RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 IGHV1-24A0A0C4DH33 117 aa12.49□□□□□ -0.41
TMEM88B-201ENST00000378821 TMEM262E9PQX1 116 aa12.49□□□□□ -0.41
TMEM88B-201ENST00000378821 ADCYAP1P18509 176 aa12.49□□□□□ -0.41
TMEM88B-201ENST00000378821 RAB4AP20338 218 aa12.49□□□□□ -0.41
TMEM88B-201ENST00000378821 KCNIP4Q6PIL6 250 aa12.49□□□□□ -0.41
TMEM88B-201ENST00000378821 GAGE6Q13070 117 aa12.48□□□□□ -0.41
TMEM88B-201ENST00000378821 SRRM2Q9UQ35 2752 aaKnown RBP12.48□□□□□ -0.41
TMEM88B-201ENST00000378821 VPS13BQ7Z7G8 4022 aa12.47□□□□□ -0.41
TMEM88B-201ENST00000378821 PPP1R2P9O14990 202 aa12.47□□□□□ -0.41
TMEM88B-201ENST00000378821 INAFM2P0DMQ5 153 aa12.47□□□□□ -0.41
TMEM88B-201ENST00000378821 MRPL54Q6P161 138 aaKnown RBP12.47□□□□□ -0.41
TMEM88B-201ENST00000378821 ATRAIDQ6UW56 229 aa12.47□□□□□ -0.41
TMEM88B-201ENST00000378821 Q6ZSA8 131 aa12.47□□□□□ -0.41
TMEM88B-201ENST00000378821 COMMD7Q86VX2 200 aa12.47□□□□□ -0.41
TMEM88B-201ENST00000378821 FAM30AQ9NZY2 134 aa12.47□□□□□ -0.41
TMEM88B-201ENST00000378821 TMEM218A2RU14 115 aa12.46□□□□□ -0.41
TMEM88B-201ENST00000378821 RPS10P46783 165 aaKnown RBP12.46□□□□□ -0.41
TMEM88B-201ENST00000378821 CAMPP49913 170 aa12.46□□□□□ -0.41
TMEM88B-201ENST00000378821 PKIAP61925 76 aa12.46□□□□□ -0.41
TMEM88B-201ENST00000378821 COTL1Q14019 142 aa12.46□□□□□ -0.41
TMEM88B-201ENST00000378821 Q8N976 141 aa12.46□□□□□ -0.41
TMEM88B-201ENST00000378821 MRAP2Q96G30 205 aa12.46□□□□□ -0.41
TMEM88B-201ENST00000378821 TMEM243Q9BU79 118 aa12.46□□□□□ -0.41
TMEM88B-201ENST00000378821 TRBV6-5A0A0K0K1A5 114 aa12.45□□□□□ -0.42
TMEM88B-201ENST00000378821 A0A1B0GXF2 115 aa12.45□□□□□ -0.42
TMEM88B-201ENST00000378821 SDHAF1A6NFY7 115 aa12.45□□□□□ -0.42
TMEM88B-201ENST00000378821 SMKR1H3BMG3 65 aa12.45□□□□□ -0.42
TMEM88B-201ENST00000378821 NCR2O95944 276 aa12.45□□□□□ -0.42
TMEM88B-201ENST00000378821 SMR3BP02814 79 aaPredicted RBP12.45□□□□□ -0.42
TMEM88B-201ENST00000378821 ELOBQ15370 118 aa12.45□□□□□ -0.42
TMEM88B-201ENST00000378821 UBE2WQ96B02 151 aa12.45□□□□□ -0.42
TMEM88B-201ENST00000378821 A0A1B0GW15 77 aa12.44□□□□□ -0.42
TMEM88B-201ENST00000378821 F8W036 122 aa12.44□□□□□ -0.42
TMEM88B-201ENST00000378821 MT-ND4LP03901 98 aa12.44□□□□□ -0.42
TMEM88B-201ENST00000378821 AMTP48728 403 aa12.44□□□□□ -0.42
TMEM88B-201ENST00000378821 RBX1P62877 108 aa12.44□□□□□ -0.42
TMEM88B-201ENST00000378821 ANAPC16Q96DE5 110 aa12.44□□□□□ -0.42
TMEM88B-201ENST00000378821 RMI2Q96E14 147 aa12.44□□□□□ -0.42
TMEM88B-201ENST00000378821 FAM229AH3BQW9 127 aa12.43□□□□□ -0.42
TMEM88B-201ENST00000378821 ANGP03950 147 aaKnown RBP12.43□□□□□ -0.42
TMEM88B-201ENST00000378821 HBBP68871 147 aa12.43□□□□□ -0.42
TMEM88B-201ENST00000378821 MRPL51Q4U2R6 128 aaKnown RBP12.43□□□□□ -0.42
TMEM88B-201ENST00000378821 FAM104BQ5XKR9 115 aa12.43□□□□□ -0.42
TMEM88B-201ENST00000378821 ST20Q9HBF5 79 aa12.43□□□□□ -0.42
TMEM88B-201ENST00000378821 LINC00862A6NCI5 91 aa12.42□□□□□ -0.42
TMEM88B-201ENST00000378821 HAMPP81172 84 aa12.42□□□□□ -0.42
TMEM88B-201ENST00000378821 ENHOQ6UWT2 76 aa12.42□□□□□ -0.42
TMEM88B-201ENST00000378821 BAALCQ8WXS3 180 aa12.42□□□□□ -0.42
TMEM88B-201ENST00000378821 DNAH8Q96JB1 4490 aa12.42□□□□□ -0.42
TMEM88B-201ENST00000378821 IGKV2D-24A0A075B6R9 120 aa12.41□□□□□ -0.42
TMEM88B-201ENST00000378821 LECT2O14960 151 aa12.41□□□□□ -0.42
TMEM88B-201ENST00000378821 CRPP02741 224 aa12.41□□□□□ -0.42
TMEM88B-201ENST00000378821 NRACQ8N912 160 aa12.41□□□□□ -0.42
TMEM88B-201ENST00000378821 I3L3M4 83 aa12.4□□□□□ -0.42
TMEM88B-201ENST00000378821 APCSP02743 223 aa12.4□□□□□ -0.42
TMEM88B-201ENST00000378821 S100A8P05109 93 aa12.4□□□□□ -0.42
TMEM88B-201ENST00000378821 PMCHP20382 165 aa12.4□□□□□ -0.42
TMEM88B-201ENST00000378821 Q0VG73 95 aa12.4□□□□□ -0.42
TMEM88B-201ENST00000378821 CLPSL2Q6UWE3 100 aa12.4□□□□□ -0.42
TMEM88B-201ENST00000378821 ATP5L2Q7Z4Y8 100 aa12.4□□□□□ -0.42
TMEM88B-201ENST00000378821 SEC11CQ9BY50 192 aa12.4□□□□□ -0.42
TMEM88B-201ENST00000378821 IGLV4-60A0A075B6I1 120 aa12.39□□□□□ -0.43
TMEM88B-201ENST00000378821 UBE2L6O14933 153 aa12.39□□□□□ -0.43
TMEM88B-201ENST00000378821 TSHBP01222 138 aa12.39□□□□□ -0.43
TMEM88B-201ENST00000378821 POLR2KP53803 58 aaKnown RBP12.39□□□□□ -0.43
TMEM88B-201ENST00000378821 C20orf203Q8NBC4 194 aa12.39□□□□□ -0.43
TMEM88B-201ENST00000378821 PRR34Q9NV39 138 aa12.39□□□□□ -0.43
TMEM88B-201ENST00000378821 TMEM242Q9NWH2 141 aa12.39□□□□□ -0.43
TMEM88B-201ENST00000378821 A0A1B0GUV1 79 aa12.38□□□□□ -0.43
TMEM88B-201ENST00000378821 LINC00269Q8N2A0 174 aa12.38□□□□□ -0.43
TMEM88B-201ENST00000378821 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.37□□□□□ -0.43
TMEM88B-201ENST00000378821 TRBV27A0A0K0K1C4 114 aa12.37□□□□□ -0.43
TMEM88B-201ENST00000378821 IGKV2-29A2NJV5 120 aaPredicted RBP12.37□□□□□ -0.43
TMEM88B-201ENST00000378821 C1orf43Q9BWL3 253 aa12.37□□□□□ -0.43
TMEM88B-201ENST00000378821 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.36□□□□□ -0.43
TMEM88B-201ENST00000378821 PPP1R17O96001 155 aa12.36□□□□□ -0.43
TMEM88B-201ENST00000378821 CKS2P33552 79 aa12.36□□□□□ -0.43
TMEM88B-201ENST00000378821 SUMO2P61956 95 aaKnown RBP12.36□□□□□ -0.43
TMEM88B-201ENST00000378821 MIAQ16674 131 aa12.36□□□□□ -0.43
TMEM88B-201ENST00000378821 HERC1Q15751 4861 aa12.36□□□□□ -0.43
TMEM88B-201ENST00000378821 D6R8Y8 96 aa12.35□□□□□ -0.43
TMEM88B-201ENST00000378821 C10orf91Q5T1B1 145 aa12.35□□□□□ -0.43
TMEM88B-201ENST00000378821 ESDP10768 282 aa12.34□□□□□ -0.43
TMEM88B-201ENST00000378821 REG3AQ06141 175 aa12.34□□□□□ -0.43
TMEM88B-201ENST00000378821 BTF3L4Q96K17 158 aa12.34□□□□□ -0.43
TMEM88B-201ENST00000378821 DMBT1Q9UGM3 2413 aaPredicted RBP12.34□□□□□ -0.43
TMEM88B-201ENST00000378821 MYCBP2O75592 4640 aa12.34□□□□□ -0.43
TMEM88B-201ENST00000378821 TRBV24-1A0A075B6N3 115 aa12.33□□□□□ -0.44
TMEM88B-201ENST00000378821 H7C423 109 aa12.33□□□□□ -0.44
TMEM88B-201ENST00000378821 VCYO14598 125 aa12.33□□□□□ -0.44
TMEM88B-201ENST00000378821 IMMP2LQ96T52 175 aa12.33□□□□□ -0.44
TMEM88B-201ENST00000378821 CTDSP1Q9GZU7 261 aa12.33□□□□□ -0.44
TMEM88B-201ENST00000378821 CARHSP1Q9Y2V2 147 aaKnown RBP12.33□□□□□ -0.44
TMEM88B-201ENST00000378821 FLG2Q5D862 2391 aaPredicted RBP12.32□□□□□ -0.44
TMEM88B-201ENST00000378821 TNFRSF6BO95407 300 aa12.32□□□□□ -0.44
TMEM88B-201ENST00000378821 NPYP01303 97 aa12.32□□□□□ -0.44
TMEM88B-201ENST00000378821 FGF6P10767 208 aa12.32□□□□□ -0.44
TMEM88B-201ENST00000378821 AMMECR1LQ6DCA0 310 aa12.32□□□□□ -0.44
TMEM88B-201ENST00000378821 RNASEKQ6P5S7 137 aaKnown RBP12.32□□□□□ -0.44
TMEM88B-201ENST00000378821 KRTAP26-1Q6PEX3 210 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms