RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 LAMA5O15230 3695 aa-1.02□□□□□ -2.57
RNU6-541P-201ENST00000384709 CREBBPQ92793 2442 aa-1.02□□□□□ -2.57
RNU6-541P-201ENST00000384709 SAR1AQ9NR31 198 aa-1.02□□□□□ -2.57
RNU6-541P-201ENST00000384709 PCNX1Q96RV3 2341 aa-1.03□□□□□ -2.57
RNU6-541P-201ENST00000384709 TMEM2Q9UHN6 1383 aa-1.03□□□□□ -2.57
RNU6-541P-201ENST00000384709 SETD2Q9BYW2 2564 aaPredicted RBP-1.03□□□□□ -2.57
RNU6-541P-201ENST00000384709 TSTD3H0UI37 97 aa-1.03□□□□□ -2.57
RNU6-541P-201ENST00000384709 APOC4-APOC2K7ER74 178 aa-1.03□□□□□ -2.57
RNU6-541P-201ENST00000384709 ZNF818PQ6ZRF7 136 aa-1.03□□□□□ -2.57
RNU6-541P-201ENST00000384709 RPRMQ9NS64 109 aa-1.03□□□□□ -2.57
RNU6-541P-201ENST00000384709 OVOS2A0A0J9YW53 1432 aa-1.04□□□□□ -2.58
RNU6-541P-201ENST00000384709 OVOS2Q6IE36 1432 aa-1.04□□□□□ -2.58
RNU6-541P-201ENST00000384709 BCE1O60756 84 aa-1.04□□□□□ -2.58
RNU6-541P-201ENST00000384709 PITX3O75364 302 aa-1.04□□□□□ -2.58
RNU6-541P-201ENST00000384709 IFNA17P01571 189 aa-1.04□□□□□ -2.58
RNU6-541P-201ENST00000384709 PIRTP0C851 137 aa-1.04□□□□□ -2.58
RNU6-541P-201ENST00000384709 SPANXA1Q9NS26 97 aa-1.04□□□□□ -2.58
RNU6-541P-201ENST00000384709 SCN3BQ9NY72 215 aa-1.04□□□□□ -2.58
RNU6-541P-201ENST00000384709 ERCC6L2Q5T890 1561 aa-1.04□□□□□ -2.58
RNU6-541P-201ENST00000384709 PCLOQ9Y6V0 5065 aa-1.05□□□□□ -2.58
RNU6-541P-201ENST00000384709 K7EQZ3 153 aa-1.05□□□□□ -2.58
RNU6-541P-201ENST00000384709 DBIP07108 87 aaKnown RBP-1.05□□□□□ -2.58
RNU6-541P-201ENST00000384709 CMPK1P30085 196 aa-1.05□□□□□ -2.58
RNU6-541P-201ENST00000384709 CCL18P55774 89 aa-1.05□□□□□ -2.58
RNU6-541P-201ENST00000384709 CFAP126Q5VTH2 177 aa-1.05□□□□□ -2.58
RNU6-541P-201ENST00000384709 MIC13Q5XKP0 118 aa-1.05□□□□□ -2.58
RNU6-541P-201ENST00000384709 TP53AIP1Q9HCN2 124 aa-1.05□□□□□ -2.58
RNU6-541P-201ENST00000384709 ARHGEF10O15013 1369 aa-1.06□□□□□ -2.58
RNU6-541P-201ENST00000384709 H0YJX3 145 aa-1.06□□□□□ -2.58
RNU6-541P-201ENST00000384709 CCDC153Q494R4 210 aa-1.06□□□□□ -2.58
RNU6-541P-201ENST00000384709 SMIM15Q7Z3B0 74 aa-1.06□□□□□ -2.58
RNU6-541P-201ENST00000384709 MXRA5Q9NR99 2828 aa-1.06□□□□□ -2.58
RNU6-541P-201ENST00000384709 NCS1P62166 190 aa-1.07□□□□□ -2.58
RNU6-541P-201ENST00000384709 UBE2G1P62253 170 aa-1.07□□□□□ -2.58
RNU6-541P-201ENST00000384709 KRTAP19-8Q3LI54 63 aa-1.07□□□□□ -2.58
RNU6-541P-201ENST00000384709 MMGT1Q8N4V1 131 aa-1.07□□□□□ -2.58
RNU6-541P-201ENST00000384709 ARAP2Q8WZ64 1704 aa-1.07□□□□□ -2.58
RNU6-541P-201ENST00000384709 CASKIN1Q8WXD9 1431 aa-1.07□□□□□ -2.58
RNU6-541P-201ENST00000384709 PRG4Q92954 1404 aaPredicted RBP-1.07□□□□□ -2.58
RNU6-541P-201ENST00000384709 NCR2O95944 276 aa-1.08□□□□□ -2.58
RNU6-541P-201ENST00000384709 TSPAN19P0C672 248 aa-1.08□□□□□ -2.58
RNU6-541P-201ENST00000384709 SMIM6P0DI80 62 aa-1.08□□□□□ -2.58
RNU6-541P-201ENST00000384709 CCL8P80075 99 aa-1.08□□□□□ -2.58
RNU6-541P-201ENST00000384709 DCDP81605 110 aaKnown RBP-1.08□□□□□ -2.58
RNU6-541P-201ENST00000384709 ALX1Q15699 326 aa-1.08□□□□□ -2.58
RNU6-541P-201ENST00000384709 CEP152O94986 1710 aa-1.09□□□□□ -2.58
RNU6-541P-201ENST00000384709 MRC1P22897 1456 aa-1.09□□□□□ -2.58
RNU6-541P-201ENST00000384709 IGLC6P0CF74 106 aa-1.09□□□□□ -2.58
RNU6-541P-201ENST00000384709 CBLN1P23435 193 aa-1.09□□□□□ -2.58
RNU6-541P-201ENST00000384709 MRPL40Q9NQ50 206 aaKnown RBP-1.09□□□□□ -2.58
RNU6-541P-201ENST00000384709 LINC00312Q9Y6C7 94 aa-1.09□□□□□ -2.58
RNU6-541P-201ENST00000384709 HERC2O95714 4834 aa-1.09□□□□□ -2.58
RNU6-541P-201ENST00000384709 DISP2A7MBM2 1401 aa-1.09□□□□□ -2.58
RNU6-541P-201ENST00000384709 RIMS1Q86UR5 1692 aaKnown RBP-1.1□□□□□ -2.58
RNU6-541P-201ENST00000384709 FOCADQ5VW36 1801 aa-1.1□□□□□ -2.59
RNU6-541P-201ENST00000384709 WDR7Q9Y4E6 1490 aa-1.1□□□□□ -2.59
RNU6-541P-201ENST00000384709 FAM236AA0A1B0GUQ0 79 aa-1.1□□□□□ -2.59
RNU6-541P-201ENST00000384709 FAM236BA0A1B0GV22 79 aa-1.1□□□□□ -2.59
RNU6-541P-201ENST00000384709 FAM92AA1XBS5 289 aa-1.1□□□□□ -2.59
RNU6-541P-201ENST00000384709 NPFFO15130 113 aa-1.1□□□□□ -2.59
RNU6-541P-201ENST00000384709 S100A5P33763 92 aa-1.1□□□□□ -2.59
RNU6-541P-201ENST00000384709 SPAG11AQ6PDA7 123 aa-1.1□□□□□ -2.59
RNU6-541P-201ENST00000384709 Q6ZUT4 128 aa-1.1□□□□□ -2.59
RNU6-541P-201ENST00000384709 AGPAT4-IT1Q9H0P7 198 aa-1.1□□□□□ -2.59
RNU6-541P-201ENST00000384709 DNAH6Q9C0G6 4158 aa-1.11□□□□□ -2.59
RNU6-541P-201ENST00000384709 RAPGEF6Q8TEU7 1601 aa-1.11□□□□□ -2.59
RNU6-541P-201ENST00000384709 IFT140Q96RY7 1462 aa-1.11□□□□□ -2.59
RNU6-541P-201ENST00000384709 ZFHX3Q15911 3703 aa-1.11□□□□□ -2.59
RNU6-541P-201ENST00000384709 BICRAQ9NZM4 1560 aa-1.11□□□□□ -2.59
RNU6-541P-201ENST00000384709 TRBV6-1A0A0K0K1D8 114 aa-1.11□□□□□ -2.59
RNU6-541P-201ENST00000384709 S100A3P33764 101 aa-1.11□□□□□ -2.59
RNU6-541P-201ENST00000384709 HAMPP81172 84 aa-1.11□□□□□ -2.59
RNU6-541P-201ENST00000384709 RPL7L1Q6DKI1 246 aaKnown RBP-1.11□□□□□ -2.59
RNU6-541P-201ENST00000384709 NBASA2RRP1 2371 aa-1.11□□□□□ -2.59
RNU6-541P-201ENST00000384709 IQSEC2Q5JU85 1478 aa-1.12□□□□□ -2.59
RNU6-541P-201ENST00000384709 SPAARA0A1B0GVQ0 90 aa-1.12□□□□□ -2.59
RNU6-541P-201ENST00000384709 GNG14A0A1W2PPG7 69 aa-1.12□□□□□ -2.59
RNU6-541P-201ENST00000384709 A6NIN4 97 aa-1.12□□□□□ -2.59
RNU6-541P-201ENST00000384709 M0R129 80 aa-1.12□□□□□ -2.59
RNU6-541P-201ENST00000384709 PIPP12273 146 aaPredicted RBP-1.12□□□□□ -2.59
RNU6-541P-201ENST00000384709 SPRR1BP22528 89 aa-1.12□□□□□ -2.59
RNU6-541P-201ENST00000384709 SPRR2AP35326 72 aa-1.12□□□□□ -2.59
RNU6-541P-201ENST00000384709 SMIM4Q8WVI0 70 aa-1.12□□□□□ -2.59
RNU6-541P-201ENST00000384709 NPVFQ9HCQ7 196 aa-1.12□□□□□ -2.59
RNU6-541P-201ENST00000384709 STARD9Q9P2P6 4700 aa-1.12□□□□□ -2.59
RNU6-541P-201ENST00000384709 PKD1P98161 4303 aa-1.12□□□□□ -2.59
RNU6-541P-201ENST00000384709 SHROOM2Q13796 1616 aa-1.13□□□□□ -2.59
RNU6-541P-201ENST00000384709 SIX6O95475 246 aa-1.13□□□□□ -2.59
RNU6-541P-201ENST00000384709 LINC00694P0DN24 101 aa-1.13□□□□□ -2.59
RNU6-541P-201ENST00000384709 COX6B1P14854 86 aa-1.13□□□□□ -2.59
RNU6-541P-201ENST00000384709 HIST1H1AQ02539 215 aaPredicted RBP-1.13□□□□□ -2.59
RNU6-541P-201ENST00000384709 PIGYQ3MUY2 71 aa-1.13□□□□□ -2.59
RNU6-541P-201ENST00000384709 SCIMPQ6UWF3 145 aa-1.13□□□□□ -2.59
RNU6-541P-201ENST00000384709 DEFB123Q8N688 67 aa-1.13□□□□□ -2.59
RNU6-541P-201ENST00000384709 SDF2Q99470 211 aa-1.13□□□□□ -2.59
RNU6-541P-201ENST00000384709 LINC00472Q9H8W2 130 aa-1.13□□□□□ -2.59
RNU6-541P-201ENST00000384709 R4GMQ9 66 aa-1.13□□□□□ -2.59
RNU6-541P-201ENST00000384709 ZNF518AQ6AHZ1 1483 aa-1.13□□□□□ -2.59
RNU6-541P-201ENST00000384709 ANKRD36A6QL64 1941 aa-1.14□□□□□ -2.59
RNU6-541P-201ENST00000384709 NBPF19A0A087WUL8 3843 aa-1.14□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms