RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.6□□□□□ -1.03
PDE6C-201ENST00000371447 IGKV2-29A2NJV5 120 aaPredicted RBP8.6□□□□□ -1.03
PDE6C-201ENST00000371447 MED14OSP0DP75 135 aa8.6□□□□□ -1.03
PDE6C-201ENST00000371447 RPL32P62910 135 aaKnown RBP8.6□□□□□ -1.03
PDE6C-201ENST00000371447 LRRC75A-AS1Q8N1F1 130 aa8.6□□□□□ -1.03
PDE6C-201ENST00000371447 APOMO95445 188 aa8.6□□□□□ -1.03
PDE6C-201ENST00000371447 SPCS1Q9Y6A9 102 aa8.6□□□□□ -1.03
PDE6C-201ENST00000371447 ODF3L2Q3SX64 289 aa8.59□□□□□ -1.03
PDE6C-201ENST00000371447 LINC01006Q8NI28 216 aa8.59□□□□□ -1.03
PDE6C-201ENST00000371447 A0A0J9YXV3 536 aa8.59□□□□□ -1.03
PDE6C-201ENST00000371447 MYMXA0A1B0GTQ4 84 aa8.59□□□□□ -1.04
PDE6C-201ENST00000371447 PMVKQ15126 192 aa8.59□□□□□ -1.04
PDE6C-201ENST00000371447 SAMD5Q5TGI4 173 aa8.59□□□□□ -1.04
PDE6C-201ENST00000371447 TRPT1Q86TN4 253 aaKnown RBP8.59□□□□□ -1.04
PDE6C-201ENST00000371447 TENM1Q9UKZ4 2725 aa8.58□□□□□ -1.04
PDE6C-201ENST00000371447 C9orf118A6NHY6 69 aa8.58□□□□□ -1.04
PDE6C-201ENST00000371447 ZNRF2Q8NHG8 242 aa8.58□□□□□ -1.04
PDE6C-201ENST00000371447 RNF183Q96D59 192 aa8.58□□□□□ -1.04
PDE6C-201ENST00000371447 FAM110AQ9BQ89 295 aa8.58□□□□□ -1.04
PDE6C-201ENST00000371447 H7C2G1 150 aa8.58□□□□□ -1.04
PDE6C-201ENST00000371447 NXPH4O95158 308 aa8.58□□□□□ -1.04
PDE6C-201ENST00000371447 CEND1Q8N111 149 aa8.58□□□□□ -1.04
PDE6C-201ENST00000371447 IGIPA6NJ69 53 aa8.57□□□□□ -1.04
PDE6C-201ENST00000371447 GAGE12HA6NDE8 117 aa8.57□□□□□ -1.04
PDE6C-201ENST00000371447 A8MZ25 164 aa8.57□□□□□ -1.04
PDE6C-201ENST00000371447 H3BRM9 83 aa8.57□□□□□ -1.04
PDE6C-201ENST00000371447 I3L3M4 83 aa8.57□□□□□ -1.04
PDE6C-201ENST00000371447 INSP01308 110 aa8.57□□□□□ -1.04
PDE6C-201ENST00000371447 SCGB1A1P11684 91 aa8.57□□□□□ -1.04
PDE6C-201ENST00000371447 NPC2P61916 151 aa8.57□□□□□ -1.04
PDE6C-201ENST00000371447 TRBV27A0A0K0K1C4 114 aa8.56□□□□□ -1.04
PDE6C-201ENST00000371447 FABP2P12104 132 aa8.56□□□□□ -1.04
PDE6C-201ENST00000371447 ZNF415Q09FC8 603 aa8.56□□□□□ -1.04
PDE6C-201ENST00000371447 TRAV12-1A0A0B4J245 112 aa8.56□□□□□ -1.04
PDE6C-201ENST00000371447 IGKV3OR2-268A0A0C4DH90 116 aa8.56□□□□□ -1.04
PDE6C-201ENST00000371447 M0R2P5 195 aa8.56□□□□□ -1.04
PDE6C-201ENST00000371447 TSPEAR-AS2P59090 65 aa8.56□□□□□ -1.04
PDE6C-201ENST00000371447 RNF152Q8N8N0 203 aa8.56□□□□□ -1.04
PDE6C-201ENST00000371447 IGLV4-69A0A075B6H9 119 aa8.55□□□□□ -1.04
PDE6C-201ENST00000371447 Q8N2B8 174 aa8.55□□□□□ -1.04
PDE6C-201ENST00000371447 NOP10Q9NPE3 64 aaKnown RBP8.55□□□□□ -1.04
PDE6C-201ENST00000371447 Q6ZTI0 123 aa8.55□□□□□ -1.04
PDE6C-201ENST00000371447 ODF3Q96PU9 254 aa8.55□□□□□ -1.04
PDE6C-201ENST00000371447 HIVEP1P15822 2718 aa8.55□□□□□ -1.04
PDE6C-201ENST00000371447 LOC107984156A0A0G2JMH3 177 aa8.55□□□□□ -1.04
PDE6C-201ENST00000371447 A0A0U1RRA0 63 aa8.55□□□□□ -1.04
PDE6C-201ENST00000371447 ARL17AQ8IVW1 177 aa8.55□□□□□ -1.04
PDE6C-201ENST00000371447 TRAV8-3A0A0A6YYJ7 113 aa8.54□□□□□ -1.04
PDE6C-201ENST00000371447 A0A1W2PPM0 123 aa8.54□□□□□ -1.04
PDE6C-201ENST00000371447 HERVK_113P61574 105 aa8.54□□□□□ -1.04
PDE6C-201ENST00000371447 DGAT2L7PQ6IED9 249 aa8.54□□□□□ -1.04
PDE6C-201ENST00000371447 ANAPC13Q9BS18 74 aa8.54□□□□□ -1.04
PDE6C-201ENST00000371447 TEX48A0A1B0GUV7 120 aa8.54□□□□□ -1.04
PDE6C-201ENST00000371447 LGALS3P17931 250 aaKnown RBP8.54□□□□□ -1.04
PDE6C-201ENST00000371447 CFAP126Q5VTH2 177 aa8.54□□□□□ -1.04
PDE6C-201ENST00000371447 C20orf203Q8NBC4 194 aa8.54□□□□□ -1.04
PDE6C-201ENST00000371447 GAGE7O76087 117 aa8.54□□□□□ -1.04
PDE6C-201ENST00000371447 PRSS2P07478 247 aa8.54□□□□□ -1.04
PDE6C-201ENST00000371447 GAGE12FP0CL80 117 aa8.54□□□□□ -1.04
PDE6C-201ENST00000371447 GAGE12GP0CL81 117 aa8.54□□□□□ -1.04
PDE6C-201ENST00000371447 GAGE12IP0CL82 117 aa8.54□□□□□ -1.04
PDE6C-201ENST00000371447 C12orf74Q32Q52 190 aa8.54□□□□□ -1.04
PDE6C-201ENST00000371447 ZNF418Q8TF45 676 aaPredicted RBP8.54□□□□□ -1.04
PDE6C-201ENST00000371447 TRAV2A0A0B4J234 112 aa8.53□□□□□ -1.04
PDE6C-201ENST00000371447 KRTAP1-1Q07627 177 aa8.53□□□□□ -1.04
PDE6C-201ENST00000371447 TRGV2A0A075B6R0 118 aa8.53□□□□□ -1.04
PDE6C-201ENST00000371447 GAGE12JA6NER3 117 aa8.53□□□□□ -1.04
PDE6C-201ENST00000371447 E9PLD3 99 aa8.53□□□□□ -1.04
PDE6C-201ENST00000371447 GAGE4Q13068 117 aa8.53□□□□□ -1.04
PDE6C-201ENST00000371447 GAGE5Q13069 117 aa8.53□□□□□ -1.04
PDE6C-201ENST00000371447 GAGE13Q4V321 117 aa8.53□□□□□ -1.04
PDE6C-201ENST00000371447 H3BMG7 143 aa8.52□□□□□ -1.04
PDE6C-201ENST00000371447 NDUFA7O95182 113 aa8.52□□□□□ -1.04
PDE6C-201ENST00000371447 GAGE6Q13070 117 aa8.52□□□□□ -1.04
PDE6C-201ENST00000371447 C1orf158Q8N1D5 194 aa8.52□□□□□ -1.04
PDE6C-201ENST00000371447 F8P00451 2351 aa8.52□□□□□ -1.05
PDE6C-201ENST00000371447 PF4P02776 101 aa8.52□□□□□ -1.05
PDE6C-201ENST00000371447 ZNF625Q96I27 306 aaPredicted RBP8.52□□□□□ -1.05
PDE6C-201ENST00000371447 LINC00467Q9BRT7 94 aa8.52□□□□□ -1.05
PDE6C-201ENST00000371447 IGLV4-3A0A075B6K6 122 aa8.51□□□□□ -1.05
PDE6C-201ENST00000371447 LINC01549A6NIU2 74 aa8.51□□□□□ -1.05
PDE6C-201ENST00000371447 A8MWV9 139 aa8.51□□□□□ -1.05
PDE6C-201ENST00000371447 J3QQQ9 107 aa8.51□□□□□ -1.05
PDE6C-201ENST00000371447 POM121L12Q8N7R1 296 aa8.51□□□□□ -1.05
PDE6C-201ENST00000371447 J3QR89 54 aa8.51□□□□□ -1.05
PDE6C-201ENST00000371447 TMEM141Q96I45 108 aa8.51□□□□□ -1.05
PDE6C-201ENST00000371447 K7EP34 96 aa8.51□□□□□ -1.05
PDE6C-201ENST00000371447 SPINK8P0C7L1 97 aa8.51□□□□□ -1.05
PDE6C-201ENST00000371447 DEFB130BP0DP73 79 aa8.51□□□□□ -1.05
PDE6C-201ENST00000371447 DEFB130AP0DP74 79 aa8.51□□□□□ -1.05
PDE6C-201ENST00000371447 PPDPFQ9H3Y8 114 aa8.51□□□□□ -1.05
PDE6C-201ENST00000371447 HIGD1BQ9P298 99 aa8.51□□□□□ -1.05
PDE6C-201ENST00000371447 NSD1Q96L73 2696 aaPredicted RBP8.5□□□□□ -1.05
PDE6C-201ENST00000371447 TRAV13-1A0A0B4J241 112 aa8.5□□□□□ -1.05
PDE6C-201ENST00000371447 TRBV6-5A0A0K0K1A5 114 aa8.5□□□□□ -1.05
PDE6C-201ENST00000371447 C11orf72Q8NBR9 251 aa8.5□□□□□ -1.05
PDE6C-201ENST00000371447 TIMM17AQ99595 171 aa8.5□□□□□ -1.05
PDE6C-201ENST00000371447 LOC100131303A0A0U1RQF7 123 aa8.5□□□□□ -1.05
PDE6C-201ENST00000371447 IGLL5B9A064 214 aa8.5□□□□□ -1.05
PDE6C-201ENST00000371447 INAFM1C9JVW0 142 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms