RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 DIRC1Q969H9 104 aa10.91□□□□□ -0.66
UFD1-202ENST00000399523 LINC00526Q96FQ7 95 aa10.91□□□□□ -0.66
UFD1-202ENST00000399523 MLST8Q9BVC4 326 aa10.91□□□□□ -0.66
UFD1-202ENST00000399523 COTL1Q14019 142 aa10.9□□□□□ -0.66
UFD1-202ENST00000399523 C1orf137Q5JT78 98 aa10.9□□□□□ -0.66
UFD1-202ENST00000399523 MARVELD1Q9BSK0 173 aa10.9□□□□□ -0.66
UFD1-202ENST00000399523 NIT2Q9NQR4 276 aa10.9□□□□□ -0.66
UFD1-202ENST00000399523 IGLV1-50A0A075B6I6 118 aa10.89□□□□□ -0.67
UFD1-202ENST00000399523 IGHV1-58A0A0C4DH39 117 aa10.89□□□□□ -0.67
UFD1-202ENST00000399523 SYCNQ0VAF6 134 aa10.88□□□□□ -0.67
UFD1-202ENST00000399523 S100A9P06702 114 aaKnown RBP10.87□□□□□ -0.67
UFD1-202ENST00000399523 GAGE2BQ13066 116 aa10.87□□□□□ -0.67
UFD1-202ENST00000399523 CST9LP1Q5W188 147 aa10.87□□□□□ -0.67
UFD1-202ENST00000399523 STOML3Q8TAV4 291 aa10.87□□□□□ -0.67
UFD1-202ENST00000399523 LOC107984640A0A0U1RRK4 108 aa10.86□□□□□ -0.67
UFD1-202ENST00000399523 H0Y9J4 135 aa10.86□□□□□ -0.67
UFD1-202ENST00000399523 IGLV7-43P04211 117 aa10.86□□□□□ -0.67
UFD1-202ENST00000399523 AMMECR1LQ6DCA0 310 aa10.86□□□□□ -0.67
UFD1-202ENST00000399523 BAGE2Q86Y30 109 aa10.86□□□□□ -0.67
UFD1-202ENST00000399523 XCL1P47992 114 aa10.85□□□□□ -0.67
UFD1-202ENST00000399523 C9orf116Q5BN46 136 aaPredicted RBP10.85□□□□□ -0.67
UFD1-202ENST00000399523 MAP1LC3B2A6NCE7 125 aa10.84□□□□□ -0.67
UFD1-202ENST00000399523 KRTAP1-4P0C5Y4 121 aa10.84□□□□□ -0.67
UFD1-202ENST00000399523 IGLC6P0CF74 106 aa10.84□□□□□ -0.67
UFD1-202ENST00000399523 RPL7L1Q6DKI1 246 aaKnown RBP10.84□□□□□ -0.67
UFD1-202ENST00000399523 MAP1LC3BQ9GZQ8 125 aa10.84□□□□□ -0.67
UFD1-202ENST00000399523 H7C423 109 aa10.83□□□□□ -0.68
UFD1-202ENST00000399523 ZNF561-AS1K7EIQ3 104 aa10.83□□□□□ -0.68
UFD1-202ENST00000399523 NTF3P20783 257 aa10.83□□□□□ -0.68
UFD1-202ENST00000399523 RNASEKQ6P5S7 137 aaKnown RBP10.83□□□□□ -0.68
UFD1-202ENST00000399523 PHF5AQ7RTV0 110 aaKnown RBP10.83□□□□□ -0.68
UFD1-202ENST00000399523 OR5A1Q8NGJ0 315 aa10.83□□□□□ -0.68
UFD1-202ENST00000399523 CCL25O15444 150 aa10.82□□□□□ -0.68
UFD1-202ENST00000399523 UPK1BO75841 260 aa10.82□□□□□ -0.68
UFD1-202ENST00000399523 FGF6P10767 208 aa10.82□□□□□ -0.68
UFD1-202ENST00000399523 CAMPP49913 170 aa10.82□□□□□ -0.68
UFD1-202ENST00000399523 AKR1C8PQ5T2L2 129 aa10.82□□□□□ -0.68
UFD1-202ENST00000399523 LINC00299Q6ZSB3 139 aa10.82□□□□□ -0.68
UFD1-202ENST00000399523 LINC00959A0A1B0GUT2 108 aa10.81□□□□□ -0.68
UFD1-202ENST00000399523 IFITM3Q01628 133 aa10.81□□□□□ -0.68
UFD1-202ENST00000399523 Q6ZNX1 250 aa10.81□□□□□ -0.68
UFD1-202ENST00000399523 ISOC2Q96AB3 205 aa10.81□□□□□ -0.68
UFD1-202ENST00000399523 TPPP3Q9BW30 176 aa10.81□□□□□ -0.68
UFD1-202ENST00000399523 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.8□□□□□ -0.68
UFD1-202ENST00000399523 BORCS7-ASMTA0A0B4J1R7 106 aa10.8□□□□□ -0.68
UFD1-202ENST00000399523 IGKV2-29A2NJV5 120 aaPredicted RBP10.8□□□□□ -0.68
UFD1-202ENST00000399523 PAGE4O60829 102 aa10.8□□□□□ -0.68
UFD1-202ENST00000399523 NCR2O95944 276 aa10.8□□□□□ -0.68
UFD1-202ENST00000399523 BCL2P10415 239 aa10.8□□□□□ -0.68
UFD1-202ENST00000399523 S100ZQ8WXG8 99 aa10.8□□□□□ -0.68
UFD1-202ENST00000399523 TRAV1-1A0A0B4J248 108 aa10.79□□□□□ -0.68
UFD1-202ENST00000399523 SCO2A0A1W2PP80 73 aa10.79□□□□□ -0.68
UFD1-202ENST00000399523 TRGC1P0CF51 173 aa10.79□□□□□ -0.68
UFD1-202ENST00000399523 ZNF25P17030 456 aaPredicted RBP10.79□□□□□ -0.68
UFD1-202ENST00000399523 RPL13AP40429 203 aaKnown RBP10.79□□□□□ -0.68
UFD1-202ENST00000399523 NUP35Q8NFH5 326 aa10.79□□□□□ -0.68
UFD1-202ENST00000399523 IGLV4-69A0A075B6H9 119 aa10.78□□□□□ -0.68
UFD1-202ENST00000399523 APOMO95445 188 aa10.78□□□□□ -0.68
UFD1-202ENST00000399523 CD164L2Q6UWJ8 174 aa10.78□□□□□ -0.68
UFD1-202ENST00000399523 F2Z2F3 143 aa10.77□□□□□ -0.69
UFD1-202ENST00000399523 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.77□□□□□ -0.69
UFD1-202ENST00000399523 UBE2D1P51668 147 aa10.77□□□□□ -0.69
UFD1-202ENST00000399523 RPS20P60866 119 aaKnown RBP10.77□□□□□ -0.69
UFD1-202ENST00000399523 EIF5AP63241 154 aaKnown RBP10.77□□□□□ -0.69
UFD1-202ENST00000399523 MEF2BQ02080 365 aaPredicted RBP10.77□□□□□ -0.69
UFD1-202ENST00000399523 TMUB2Q71RG4 321 aa10.76□□□□□ -0.69
UFD1-202ENST00000399523 KRTAP11-1Q8IUC1 163 aa10.76□□□□□ -0.69
UFD1-202ENST00000399523 GATD1Q8NB37 220 aa10.76□□□□□ -0.69
UFD1-202ENST00000399523 A0A087WZ39 114 aa10.75□□□□□ -0.69
UFD1-202ENST00000399523 APCSP02743 223 aa10.75□□□□□ -0.69
UFD1-202ENST00000399523 SS18Q15532 418 aa10.75□□□□□ -0.69
UFD1-202ENST00000399523 Q5BKY6 102 aa10.75□□□□□ -0.69
UFD1-202ENST00000399523 OR2D3Q8NGH3 330 aa10.75□□□□□ -0.69
UFD1-202ENST00000399523 BTF3L4Q96K17 158 aa10.74□□□□□ -0.69
UFD1-202ENST00000399523 FSIP2Q5CZC0 6907 aa10.74□□□□□ -0.69
UFD1-202ENST00000399523 RPL18AQ02543 176 aaKnown RBP10.73□□□□□ -0.69
UFD1-202ENST00000399523 LYZL1Q6UWQ5 148 aa10.73□□□□□ -0.69
UFD1-202ENST00000399523 TSKUQ8WUA8 353 aa10.73□□□□□ -0.69
UFD1-202ENST00000399523 TMEM101Q96IK0 257 aa10.73□□□□□ -0.69
UFD1-202ENST00000399523 CAMK2N2Q96S95 79 aa10.73□□□□□ -0.69
UFD1-202ENST00000399523 NDUFA13Q9P0J0 144 aa10.73□□□□□ -0.69
UFD1-202ENST00000399523 CARHSP1Q9Y2V2 147 aaKnown RBP10.73□□□□□ -0.69
UFD1-202ENST00000399523 C19orf71A6NCJ1 209 aa10.72□□□□□ -0.69
UFD1-202ENST00000399523 RPL35P42766 123 aaKnown RBP10.72□□□□□ -0.69
UFD1-202ENST00000399523 LCE2DQ5TA82 110 aaPredicted RBP10.72□□□□□ -0.69
UFD1-202ENST00000399523 EIF5AL1Q6IS14 154 aaKnown RBP10.72□□□□□ -0.69
UFD1-202ENST00000399523 C2orf48Q96LS8 159 aa10.72□□□□□ -0.69
UFD1-202ENST00000399523 PFDN1O60925 122 aa10.71□□□□□ -0.69
UFD1-202ENST00000399523 RPL39LQ96EH5 51 aaKnown RBP10.71□□□□□ -0.69
UFD1-202ENST00000399523 CRCT1Q9UGL9 99 aa10.71□□□□□ -0.69
UFD1-202ENST00000399523 MUC17Q685J3 4493 aa10.71□□□□□ -0.7
UFD1-202ENST00000399523 XKRY2A2RUG3 117 aa10.7□□□□□ -0.7
UFD1-202ENST00000399523 BCL2L11O43521 198 aa10.7□□□□□ -0.7
UFD1-202ENST00000399523 TSPAN13O95857 204 aa10.7□□□□□ -0.7
UFD1-202ENST00000399523 MALP21145 153 aa10.7□□□□□ -0.7
UFD1-202ENST00000399523 RNF151Q2KHN1 245 aa10.7□□□□□ -0.7
UFD1-202ENST00000399523 C9orf62Q8N4C0 152 aa10.7□□□□□ -0.7
UFD1-202ENST00000399523 CDC42SE2Q9NRR3 84 aa10.7□□□□□ -0.7
UFD1-202ENST00000399523 SDHAF1A6NFY7 115 aa10.69□□□□□ -0.7
UFD1-202ENST00000399523 COX7A2LO14548 114 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 306.2 ms