RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 RHOHQ15669 191 aa17.73■□□□□ 0.43
CSNK1E-203ENST00000396832 SPINK13Q1W4C9 94 aa17.73■□□□□ 0.43
CSNK1E-203ENST00000396832 RNASE13Q5GAN3 156 aaKnown RBP17.73■□□□□ 0.43
CSNK1E-203ENST00000396832 IGSF10Q6WRI0 2623 aa17.73■□□□□ 0.43
CSNK1E-203ENST00000396832 M0QY20 66 aa17.73■□□□□ 0.43
CSNK1E-203ENST00000396832 LITAFQ99732 161 aa17.73■□□□□ 0.43
CSNK1E-203ENST00000396832 MYO18BQ8IUG5 2567 aa17.72■□□□□ 0.43
CSNK1E-203ENST00000396832 C20orf203Q8NBC4 194 aa17.72■□□□□ 0.43
CSNK1E-203ENST00000396832 DUX5Q96PT3 197 aa17.72■□□□□ 0.43
CSNK1E-203ENST00000396832 CLEC2BQ92478 149 aa17.71■□□□□ 0.43
CSNK1E-203ENST00000396832 CHCHD5Q9BSY4 110 aa17.71■□□□□ 0.43
CSNK1E-203ENST00000396832 IGLV4-3A0A075B6K6 122 aa17.71■□□□□ 0.43
CSNK1E-203ENST00000396832 MRPL23Q16540 153 aaKnown RBP17.71■□□□□ 0.43
CSNK1E-203ENST00000396832 Q6ZSV7 163 aa17.71■□□□□ 0.43
CSNK1E-203ENST00000396832 SPANXA1Q9NS26 97 aa17.71■□□□□ 0.43
CSNK1E-203ENST00000396832 H3BT86 120 aa17.7■□□□□ 0.42
CSNK1E-203ENST00000396832 COX6CP09669 75 aa17.7■□□□□ 0.42
CSNK1E-203ENST00000396832 ADAMTSL4-AS1Q5T5F5 129 aa17.7■□□□□ 0.42
CSNK1E-203ENST00000396832 PRM2P04554 102 aa17.7■□□□□ 0.42
CSNK1E-203ENST00000396832 TIMM21Q9BVV7 248 aa17.69■□□□□ 0.42
CSNK1E-203ENST00000396832 DCANP1Q8TF63 244 aa17.69■□□□□ 0.42
CSNK1E-203ENST00000396832 IGHG2P01859 326 aa17.68■□□□□ 0.42
CSNK1E-203ENST00000396832 UCNP55089 124 aa17.68■□□□□ 0.42
CSNK1E-203ENST00000396832 CEMP1Q6PRD7 247 aaPredicted RBP17.68■□□□□ 0.42
CSNK1E-203ENST00000396832 TRAV8-3A0A0A6YYJ7 113 aa17.68■□□□□ 0.42
CSNK1E-203ENST00000396832 NPC2P61916 151 aa17.68■□□□□ 0.42
CSNK1E-203ENST00000396832 USMG5Q96IX5 58 aa17.68■□□□□ 0.42
CSNK1E-203ENST00000396832 PRRC2AP48634 2157 aaKnown RBP17.68■□□□□ 0.42
CSNK1E-203ENST00000396832 IGHV3-16A0A0C4DH30 117 aa17.65■□□□□ 0.42
CSNK1E-203ENST00000396832 FAM240AA0A1B0GVK7 77 aa17.65■□□□□ 0.42
CSNK1E-203ENST00000396832 I3L3M4 83 aa17.65■□□□□ 0.42
CSNK1E-203ENST00000396832 C3orf56Q8N813 242 aa17.65■□□□□ 0.42
CSNK1E-203ENST00000396832 EPG5Q9HCE0 2579 aa17.64■□□□□ 0.42
CSNK1E-203ENST00000396832 ID1P41134 155 aa17.64■□□□□ 0.41
CSNK1E-203ENST00000396832 PROK1P58294 105 aa17.64■□□□□ 0.41
CSNK1E-203ENST00000396832 C9orf85Q96MD7 179 aa17.64■□□□□ 0.41
CSNK1E-203ENST00000396832 LST1O00453 97 aa17.64■□□□□ 0.41
CSNK1E-203ENST00000396832 NDUFA12Q9UI09 145 aa17.64■□□□□ 0.41
CSNK1E-203ENST00000396832 DEFB121Q5J5C9 76 aa17.63■□□□□ 0.41
CSNK1E-203ENST00000396832 SPANXDQ9BXN6 97 aa17.63■□□□□ 0.41
CSNK1E-203ENST00000396832 SPANXCQ9NY87 97 aa17.63■□□□□ 0.41
CSNK1E-203ENST00000396832 MYO9AB2RTY4 2548 aa17.63■□□□□ 0.41
CSNK1E-203ENST00000396832 TRGV11A0A075B6L2 103 aa17.63■□□□□ 0.41
CSNK1E-203ENST00000396832 USP9XQ93008 2570 aaPredicted RBP17.62■□□□□ 0.41
CSNK1E-203ENST00000396832 KNCNA6PVL3 124 aa17.62■□□□□ 0.41
CSNK1E-203ENST00000396832 A8MZ25 164 aa17.62■□□□□ 0.41
CSNK1E-203ENST00000396832 AVPP01185 164 aa17.62■□□□□ 0.41
CSNK1E-203ENST00000396832 MXRA5Q9NR99 2828 aa17.62■□□□□ 0.41
CSNK1E-203ENST00000396832 A6NDX4 124 aa17.62■□□□□ 0.41
CSNK1E-203ENST00000396832 MIAQ16674 131 aa17.62■□□□□ 0.41
CSNK1E-203ENST00000396832 Q9UF83 564 aa17.62■□□□□ 0.41
CSNK1E-203ENST00000396832 C2CD3Q4AC94 2353 aa17.61■□□□□ 0.41
CSNK1E-203ENST00000396832 TRBV7-7A0A0K0K1E9 115 aa17.61■□□□□ 0.41
CSNK1E-203ENST00000396832 CD28P10747 220 aa17.61■□□□□ 0.41
CSNK1E-203ENST00000396832 IGHV1-58A0A0C4DH39 117 aa17.61■□□□□ 0.41
CSNK1E-203ENST00000396832 FAM208BQ5VWN6 2430 aa17.61■□□□□ 0.41
CSNK1E-203ENST00000396832 IGHV4-30-2A0A087WSY4 118 aa17.6■□□□□ 0.41
CSNK1E-203ENST00000396832 MRPS36P82909 103 aaKnown RBP17.6■□□□□ 0.41
CSNK1E-203ENST00000396832 GNLYP22749 145 aa17.59■□□□□ 0.41
CSNK1E-203ENST00000396832 SYNJ2BPP57105 145 aa17.59■□□□□ 0.41
CSNK1E-203ENST00000396832 TMEM61Q8N0U2 210 aa17.59■□□□□ 0.41
CSNK1E-203ENST00000396832 FAM104AQ969W3 186 aa17.59■□□□□ 0.41
CSNK1E-203ENST00000396832 PIMREGQ9BSJ6 248 aa17.59■□□□□ 0.41
CSNK1E-203ENST00000396832 IGLV1-40P01703 118 aa17.58■□□□□ 0.41
CSNK1E-203ENST00000396832 LINC01587Q99440 93 aa17.58■□□□□ 0.41
CSNK1E-203ENST00000396832 IGHV1OR15-1A0A075B7D0 117 aa17.57■□□□□ 0.4
CSNK1E-203ENST00000396832 TMEM101Q96IK0 257 aa17.57■□□□□ 0.4
CSNK1E-203ENST00000396832 WNK1Q9H4A3 2382 aa17.57■□□□□ 0.4
CSNK1E-203ENST00000396832 TMEM126AQ9H061 195 aa17.57■□□□□ 0.4
CSNK1E-203ENST00000396832 IGHV4-59P01825 116 aa17.56■□□□□ 0.4
CSNK1E-203ENST00000396832 HIST2H2BDQ6DRA6 164 aa17.56■□□□□ 0.4
CSNK1E-203ENST00000396832 NRGNQ92686 78 aa17.56■□□□□ 0.4
CSNK1E-203ENST00000396832 TLN2Q9Y4G6 2542 aa17.56■□□□□ 0.4
CSNK1E-203ENST00000396832 BRI3O95415 125 aa17.56■□□□□ 0.4
CSNK1E-203ENST00000396832 VSIG2Q96IQ7 327 aa17.56■□□□□ 0.4
CSNK1E-203ENST00000396832 CCL19Q99731 98 aa17.56■□□□□ 0.4
CSNK1E-203ENST00000396832 USP24Q9UPU5 2620 aa17.55■□□□□ 0.4
CSNK1E-203ENST00000396832 SNRPD3P62318 126 aaKnown RBP17.55■□□□□ 0.4
CSNK1E-203ENST00000396832 PYGO1Q9Y3Y4 419 aa17.55■□□□□ 0.4
CSNK1E-203ENST00000396832 FAM236AA0A1B0GUQ0 79 aa17.55■□□□□ 0.4
CSNK1E-203ENST00000396832 FAM236BA0A1B0GV22 79 aa17.55■□□□□ 0.4
CSNK1E-203ENST00000396832 ATP5J2P56134 94 aa17.55■□□□□ 0.4
CSNK1E-203ENST00000396832 MAPK1IP1LQ8NDC0 245 aa17.55■□□□□ 0.4
CSNK1E-203ENST00000396832 TNFRSF18Q9Y5U5 241 aa17.55■□□□□ 0.4
CSNK1E-203ENST00000396832 H3BUA1 57 aa17.54■□□□□ 0.4
CSNK1E-203ENST00000396832 DAND5Q8N907 189 aa17.54■□□□□ 0.4
CSNK1E-203ENST00000396832 RBMY1A1P0DJD3 496 aaKnown RBP17.53■□□□□ 0.4
CSNK1E-203ENST00000396832 RBMY1CP0DJD4 496 aa17.53■□□□□ 0.4
CSNK1E-203ENST00000396832 RBMY1FQ15415 496 aaKnown RBP17.53■□□□□ 0.4
CSNK1E-203ENST00000396832 ZNF462Q96JM2 2506 aa17.53■□□□□ 0.4
CSNK1E-203ENST00000396832 YAE1D1Q9NRH1 226 aa17.53■□□□□ 0.4
CSNK1E-203ENST00000396832 LRRK2Q5S007 2527 aa17.53■□□□□ 0.4
CSNK1E-203ENST00000396832 ANKRD17O75179 2603 aaKnown RBP17.52■□□□□ 0.4
CSNK1E-203ENST00000396832 IGHV3-38A0A0C4DH36 116 aa17.51■□□□□ 0.39
CSNK1E-203ENST00000396832 SETD2Q9BYW2 2564 aaPredicted RBP17.51■□□□□ 0.39
CSNK1E-203ENST00000396832 C10orf105Q8TEF2 133 aa17.5■□□□□ 0.39
CSNK1E-203ENST00000396832 MSMBP08118 114 aa17.5■□□□□ 0.39
CSNK1E-203ENST00000396832 FBN2P35556 2912 aa17.5■□□□□ 0.39
CSNK1E-203ENST00000396832 CFHR3Q02985 330 aa17.5■□□□□ 0.39
CSNK1E-203ENST00000396832 VPREB3Q9UKI3 123 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms