 296 aa13.13□□□□□ -0.31
SMPD4-202ENST00000409031 KLLNB2CW77 178 aa13.13□□□□□ -0.31
SMPD4-202ENST00000409031 SORL1Q92673 2214 aa13.12□□□□□ -0.31
SMPD4-202ENST00000409031 ETDCA0A1B0GVM5 59 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms