RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 PMCHL1Q16048 86 aa7.34□□□□□ -1.23
PDPN-203ENST00000376061 Q6ZTC4 211 aa7.34□□□□□ -1.23
PDPN-203ENST00000376061 FAM19A2Q8N3H0 131 aa7.34□□□□□ -1.23
PDPN-203ENST00000376061 HIST1H2BLQ99880 126 aa7.34□□□□□ -1.23
PDPN-203ENST00000376061 PRO0255Q9UI72 69 aa7.34□□□□□ -1.23
PDPN-203ENST00000376061 HHLA3Q9XRX5 114 aa7.34□□□□□ -1.23
PDPN-203ENST00000376061 TRBV7-3A0A075B6L6 115 aa7.33□□□□□ -1.24
PDPN-203ENST00000376061 A0A096LNJ9 63 aa7.33□□□□□ -1.24
PDPN-203ENST00000376061 LOC105371267A0A1B0GV96 52 aa7.33□□□□□ -1.24
PDPN-203ENST00000376061 GAGE12JA6NER3 117 aa7.33□□□□□ -1.24
PDPN-203ENST00000376061 VCYO14598 125 aa7.33□□□□□ -1.24
PDPN-203ENST00000376061 TSHBP01222 138 aa7.33□□□□□ -1.24
PDPN-203ENST00000376061 S100A2P29034 98 aa7.33□□□□□ -1.24
PDPN-203ENST00000376061 AMTP48728 403 aa7.33□□□□□ -1.24
PDPN-203ENST00000376061 NANOS2P60321 138 aaKnown RBP7.33□□□□□ -1.24
PDPN-203ENST00000376061 UBE2D3P61077 147 aa7.33□□□□□ -1.24
PDPN-203ENST00000376061 UBE2D2P62837 147 aa7.33□□□□□ -1.24
PDPN-203ENST00000376061 RPL36AP83881 106 aaKnown RBP7.33□□□□□ -1.24
PDPN-203ENST00000376061 GAGE1Q13065 139 aa7.33□□□□□ -1.24
PDPN-203ENST00000376061 GAGE4Q13068 117 aa7.33□□□□□ -1.24
PDPN-203ENST00000376061 GAGE5Q13069 117 aa7.33□□□□□ -1.24
PDPN-203ENST00000376061 GAGE13Q4V321 117 aa7.33□□□□□ -1.24
PDPN-203ENST00000376061 ZNRF2Q8NHG8 242 aa7.33□□□□□ -1.24
PDPN-203ENST00000376061 C11orf45Q8TAV5 145 aa7.33□□□□□ -1.24
PDPN-203ENST00000376061 RPL36ALQ969Q0 106 aaKnown RBP7.33□□□□□ -1.24
PDPN-203ENST00000376061 PRADC1Q9BSG0 188 aa7.33□□□□□ -1.24
PDPN-203ENST00000376061 F5H768 121 aa7.33□□□□□ -1.24
PDPN-203ENST00000376061 I3L3M4 83 aa7.33□□□□□ -1.24
PDPN-203ENST00000376061 K7EMI3 77 aa7.33□□□□□ -1.24
PDPN-203ENST00000376061 LAGE3Q14657 143 aa7.33□□□□□ -1.24
PDPN-203ENST00000376061 DEFB104AQ8WTQ1 72 aa7.33□□□□□ -1.24
PDPN-203ENST00000376061 PHLDA1Q8WV24 401 aaPredicted RBP7.33□□□□□ -1.24
PDPN-203ENST00000376061 VSIG2Q96IQ7 327 aa7.33□□□□□ -1.24
PDPN-203ENST00000376061 CDIP1Q9H305 208 aa7.33□□□□□ -1.24
PDPN-203ENST00000376061 TRAV26-1A0A087WT03 109 aa7.32□□□□□ -1.24
PDPN-203ENST00000376061 IGHV3-38A0A0C4DH36 116 aa7.32□□□□□ -1.24
PDPN-203ENST00000376061 A0A0J9YY99 117 aa7.32□□□□□ -1.24
PDPN-203ENST00000376061 PAX4O43316 350 aa7.32□□□□□ -1.24
PDPN-203ENST00000376061 NHLRC4P0CG21 123 aaPredicted RBP7.32□□□□□ -1.24
PDPN-203ENST00000376061 FABP4P15090 132 aa7.32□□□□□ -1.24
PDPN-203ENST00000376061 GYPEP15421 78 aa7.32□□□□□ -1.24
PDPN-203ENST00000376061 TMEM18Q96B42 140 aa7.32□□□□□ -1.24
PDPN-203ENST00000376061 PACRGQ96M98 296 aaPredicted RBP7.32□□□□□ -1.24
PDPN-203ENST00000376061 KIR2DL4Q99706 377 aa7.32□□□□□ -1.24
PDPN-203ENST00000376061 FBN3Q75N90 2809 aa7.31□□□□□ -1.24
PDPN-203ENST00000376061 EIF4EBP3O60516 100 aaPredicted RBP7.31□□□□□ -1.24
PDPN-203ENST00000376061 HBDP02042 147 aa7.31□□□□□ -1.24
PDPN-203ENST00000376061 FCER1GP30273 86 aa7.31□□□□□ -1.24
PDPN-203ENST00000376061 ORMDL2Q53FV1 153 aa7.31□□□□□ -1.24
PDPN-203ENST00000376061 DAZ4Q86SG3 579 aaKnown RBP7.31□□□□□ -1.24
PDPN-203ENST00000376061 DAZ3Q9NR90 486 aaKnown RBP7.31□□□□□ -1.24
PDPN-203ENST00000376061 NUDT3O95989 172 aa7.3□□□□□ -1.24
PDPN-203ENST00000376061 TNP2Q05952 138 aa7.3□□□□□ -1.24
PDPN-203ENST00000376061 COTL1Q14019 142 aa7.3□□□□□ -1.24
PDPN-203ENST00000376061 DEFB131BA0A096LNP1 70 aa7.29□□□□□ -1.24
PDPN-203ENST00000376061 LINC00173Q6ZV60 143 aa7.29□□□□□ -1.24
PDPN-203ENST00000376061 TRAV10A0A0B4J240 114 aa7.28□□□□□ -1.24
PDPN-203ENST00000376061 LEPROTL1O95214 131 aa7.28□□□□□ -1.24
PDPN-203ENST00000376061 C2orf66Q6UXQ4 117 aa7.28□□□□□ -1.24
PDPN-203ENST00000376061 NTM-AS1Q6ZSK4 140 aa7.28□□□□□ -1.24
PDPN-203ENST00000376061 OR10D4PQ8NGN7 298 aa7.28□□□□□ -1.24
PDPN-203ENST00000376061 H3BNG1 76 aa7.27□□□□□ -1.25
PDPN-203ENST00000376061 AKR1D1P51857 326 aa7.27□□□□□ -1.25
PDPN-203ENST00000376061 RPL39P62891 51 aaKnown RBP7.27□□□□□ -1.25
PDPN-203ENST00000376061 C20orf203Q8NBC4 194 aa7.27□□□□□ -1.25
PDPN-203ENST00000376061 ATP6V0E2Q8NHE4 81 aa7.27□□□□□ -1.25
PDPN-203ENST00000376061 TOMM6Q96B49 74 aa7.27□□□□□ -1.25
PDPN-203ENST00000376061 CHCHD7Q9BUK0 85 aa7.27□□□□□ -1.25
PDPN-203ENST00000376061 HSPB8Q9UJY1 196 aa7.27□□□□□ -1.25
PDPN-203ENST00000376061 CYSLTR1Q9Y271 337 aa7.27□□□□□ -1.25
PDPN-203ENST00000376061 CHTOPQ9Y3Y2 248 aaKnown RBP7.27□□□□□ -1.25
PDPN-203ENST00000376061 ICOSQ9Y6W8 199 aa7.27□□□□□ -1.25
PDPN-203ENST00000376061 A0A096LPF7 62 aa7.26□□□□□ -1.25
PDPN-203ENST00000376061 C1orf43Q9BWL3 253 aa7.26□□□□□ -1.25
PDPN-203ENST00000376061 GTSF1LQ9H1H1 148 aa7.26□□□□□ -1.25
PDPN-203ENST00000376061 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.25□□□□□ -1.25
PDPN-203ENST00000376061 IGKV2-29A2NJV5 120 aaPredicted RBP7.25□□□□□ -1.25
PDPN-203ENST00000376061 MALP21145 153 aa7.25□□□□□ -1.25
PDPN-203ENST00000376061 G0S2P27469 103 aa7.25□□□□□ -1.25
PDPN-203ENST00000376061 KRTDAPP60985 99 aa7.25□□□□□ -1.25
PDPN-203ENST00000376061 MRPL23Q16540 153 aaKnown RBP7.25□□□□□ -1.25
PDPN-203ENST00000376061 IFI27L1Q96BM0 104 aa7.25□□□□□ -1.25
PDPN-203ENST00000376061 TRBV6-8A0A0A6YYG3 113 aa7.24□□□□□ -1.25
PDPN-203ENST00000376061 ATP5LO75964 103 aa7.24□□□□□ -1.25
PDPN-203ENST00000376061 C3orf79P0CE67 100 aa7.24□□□□□ -1.25
PDPN-203ENST00000376061 TMEM97Q5BJF2 176 aa7.24□□□□□ -1.25
PDPN-203ENST00000376061 SH2D6Q7Z4S9 175 aa7.24□□□□□ -1.25
PDPN-203ENST00000376061 SCGB3A1Q96QR1 104 aa7.24□□□□□ -1.25
PDPN-203ENST00000376061 TMEM243Q9BU79 118 aa7.24□□□□□ -1.25
PDPN-203ENST00000376061 TRBV25-1A0A075B6N4 114 aa7.23□□□□□ -1.25
PDPN-203ENST00000376061 LINC01549A6NIU2 74 aa7.23□□□□□ -1.25
PDPN-203ENST00000376061 IGIPA6NJ69 53 aa7.23□□□□□ -1.25
PDPN-203ENST00000376061 ERASQ7Z444 233 aa7.23□□□□□ -1.25
PDPN-203ENST00000376061 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.22□□□□□ -1.25
PDPN-203ENST00000376061 SYS1-DBNDD2H3BUS1 97 aa7.22□□□□□ -1.25
PDPN-203ENST00000376061 SPATA12Q7Z6I5 190 aa7.22□□□□□ -1.25
PDPN-203ENST00000376061 Q8N976 141 aa7.22□□□□□ -1.25
PDPN-203ENST00000376061 TIMM17AQ99595 171 aa7.22□□□□□ -1.25
PDPN-203ENST00000376061 MAP1LC3CQ9BXW4 147 aa7.22□□□□□ -1.25
PDPN-203ENST00000376061 SPANXA1Q9NS26 97 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms