RNA–Protein interactions for RNA: ENST00000393693.6

SNCB-202, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-202ENST00000393693 TRAV4A0A0B4J268 109 aa12.83□□□□□ -0.36
SNCB-202ENST00000393693 GAGE12BA1L429 117 aa12.83□□□□□ -0.36
SNCB-202ENST00000393693 GAGE7O76087 117 aa12.83□□□□□ -0.36
SNCB-202ENST00000393693 GAGE12FP0CL80 117 aa12.83□□□□□ -0.36
SNCB-202ENST00000393693 GAGE12GP0CL81 117 aa12.83□□□□□ -0.36
SNCB-202ENST00000393693 GAGE12IP0CL82 117 aa12.83□□□□□ -0.36
SNCB-202ENST00000393693 GATA1P15976 413 aaPredicted RBP12.83□□□□□ -0.36
SNCB-202ENST00000393693 Q6ZTI0 123 aa12.83□□□□□ -0.36
SNCB-202ENST00000393693 LINC00612Q8N6U2 182 aa12.83□□□□□ -0.36
SNCB-202ENST00000393693 PACRGQ96M98 296 aaPredicted RBP12.83□□□□□ -0.36
SNCB-202ENST00000393693 AP5S1Q9NUS5 200 aa12.83□□□□□ -0.36
SNCB-202ENST00000393693 NUPR1O60356 82 aa12.82□□□□□ -0.36
SNCB-202ENST00000393693 FABP4P15090 132 aa12.82□□□□□ -0.36
SNCB-202ENST00000393693 IFI27P40305 119 aaPredicted RBP12.82□□□□□ -0.36
SNCB-202ENST00000393693 AKR1D1P51857 326 aa12.82□□□□□ -0.36
SNCB-202ENST00000393693 LINC00310P59036 64 aa12.82□□□□□ -0.36
SNCB-202ENST00000393693 ST20Q9HBF5 79 aa12.82□□□□□ -0.36
SNCB-202ENST00000393693 HERC1Q15751 4861 aa12.81□□□□□ -0.36
SNCB-202ENST00000393693 TRGV2A0A075B6R0 118 aa12.81□□□□□ -0.36
SNCB-202ENST00000393693 GAS8-AS1O95177 125 aa12.81□□□□□ -0.36
SNCB-202ENST00000393693 AMTP48728 403 aa12.81□□□□□ -0.36
SNCB-202ENST00000393693 SUMO2P61956 95 aaKnown RBP12.81□□□□□ -0.36
SNCB-202ENST00000393693 TTC32Q5I0X7 151 aa12.81□□□□□ -0.36
SNCB-202ENST00000393693 UFSP1Q6NVU6 142 aa12.81□□□□□ -0.36
SNCB-202ENST00000393693 Q8N8P6 123 aa12.81□□□□□ -0.36
SNCB-202ENST00000393693 HIST1H2BLQ99880 126 aa12.81□□□□□ -0.36
SNCB-202ENST00000393693 TRBV6-5A0A0K0K1A5 114 aa12.8□□□□□ -0.36
SNCB-202ENST00000393693 M0QY20 66 aa12.8□□□□□ -0.36
SNCB-202ENST00000393693 RPL32P62910 135 aaKnown RBP12.8□□□□□ -0.36
SNCB-202ENST00000393693 RPL39LQ96EH5 51 aaKnown RBP12.8□□□□□ -0.36
SNCB-202ENST00000393693 UPK3BQ9BT76 320 aa12.8□□□□□ -0.36
SNCB-202ENST00000393693 NIT2Q9NQR4 276 aa12.8□□□□□ -0.36
SNCB-202ENST00000393693 IGHV3-73A0A0B4J1V6 119 aa12.79□□□□□ -0.36
SNCB-202ENST00000393693 URB1-AS1Q96HZ7 61 aa12.79□□□□□ -0.36
SNCB-202ENST00000393693 SMIM2Q9BVW6 85 aa12.79□□□□□ -0.36
SNCB-202ENST00000393693 K7EMI3 77 aa12.78□□□□□ -0.36
SNCB-202ENST00000393693 IGHV3-53P01767 116 aa12.78□□□□□ -0.36
SNCB-202ENST00000393693 BTF3P20290 206 aaKnown RBP12.78□□□□□ -0.36
SNCB-202ENST00000393693 DNAJC30Q96LL9 226 aa12.78□□□□□ -0.36
SNCB-202ENST00000393693 MRPS16Q9Y3D3 137 aaKnown RBP12.78□□□□□ -0.36
SNCB-202ENST00000393693 LINC01546A6NGU7 62 aa12.77□□□□□ -0.37
SNCB-202ENST00000393693 IFITM10A6NMD0 228 aa12.77□□□□□ -0.37
SNCB-202ENST00000393693 VCYO14598 125 aa12.77□□□□□ -0.37
SNCB-202ENST00000393693 OR10D4PQ8NGN7 298 aa12.77□□□□□ -0.37
SNCB-202ENST00000393693 C18orf15Q96N68 181 aa12.77□□□□□ -0.37
SNCB-202ENST00000393693 FUSP35637 526 aaKnown RBP eCLIP12.76□□□□□ -0.37
SNCB-202ENST00000393693 FAM19A2Q8N3H0 131 aa12.76□□□□□ -0.37
SNCB-202ENST00000393693 VSIG2Q96IQ7 327 aa12.76□□□□□ -0.37
SNCB-202ENST00000393693 ZNF479Q96JC4 524 aa12.76□□□□□ -0.37
SNCB-202ENST00000393693 TNFRSF18Q9Y5U5 241 aa12.76□□□□□ -0.37
SNCB-202ENST00000393693 TCAPO15273 167 aa12.75□□□□□ -0.37
SNCB-202ENST00000393693 A0A096LPF7 62 aa12.74□□□□□ -0.37
SNCB-202ENST00000393693 TRGV4A0A0C4DH28 118 aa12.74□□□□□ -0.37
SNCB-202ENST00000393693 IGHV1-24A0A0C4DH33 117 aa12.74□□□□□ -0.37
SNCB-202ENST00000393693 SDHAF1A6NFY7 115 aa12.74□□□□□ -0.37
SNCB-202ENST00000393693 H3BNG1 76 aa12.74□□□□□ -0.37
SNCB-202ENST00000393693 G0S2P27469 103 aa12.74□□□□□ -0.37
SNCB-202ENST00000393693 POLR2KP53803 58 aaKnown RBP12.74□□□□□ -0.37
SNCB-202ENST00000393693 LAGE3Q14657 143 aa12.74□□□□□ -0.37
SNCB-202ENST00000393693 ORMDL2Q53FV1 153 aa12.74□□□□□ -0.37
SNCB-202ENST00000393693 KIR2DL4Q99706 377 aa12.74□□□□□ -0.37
SNCB-202ENST00000393693 TMEM70Q9BUB7 260 aa12.74□□□□□ -0.37
SNCB-202ENST00000393693 TRBV10-1A0A0K0K1A3 114 aa12.73□□□□□ -0.37
SNCB-202ENST00000393693 HBDP02042 147 aa12.73□□□□□ -0.37
SNCB-202ENST00000393693 Q6ZRN7 208 aaPredicted RBP12.73□□□□□ -0.37
SNCB-202ENST00000393693 HSPB8Q9UJY1 196 aa12.73□□□□□ -0.37
SNCB-202ENST00000393693 K7EQD1 137 aa12.72□□□□□ -0.37
SNCB-202ENST00000393693 LEPROTL1O95214 131 aa12.72□□□□□ -0.37
SNCB-202ENST00000393693 FCER1GP30273 86 aa12.72□□□□□ -0.37
SNCB-202ENST00000393693 FAT1Q14517 4588 aa12.71□□□□□ -0.37
SNCB-202ENST00000393693 TRBV27A0A0K0K1C4 114 aa12.71□□□□□ -0.37
SNCB-202ENST00000393693 TRBV6-4A0A1B0GX49 114 aa12.71□□□□□ -0.37
SNCB-202ENST00000393693 PMCHL1Q16048 86 aa12.71□□□□□ -0.37
SNCB-202ENST00000393693 Q6ZSN1 163 aa12.71□□□□□ -0.37
SNCB-202ENST00000393693 LINC01549A6NIU2 74 aa12.7□□□□□ -0.38
SNCB-202ENST00000393693 EPM2AB3EWF7 344 aa12.7□□□□□ -0.38
SNCB-202ENST00000393693 I3L3M4 83 aa12.7□□□□□ -0.38
SNCB-202ENST00000393693 RPL36AP83881 106 aaKnown RBP12.7□□□□□ -0.38
SNCB-202ENST00000393693 NEXN-AS1Q8NBZ9 246 aa12.7□□□□□ -0.38
SNCB-202ENST00000393693 RPL36ALQ969Q0 106 aaKnown RBP12.7□□□□□ -0.38
SNCB-202ENST00000393693 PRADC1Q9BSG0 188 aa12.7□□□□□ -0.38
SNCB-202ENST00000393693 RHOHQ15669 191 aa12.69□□□□□ -0.38
SNCB-202ENST00000393693 SIVA1O15304 175 aa12.68□□□□□ -0.38
SNCB-202ENST00000393693 FHL2Q14192 279 aa12.68□□□□□ -0.38
SNCB-202ENST00000393693 SLC25A29Q8N8R3 303 aa12.68□□□□□ -0.38
SNCB-202ENST00000393693 SMIM6P0DI80 62 aa12.67□□□□□ -0.38
SNCB-202ENST00000393693 KRTDAPP60985 99 aa12.67□□□□□ -0.38
SNCB-202ENST00000393693 MAP1LC3CQ9BXW4 147 aa12.67□□□□□ -0.38
SNCB-202ENST00000393693 TRBV7-3A0A075B6L6 115 aa12.66□□□□□ -0.38
SNCB-202ENST00000393693 XGP55808 180 aa12.66□□□□□ -0.38
SNCB-202ENST00000393693 PGPEP1Q9NXJ5 209 aa12.66□□□□□ -0.38
SNCB-202ENST00000393693 HHLA3Q9XRX5 114 aa12.66□□□□□ -0.38
SNCB-202ENST00000393693 A0A096LNJ9 63 aa12.65□□□□□ -0.38
SNCB-202ENST00000393693 INAFM2P0DMQ5 153 aa12.65□□□□□ -0.38
SNCB-202ENST00000393693 JOSD1Q15040 202 aaPredicted RBP12.65□□□□□ -0.38
SNCB-202ENST00000393693 NEGR1Q7Z3B1 354 aa12.65□□□□□ -0.38
SNCB-202ENST00000393693 PRO0255Q9UI72 69 aa12.65□□□□□ -0.38
SNCB-202ENST00000393693 PAX4O43316 350 aa12.64□□□□□ -0.39
SNCB-202ENST00000393693 ATP5LO75964 103 aa12.64□□□□□ -0.39
SNCB-202ENST00000393693 DAZ4Q86SG3 579 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms