RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 ICOSQ9Y6W8 199 aa11.08□□□□□ -0.64
PFDN4-201ENST00000371419 SACSQ9NZJ4 4579 aa11.08□□□□□ -0.64
PFDN4-201ENST00000371419 A0A087WWL8 130 aa11.07□□□□□ -0.64
PFDN4-201ENST00000371419 A0A096LPF7 62 aa11.07□□□□□ -0.64
PFDN4-201ENST00000371419 TRBV6-4A0A1B0GX49 114 aa11.07□□□□□ -0.64
PFDN4-201ENST00000371419 HBDP02042 147 aa11.07□□□□□ -0.64
PFDN4-201ENST00000371419 CRYGDP07320 174 aa11.07□□□□□ -0.64
PFDN4-201ENST00000371419 FAM74A4Q5TZK3 123 aa11.07□□□□□ -0.64
PFDN4-201ENST00000371419 PET117Q6UWS5 81 aa11.07□□□□□ -0.64
PFDN4-201ENST00000371419 C20orf78Q9BR46 151 aa11.07□□□□□ -0.64
PFDN4-201ENST00000371419 VAMP8Q9BV40 100 aa11.07□□□□□ -0.64
PFDN4-201ENST00000371419 SYS1-DBNDD2H3BUS1 97 aa11.06□□□□□ -0.64
PFDN4-201ENST00000371419 GYPEP15421 78 aa11.06□□□□□ -0.64
PFDN4-201ENST00000371419 MRPL23Q16540 153 aaKnown RBP11.06□□□□□ -0.64
PFDN4-201ENST00000371419 SLC25A29Q8N8R3 303 aa11.06□□□□□ -0.64
PFDN4-201ENST00000371419 PRADC1Q9BSG0 188 aa11.06□□□□□ -0.64
PFDN4-201ENST00000371419 VPS13DQ5THJ4 4388 aa11.06□□□□□ -0.64
PFDN4-201ENST00000371419 GAS8-AS1O95177 125 aa11.06□□□□□ -0.64
PFDN4-201ENST00000371419 MGPP08493 103 aa11.06□□□□□ -0.64
PFDN4-201ENST00000371419 RHOHQ15669 191 aa11.06□□□□□ -0.64
PFDN4-201ENST00000371419 Q6ZSN1 163 aa11.06□□□□□ -0.64
PFDN4-201ENST00000371419 UBE2DNLQ8IWF7 75 aa11.06□□□□□ -0.64
PFDN4-201ENST00000371419 PRO1933Q9H354 126 aa11.06□□□□□ -0.64
PFDN4-201ENST00000371419 KIF25-AS1Q9Y6Z4 181 aa11.06□□□□□ -0.64
PFDN4-201ENST00000371419 K7EMI3 77 aa11.05□□□□□ -0.64
PFDN4-201ENST00000371419 K7EQD1 137 aa11.05□□□□□ -0.64
PFDN4-201ENST00000371419 CCL18P55774 89 aa11.05□□□□□ -0.64
PFDN4-201ENST00000371419 IGLV2-18A0A075B6J9 118 aa11.04□□□□□ -0.64
PFDN4-201ENST00000371419 TRAV26-2A0A0B4J265 109 aa11.04□□□□□ -0.64
PFDN4-201ENST00000371419 LOC100131303A0A0U1RQF7 123 aa11.04□□□□□ -0.64
PFDN4-201ENST00000371419 FCER1GP30273 86 aa11.04□□□□□ -0.64
PFDN4-201ENST00000371419 SPATA12Q7Z6I5 190 aa11.04□□□□□ -0.64
PFDN4-201ENST00000371419 A0A096LNJ9 63 aa11.03□□□□□ -0.64
PFDN4-201ENST00000371419 LINC00587B1AMM8 73 aa11.03□□□□□ -0.64
PFDN4-201ENST00000371419 DDTP30046 118 aa11.03□□□□□ -0.64
PFDN4-201ENST00000371419 LINC00315P59091 139 aa11.03□□□□□ -0.64
PFDN4-201ENST00000371419 SUMO2P61956 95 aaKnown RBP11.03□□□□□ -0.64
PFDN4-201ENST00000371419 LINC00173Q6ZV60 143 aa11.03□□□□□ -0.64
PFDN4-201ENST00000371419 RPL32P62910 135 aaKnown RBP11.02□□□□□ -0.65
PFDN4-201ENST00000371419 LAGE3Q14657 143 aa11.02□□□□□ -0.65
PFDN4-201ENST00000371419 ZNF56Q15929 161 aa11.02□□□□□ -0.65
PFDN4-201ENST00000371419 ESRGQ1W209 222 aa11.02□□□□□ -0.65
PFDN4-201ENST00000371419 NEGR1Q7Z3B1 354 aa11.02□□□□□ -0.65
PFDN4-201ENST00000371419 SH2D6Q7Z4S9 175 aa11.02□□□□□ -0.65
PFDN4-201ENST00000371419 SMIM2Q9BVW6 85 aa11.02□□□□□ -0.65
PFDN4-201ENST00000371419 PAM16Q9Y3D7 125 aa11.01□□□□□ -0.65
PFDN4-201ENST00000371419 LINC00588Q9Y4M8 146 aa11.01□□□□□ -0.65
PFDN4-201ENST00000371419 F5H697 171 aa11□□□□□ -0.65
PFDN4-201ENST00000371419 ORMDL2Q53FV1 153 aa11□□□□□ -0.65
PFDN4-201ENST00000371419 TRAV9-2A0A087WT02 112 aa11□□□□□ -0.65
PFDN4-201ENST00000371419 LINC01545Q5VT33 79 aa11□□□□□ -0.65
PFDN4-201ENST00000371419 SUMO4Q6EEV6 95 aa11□□□□□ -0.65
PFDN4-201ENST00000371419 IFI27L1Q96BM0 104 aa11□□□□□ -0.65
PFDN4-201ENST00000371419 ST20Q9HBF5 79 aa11□□□□□ -0.65
PFDN4-201ENST00000371419 TRBV10-1A0A0K0K1A3 114 aa10.99□□□□□ -0.65
PFDN4-201ENST00000371419 GAGE12JA6NER3 117 aa10.99□□□□□ -0.65
PFDN4-201ENST00000371419 ATP5LO75964 103 aa10.99□□□□□ -0.65
PFDN4-201ENST00000371419 G0S2P27469 103 aa10.99□□□□□ -0.65
PFDN4-201ENST00000371419 GAGE1Q13065 139 aa10.99□□□□□ -0.65
PFDN4-201ENST00000371419 GAGE4Q13068 117 aa10.99□□□□□ -0.65
PFDN4-201ENST00000371419 GAGE5Q13069 117 aa10.99□□□□□ -0.65
PFDN4-201ENST00000371419 GAGE13Q4V321 117 aa10.99□□□□□ -0.65
PFDN4-201ENST00000371419 SPATA45Q537H7 98 aa10.99□□□□□ -0.65
PFDN4-201ENST00000371419 LYPD5Q6UWN5 251 aa10.99□□□□□ -0.65
PFDN4-201ENST00000371419 Q9UF83 564 aa10.99□□□□□ -0.65
PFDN4-201ENST00000371419 KMT2AQ03164 3969 aa10.98□□□□□ -0.65
PFDN4-201ENST00000371419 TRBV6-5A0A0K0K1A5 114 aa10.98□□□□□ -0.65
PFDN4-201ENST00000371419 RPL39LQ96EH5 51 aaKnown RBP10.98□□□□□ -0.65
PFDN4-201ENST00000371419 MRPS16Q9Y3D3 137 aaKnown RBP10.98□□□□□ -0.65
PFDN4-201ENST00000371419 H7C1H1 209 aa10.97□□□□□ -0.65
PFDN4-201ENST00000371419 LINC00694P0DN24 101 aa10.97□□□□□ -0.65
PFDN4-201ENST00000371419 ATP6V0E2Q8NHE4 81 aa10.97□□□□□ -0.65
PFDN4-201ENST00000371419 MIEN1Q9BRT3 115 aa10.97□□□□□ -0.65
PFDN4-201ENST00000371419 UPK3BQ9BT76 320 aa10.97□□□□□ -0.65
PFDN4-201ENST00000371419 RYR2Q92736 4967 aa10.96□□□□□ -0.65
PFDN4-201ENST00000371419 LINC01549A6NIU2 74 aa10.96□□□□□ -0.65
PFDN4-201ENST00000371419 HSBP1L1C9JCN9 74 aa10.96□□□□□ -0.65
PFDN4-201ENST00000371419 VCYO14598 125 aa10.96□□□□□ -0.65
PFDN4-201ENST00000371419 RPL36AP83881 106 aaKnown RBP10.96□□□□□ -0.65
PFDN4-201ENST00000371419 ATOH7Q8N100 152 aa10.96□□□□□ -0.65
PFDN4-201ENST00000371419 ZNRF2Q8NHG8 242 aa10.96□□□□□ -0.65
PFDN4-201ENST00000371419 RPL36ALQ969Q0 106 aaKnown RBP10.96□□□□□ -0.65
PFDN4-201ENST00000371419 DNAH6Q9C0G6 4158 aa10.95□□□□□ -0.66
PFDN4-201ENST00000371419 H0Y8G0 127 aa10.95□□□□□ -0.66
PFDN4-201ENST00000371419 TCAPO15273 167 aa10.95□□□□□ -0.66
PFDN4-201ENST00000371419 TIRAPP58753 221 aa10.95□□□□□ -0.66
PFDN4-201ENST00000371419 RYR3Q15413 4870 aa10.94□□□□□ -0.66
PFDN4-201ENST00000371419 TRBV7-3A0A075B6L6 115 aa10.94□□□□□ -0.66
PFDN4-201ENST00000371419 M0QY20 66 aa10.94□□□□□ -0.66
PFDN4-201ENST00000371419 POLR2KP53803 58 aaKnown RBP10.94□□□□□ -0.66
PFDN4-201ENST00000371419 GTSF1LQ9H1H1 148 aa10.94□□□□□ -0.66
PFDN4-201ENST00000371419 NEXN-AS1Q8NBZ9 246 aa10.93□□□□□ -0.66
PFDN4-201ENST00000371419 KIR2DL4Q99706 377 aa10.93□□□□□ -0.66
PFDN4-201ENST00000371419 Q9H8V8 135 aa10.93□□□□□ -0.66
PFDN4-201ENST00000371419 UQCR10Q9UDW1 63 aa10.93□□□□□ -0.66
PFDN4-201ENST00000371419 HYDINQ4G0P3 5121 aa10.93□□□□□ -0.66
PFDN4-201ENST00000371419 UBE2D3P61077 147 aa10.93□□□□□ -0.66
PFDN4-201ENST00000371419 UBE2D2P62837 147 aa10.93□□□□□ -0.66
PFDN4-201ENST00000371419 TRBV27A0A0K0K1C4 114 aa10.92□□□□□ -0.66
PFDN4-201ENST00000371419 SDHAF1A6NFY7 115 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms