RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 TOMM6Q96B49 74 aa6.63□□□□□ -1.35
THBS3-201ENST00000368378 U3KQE9 123 aa6.63□□□□□ -1.35
THBS3-201ENST00000368378 FHL3Q13643 280 aa6.62□□□□□ -1.35
THBS3-201ENST00000368378 CRYGDP07320 174 aa6.62□□□□□ -1.35
THBS3-201ENST00000368378 CRIP2P52943 208 aaPredicted RBP6.62□□□□□ -1.35
THBS3-201ENST00000368378 TRBV7-3A0A075B6L6 115 aa6.61□□□□□ -1.35
THBS3-201ENST00000368378 FAM223BA6NKX1 122 aa6.61□□□□□ -1.35
THBS3-201ENST00000368378 C9JAW5 83 aa6.61□□□□□ -1.35
THBS3-201ENST00000368378 F8W1H4 67 aa6.61□□□□□ -1.35
THBS3-201ENST00000368378 OVOL1O14753 267 aa6.61□□□□□ -1.35
THBS3-201ENST00000368378 NHLRC4P0CG21 123 aaPredicted RBP6.61□□□□□ -1.35
THBS3-201ENST00000368378 HERVK_113P61574 105 aa6.61□□□□□ -1.35
THBS3-201ENST00000368378 APRG1Q8IVJ8 170 aa6.61□□□□□ -1.35
THBS3-201ENST00000368378 FAM223AQ8IWN6 122 aa6.61□□□□□ -1.35
THBS3-201ENST00000368378 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.61□□□□□ -1.35
THBS3-201ENST00000368378 IGKV2-29A2NJV5 120 aaPredicted RBP6.61□□□□□ -1.35
THBS3-201ENST00000368378 LINC01546A6NGU7 62 aa6.61□□□□□ -1.35
THBS3-201ENST00000368378 DEFB112Q30KQ8 113 aa6.61□□□□□ -1.35
THBS3-201ENST00000368378 NFE4Q86UQ8 179 aa6.61□□□□□ -1.35
THBS3-201ENST00000368378 MRPL53Q96EL3 112 aaKnown RBP6.61□□□□□ -1.35
THBS3-201ENST00000368378 GAGE12JA6NER3 117 aa6.61□□□□□ -1.35
THBS3-201ENST00000368378 NDUFA4O00483 81 aa6.61□□□□□ -1.35
THBS3-201ENST00000368378 GAGE7O76087 117 aa6.61□□□□□ -1.35
THBS3-201ENST00000368378 TCL1BO95988 128 aa6.61□□□□□ -1.35
THBS3-201ENST00000368378 GAGE12FP0CL80 117 aa6.61□□□□□ -1.35
THBS3-201ENST00000368378 GAGE12GP0CL81 117 aa6.61□□□□□ -1.35
THBS3-201ENST00000368378 GAGE12IP0CL82 117 aa6.61□□□□□ -1.35
THBS3-201ENST00000368378 GAGE4Q13068 117 aa6.61□□□□□ -1.35
THBS3-201ENST00000368378 UBE2E2Q96LR5 201 aa6.61□□□□□ -1.35
THBS3-201ENST00000368378 HIGD1BQ9P298 99 aa6.61□□□□□ -1.35
THBS3-201ENST00000368378 LOC107984640A0A0U1RRK4 108 aa6.6□□□□□ -1.35
THBS3-201ENST00000368378 DEFB131AP59861 70 aa6.6□□□□□ -1.35
THBS3-201ENST00000368378 ZFAND6Q6FIF0 208 aa6.6□□□□□ -1.35
THBS3-201ENST00000368378 TINCRA0A1B0GVN0 87 aa6.6□□□□□ -1.35
THBS3-201ENST00000368378 J3QQQ9 107 aa6.6□□□□□ -1.35
THBS3-201ENST00000368378 CD28P10747 220 aa6.6□□□□□ -1.35
THBS3-201ENST00000368378 SLURP1P55000 103 aa6.6□□□□□ -1.35
THBS3-201ENST00000368378 PMVKQ15126 192 aa6.6□□□□□ -1.35
THBS3-201ENST00000368378 TEX29Q8N6K0 151 aa6.6□□□□□ -1.35
THBS3-201ENST00000368378 DLX4Q92988 240 aaPredicted RBP6.6□□□□□ -1.35
THBS3-201ENST00000368378 PKIGQ9Y2B9 76 aa6.59□□□□□ -1.35
THBS3-201ENST00000368378 FAM19A5Q7Z5A7 132 aaPredicted RBP6.59□□□□□ -1.35
THBS3-201ENST00000368378 IL17DQ8TAD2 202 aa6.59□□□□□ -1.35
THBS3-201ENST00000368378 IGLV4-69A0A075B6H9 119 aa6.59□□□□□ -1.36
THBS3-201ENST00000368378 IGHV4-4A0A075B6R2 117 aa6.59□□□□□ -1.36
THBS3-201ENST00000368378 RNF223E7ERA6 249 aa6.59□□□□□ -1.36
THBS3-201ENST00000368378 VCYO14598 125 aa6.59□□□□□ -1.36
THBS3-201ENST00000368378 SMCPP49901 116 aaPredicted RBP6.59□□□□□ -1.36
THBS3-201ENST00000368378 SNRPD3P62318 126 aaKnown RBP6.59□□□□□ -1.36
THBS3-201ENST00000368378 CFHR3Q02985 330 aa6.59□□□□□ -1.36
THBS3-201ENST00000368378 A0A0J9YY99 117 aa6.58□□□□□ -1.36
THBS3-201ENST00000368378 SOCS3O14543 225 aa6.58□□□□□ -1.36
THBS3-201ENST00000368378 MSMBP08118 114 aa6.58□□□□□ -1.36
THBS3-201ENST00000368378 CFC1BP0CG36 223 aa6.58□□□□□ -1.36
THBS3-201ENST00000368378 CFC1P0CG37 223 aa6.58□□□□□ -1.36
THBS3-201ENST00000368378 RPL35AP18077 110 aaKnown RBP6.58□□□□□ -1.36
THBS3-201ENST00000368378 MUSTN1Q8IVN3 82 aa6.58□□□□□ -1.36
THBS3-201ENST00000368378 IGHV4OR15-8A0A075B7B6 117 aa6.58□□□□□ -1.36
THBS3-201ENST00000368378 A0A087WW49 117 aa6.58□□□□□ -1.36
THBS3-201ENST00000368378 ELANEP08246 267 aa6.58□□□□□ -1.36
THBS3-201ENST00000368378 RETNQ9HD89 108 aa6.58□□□□□ -1.36
THBS3-201ENST00000368378 XCL2Q9UBD3 114 aa6.58□□□□□ -1.36
THBS3-201ENST00000368378 OTOGQ6ZRI0 2925 aa6.57□□□□□ -1.36
THBS3-201ENST00000368378 NDUFA7O95182 113 aa6.57□□□□□ -1.36
THBS3-201ENST00000368378 C19orf54Q5BKX5 351 aa6.57□□□□□ -1.36
THBS3-201ENST00000368378 NDUFA11Q86Y39 141 aa6.57□□□□□ -1.36
THBS3-201ENST00000368378 LENEPQ9Y5L5 61 aa6.57□□□□□ -1.36
THBS3-201ENST00000368378 IGHG2P01859 326 aa6.57□□□□□ -1.36
THBS3-201ENST00000368378 FOXI1Q12951 378 aa6.57□□□□□ -1.36
THBS3-201ENST00000368378 ANKRD29Q8N6D5 301 aa6.56□□□□□ -1.36
THBS3-201ENST00000368378 USMG5Q96IX5 58 aa6.56□□□□□ -1.36
THBS3-201ENST00000368378 HIVEP1P15822 2718 aa6.56□□□□□ -1.36
THBS3-201ENST00000368378 ZNF415Q09FC8 603 aa6.56□□□□□ -1.36
THBS3-201ENST00000368378 KLK9Q2XQG4 91 aa6.56□□□□□ -1.36
THBS3-201ENST00000368378 MEIG1Q5JSS6 88 aa6.56□□□□□ -1.36
THBS3-201ENST00000368378 DGAT2L7PQ6IED9 249 aa6.56□□□□□ -1.36
THBS3-201ENST00000368378 LINC01587Q99440 93 aa6.56□□□□□ -1.36
THBS3-201ENST00000368378 TRAV12-1A0A0B4J245 112 aa6.56□□□□□ -1.36
THBS3-201ENST00000368378 HOXD3P31249 432 aaPredicted RBP6.56□□□□□ -1.36
THBS3-201ENST00000368378 LINC00315P59091 139 aa6.56□□□□□ -1.36
THBS3-201ENST00000368378 C4orf26Q17RF5 130 aa6.56□□□□□ -1.36
THBS3-201ENST00000368378 DCANP1Q8TF63 244 aa6.56□□□□□ -1.36
THBS3-201ENST00000368378 IGHV1OR15-1A0A075B7D0 117 aa6.55□□□□□ -1.36
THBS3-201ENST00000368378 TRAV13-1A0A0B4J241 112 aa6.55□□□□□ -1.36
THBS3-201ENST00000368378 NTN5Q8WTR8 489 aaPredicted RBP6.55□□□□□ -1.36
THBS3-201ENST00000368378 CLEC2BQ92478 149 aa6.55□□□□□ -1.36
THBS3-201ENST00000368378 A6NDX4 124 aa6.55□□□□□ -1.36
THBS3-201ENST00000368378 IGIPA6NJ69 53 aa6.55□□□□□ -1.36
THBS3-201ENST00000368378 CYSRT1A8MQ03 144 aa6.55□□□□□ -1.36
THBS3-201ENST00000368378 A8MWV9 139 aa6.55□□□□□ -1.36
THBS3-201ENST00000368378 NDUFV3P56181 108 aaKnown RBP6.55□□□□□ -1.36
THBS3-201ENST00000368378 C10orf105Q8TEF2 133 aa6.55□□□□□ -1.36
THBS3-201ENST00000368378 DNAJC30Q96LL9 226 aa6.55□□□□□ -1.36
THBS3-201ENST00000368378 PRO1854Q9UHT4 67 aa6.55□□□□□ -1.36
THBS3-201ENST00000368378 RBMY1A1P0DJD3 496 aaKnown RBP6.54□□□□□ -1.36
THBS3-201ENST00000368378 RBMY1CP0DJD4 496 aa6.54□□□□□ -1.36
THBS3-201ENST00000368378 RBMY1FQ15415 496 aaKnown RBP6.54□□□□□ -1.36
THBS3-201ENST00000368378 TTC32Q5I0X7 151 aa6.54□□□□□ -1.36
THBS3-201ENST00000368378 PDZD2O15018 2839 aa6.54□□□□□ -1.36
THBS3-201ENST00000368378 TEX49A0A1B0GTD5 131 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms