RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 RHODO00212 210 aa10.52□□□□□ -0.73
CLCN4-201ENST00000380829 MGPP08493 103 aa10.52□□□□□ -0.73
CLCN4-201ENST00000380829 DPH3P1Q9H4G8 78 aa10.52□□□□□ -0.73
CLCN4-201ENST00000380829 WNK1Q9H4A3 2382 aa10.52□□□□□ -0.73
CLCN4-201ENST00000380829 CYSRT1A8MQ03 144 aa10.52□□□□□ -0.73
CLCN4-201ENST00000380829 H7C1H1 209 aa10.52□□□□□ -0.73
CLCN4-201ENST00000380829 GAGE12JA6NER3 117 aa10.51□□□□□ -0.73
CLCN4-201ENST00000380829 GAGE7O76087 117 aa10.51□□□□□ -0.73
CLCN4-201ENST00000380829 GAGE12FP0CL80 117 aa10.51□□□□□ -0.73
CLCN4-201ENST00000380829 GAGE12GP0CL81 117 aa10.51□□□□□ -0.73
CLCN4-201ENST00000380829 GAGE12IP0CL82 117 aa10.51□□□□□ -0.73
CLCN4-201ENST00000380829 GAGE4Q13068 117 aa10.51□□□□□ -0.73
CLCN4-201ENST00000380829 DEFB114Q30KQ6 69 aa10.51□□□□□ -0.73
CLCN4-201ENST00000380829 JPT2Q9H910 190 aa10.51□□□□□ -0.73
CLCN4-201ENST00000380829 MDFICQ9P1T7 246 aa10.51□□□□□ -0.73
CLCN4-201ENST00000380829 GAGE2BQ13066 116 aa10.5□□□□□ -0.73
CLCN4-201ENST00000380829 GAGE2EQ4V326 116 aa10.5□□□□□ -0.73
CLCN4-201ENST00000380829 Q8N1Y9 231 aa10.5□□□□□ -0.73
CLCN4-201ENST00000380829 GAGE2DQ9UEU5 116 aa10.5□□□□□ -0.73
CLCN4-201ENST00000380829 CCL24O00175 119 aa10.5□□□□□ -0.73
CLCN4-201ENST00000380829 SNCGO76070 127 aa10.5□□□□□ -0.73
CLCN4-201ENST00000380829 NDUFA11Q86Y39 141 aa10.5□□□□□ -0.73
CLCN4-201ENST00000380829 RPL39LQ96EH5 51 aaKnown RBP10.5□□□□□ -0.73
CLCN4-201ENST00000380829 IGHV3-16A0A0C4DH30 117 aa10.49□□□□□ -0.73
CLCN4-201ENST00000380829 NXPH4O95158 308 aa10.49□□□□□ -0.73
CLCN4-201ENST00000380829 HIVEP2P31629 2446 aa10.49□□□□□ -0.73
CLCN4-201ENST00000380829 RASL10AQ92737 203 aa10.49□□□□□ -0.73
CLCN4-201ENST00000380829 IGHV1OR15-1A0A075B7D0 117 aa10.48□□□□□ -0.73
CLCN4-201ENST00000380829 RBMY1BA6NDE4 496 aaKnown RBP10.48□□□□□ -0.73
CLCN4-201ENST00000380829 RBMY1EA6NEQ0 496 aaKnown RBP10.48□□□□□ -0.73
CLCN4-201ENST00000380829 H3BMM0 161 aa10.48□□□□□ -0.73
CLCN4-201ENST00000380829 RBMY1DP0C7P1 496 aaKnown RBP10.48□□□□□ -0.73
CLCN4-201ENST00000380829 RBMY1A1P0DJD3 496 aaKnown RBP10.48□□□□□ -0.73
CLCN4-201ENST00000380829 RBMY1CP0DJD4 496 aa10.48□□□□□ -0.73
CLCN4-201ENST00000380829 HILS1P60008 231 aa10.48□□□□□ -0.73
CLCN4-201ENST00000380829 RBMY1FQ15415 496 aaKnown RBP10.48□□□□□ -0.73
CLCN4-201ENST00000380829 TRPT1Q86TN4 253 aaKnown RBP10.48□□□□□ -0.73
CLCN4-201ENST00000380829 SBSPONQ8IVN8 264 aa10.48□□□□□ -0.73
CLCN4-201ENST00000380829 MAP6D1Q9H9H5 199 aa10.48□□□□□ -0.73
CLCN4-201ENST00000380829 A0A087WWL8 130 aa10.48□□□□□ -0.73
CLCN4-201ENST00000380829 SCGB1C2P0DMR2 95 aa10.48□□□□□ -0.73
CLCN4-201ENST00000380829 HTN1P15515 57 aa10.48□□□□□ -0.73
CLCN4-201ENST00000380829 C3orf56Q8N813 242 aa10.48□□□□□ -0.73
CLCN4-201ENST00000380829 VCX2Q9H322 139 aa10.48□□□□□ -0.73
CLCN4-201ENST00000380829 C16orf95Q9H693 158 aa10.48□□□□□ -0.73
CLCN4-201ENST00000380829 C9JAW5 83 aa10.47□□□□□ -0.73
CLCN4-201ENST00000380829 TMEM262E9PQX1 116 aa10.47□□□□□ -0.73
CLCN4-201ENST00000380829 SLC25A20O43772 301 aa10.47□□□□□ -0.73
CLCN4-201ENST00000380829 TTC32Q5I0X7 151 aa10.47□□□□□ -0.73
CLCN4-201ENST00000380829 C9orf85Q96MD7 179 aa10.47□□□□□ -0.73
CLCN4-201ENST00000380829 SCGB3A1Q96QR1 104 aa10.47□□□□□ -0.73
CLCN4-201ENST00000380829 NIPBLQ6KC79 2804 aaeCLIP10.47□□□□□ -0.73
CLCN4-201ENST00000380829 TRAV2A0A0B4J234 112 aa10.47□□□□□ -0.73
CLCN4-201ENST00000380829 IFITM1P13164 125 aa10.47□□□□□ -0.73
CLCN4-201ENST00000380829 EMP1P54849 157 aa10.47□□□□□ -0.73
CLCN4-201ENST00000380829 ZNF256Q9Y2P7 627 aaPredicted RBP10.47□□□□□ -0.73
CLCN4-201ENST00000380829 KIF25-AS1Q9Y6Z4 181 aa10.47□□□□□ -0.73
CLCN4-201ENST00000380829 TRAV12-1A0A0B4J245 112 aa10.46□□□□□ -0.73
CLCN4-201ENST00000380829 LY6G6DO95868 133 aa10.46□□□□□ -0.73
CLCN4-201ENST00000380829 CFC1BP0CG36 223 aa10.46□□□□□ -0.73
CLCN4-201ENST00000380829 CFC1P0CG37 223 aa10.46□□□□□ -0.73
CLCN4-201ENST00000380829 LINC00315P59091 139 aa10.46□□□□□ -0.73
CLCN4-201ENST00000380829 SUMO2P61956 95 aaKnown RBP10.46□□□□□ -0.73
CLCN4-201ENST00000380829 LYRM7Q5U5X0 104 aa10.46□□□□□ -0.73
CLCN4-201ENST00000380829 NEXN-AS1Q8NBZ9 246 aa10.46□□□□□ -0.73
CLCN4-201ENST00000380829 SMIM2Q9BVW6 85 aa10.46□□□□□ -0.73
CLCN4-201ENST00000380829 FAM74A4Q5TZK3 123 aa10.46□□□□□ -0.74
CLCN4-201ENST00000380829 PRM2P04554 102 aa10.45□□□□□ -0.74
CLCN4-201ENST00000380829 BAALCQ8WXS3 180 aa10.45□□□□□ -0.74
CLCN4-201ENST00000380829 F5H697 171 aa10.44□□□□□ -0.74
CLCN4-201ENST00000380829 H7C2G1 150 aa10.44□□□□□ -0.74
CLCN4-201ENST00000380829 DEFB104AQ8WTQ1 72 aa10.44□□□□□ -0.74
CLCN4-201ENST00000380829 NTN5Q8WTR8 489 aaPredicted RBP10.44□□□□□ -0.74
CLCN4-201ENST00000380829 A8MTW9 85 aa10.44□□□□□ -0.74
CLCN4-201ENST00000380829 A0A0J9YY99 117 aa10.43□□□□□ -0.74
CLCN4-201ENST00000380829 ODF3L2Q3SX64 289 aa10.43□□□□□ -0.74
CLCN4-201ENST00000380829 SUMO4Q6EEV6 95 aa10.43□□□□□ -0.74
CLCN4-201ENST00000380829 C10orf126Q8N4M7 172 aa10.43□□□□□ -0.74
CLCN4-201ENST00000380829 POM121L12Q8N7R1 296 aa10.43□□□□□ -0.74
CLCN4-201ENST00000380829 NSUN5P1Q3KNT7 163 aa10.43□□□□□ -0.74
CLCN4-201ENST00000380829 HIVEP1P15822 2718 aa10.42□□□□□ -0.74
CLCN4-201ENST00000380829 TOMM6Q96B49 74 aa10.42□□□□□ -0.74
CLCN4-201ENST00000380829 TRGV11A0A075B6L2 103 aa10.42□□□□□ -0.74
CLCN4-201ENST00000380829 TEX49A0A1B0GTD5 131 aa10.42□□□□□ -0.74
CLCN4-201ENST00000380829 IGHV3-30P01768 117 aa10.42□□□□□ -0.74
CLCN4-201ENST00000380829 IGHV3-30-5P0DP03 117 aa10.42□□□□□ -0.74
CLCN4-201ENST00000380829 TSPEAR-AS2P59090 65 aa10.42□□□□□ -0.74
CLCN4-201ENST00000380829 ZNF876PQ49A33 203 aa10.42□□□□□ -0.74
CLCN4-201ENST00000380829 MEIG1Q5JSS6 88 aa10.42□□□□□ -0.74
CLCN4-201ENST00000380829 EIF4EBP3O60516 100 aaPredicted RBP10.41□□□□□ -0.74
CLCN4-201ENST00000380829 PROK1P58294 105 aa10.41□□□□□ -0.74
CLCN4-201ENST00000380829 ZNF56Q15929 161 aa10.41□□□□□ -0.74
CLCN4-201ENST00000380829 C2orf66Q6UXQ4 117 aa10.41□□□□□ -0.74
CLCN4-201ENST00000380829 C15orf53Q8NAA6 179 aa10.41□□□□□ -0.74
CLCN4-201ENST00000380829 PRO1854Q9UHT4 67 aa10.41□□□□□ -0.74
CLCN4-201ENST00000380829 TRAV25A0A0B4J276 109 aa10.4□□□□□ -0.74
CLCN4-201ENST00000380829 C11orf86A6NJI1 115 aa10.4□□□□□ -0.74
CLCN4-201ENST00000380829 ADARB2-AS1A8MUL3 147 aa10.4□□□□□ -0.74
CLCN4-201ENST00000380829 CRYGDP07320 174 aa10.4□□□□□ -0.74
CLCN4-201ENST00000380829 INAFM1C9JVW0 142 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 200.5 ms