RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 LOC100131303A0A0U1RQF7 123 aa12.89□□□□□ -0.35
LMNA-204ENST00000368298 TNFRSF6BO95407 300 aa12.89□□□□□ -0.35
LMNA-204ENST00000368298 C3orf79P0CE67 100 aa12.89□□□□□ -0.35
LMNA-204ENST00000368298 S100A12P80511 92 aa12.89□□□□□ -0.35
LMNA-204ENST00000368298 MRAP2Q96G30 205 aa12.89□□□□□ -0.35
LMNA-204ENST00000368298 UPK3BQ9BT76 320 aa12.89□□□□□ -0.35
LMNA-204ENST00000368298 LINC00315P59091 139 aa12.88□□□□□ -0.35
LMNA-204ENST00000368298 LYPD5Q6UWN5 251 aa12.88□□□□□ -0.35
LMNA-204ENST00000368298 C14orf178Q8N769 122 aaPredicted RBP12.88□□□□□ -0.35
LMNA-204ENST00000368298 MRPS16Q9Y3D3 137 aaKnown RBP12.88□□□□□ -0.35
LMNA-204ENST00000368298 MGPP08493 103 aa12.87□□□□□ -0.35
LMNA-204ENST00000368298 ZNRF2Q8NHG8 242 aa12.87□□□□□ -0.35
LMNA-204ENST00000368298 TRAV26-2A0A0B4J265 109 aa12.86□□□□□ -0.35
LMNA-204ENST00000368298 LINC00694P0DN24 101 aa12.86□□□□□ -0.35
LMNA-204ENST00000368298 TIRAPP58753 221 aa12.86□□□□□ -0.35
LMNA-204ENST00000368298 NRACQ8N912 160 aa12.86□□□□□ -0.35
LMNA-204ENST00000368298 Q8N976 141 aa12.86□□□□□ -0.35
LMNA-204ENST00000368298 TRBV10-1A0A0K0K1A3 114 aa12.85□□□□□ -0.35
LMNA-204ENST00000368298 LEPROTL1O95214 131 aa12.85□□□□□ -0.35
LMNA-204ENST00000368298 VPS13DQ5THJ4 4388 aa12.85□□□□□ -0.35
LMNA-204ENST00000368298 SMIM17P0DL12 118 aa12.85□□□□□ -0.35
LMNA-204ENST00000368298 BTF3P20290 206 aaKnown RBP12.85□□□□□ -0.35
LMNA-204ENST00000368298 LINC00173Q6ZV60 143 aa12.85□□□□□ -0.35
LMNA-204ENST00000368298 NXT2Q9NPJ8 142 aaKnown RBP12.85□□□□□ -0.35
LMNA-204ENST00000368298 Q9UF83 564 aa12.85□□□□□ -0.35
LMNA-204ENST00000368298 KMT2AQ03164 3969 aa12.84□□□□□ -0.35
LMNA-204ENST00000368298 TEX43Q6ZNM6 134 aa12.84□□□□□ -0.35
LMNA-204ENST00000368298 LINC01546A6NGU7 62 aa12.83□□□□□ -0.36
LMNA-204ENST00000368298 PKIAP61925 76 aa12.83□□□□□ -0.36
LMNA-204ENST00000368298 ZNF56Q15929 161 aa12.83□□□□□ -0.36
LMNA-204ENST00000368298 Q8N8P6 123 aa12.83□□□□□ -0.36
LMNA-204ENST00000368298 PRO1933Q9H354 126 aa12.83□□□□□ -0.36
LMNA-204ENST00000368298 Q9H8V8 135 aa12.83□□□□□ -0.36
LMNA-204ENST00000368298 HSPB8Q9UJY1 196 aa12.83□□□□□ -0.36
LMNA-204ENST00000368298 PRSS47A8MTI9 375 aa12.82□□□□□ -0.36
LMNA-204ENST00000368298 Q6ZR54 194 aa12.82□□□□□ -0.36
LMNA-204ENST00000368298 ZNF664Q8N3J9 261 aa12.82□□□□□ -0.36
LMNA-204ENST00000368298 ATP6V0E2Q8NHE4 81 aa12.82□□□□□ -0.36
LMNA-204ENST00000368298 TMEM70Q9BUB7 260 aa12.82□□□□□ -0.36
LMNA-204ENST00000368298 IGLV2-18A0A075B6J9 118 aa12.81□□□□□ -0.36
LMNA-204ENST00000368298 A0A096LNJ9 63 aa12.81□□□□□ -0.36
LMNA-204ENST00000368298 GAGE12JA6NER3 117 aa12.81□□□□□ -0.36
LMNA-204ENST00000368298 GAGE1Q13065 139 aa12.81□□□□□ -0.36
LMNA-204ENST00000368298 GAGE4Q13068 117 aa12.81□□□□□ -0.36
LMNA-204ENST00000368298 GAGE5Q13069 117 aa12.81□□□□□ -0.36
LMNA-204ENST00000368298 GAGE13Q4V321 117 aa12.81□□□□□ -0.36
LMNA-204ENST00000368298 F5H697 171 aa12.8□□□□□ -0.36
LMNA-204ENST00000368298 TSTD3H0UI37 97 aa12.8□□□□□ -0.36
LMNA-204ENST00000368298 HBDP02042 147 aa12.8□□□□□ -0.36
LMNA-204ENST00000368298 GTSF1LQ9H1H1 148 aa12.8□□□□□ -0.36
LMNA-204ENST00000368298 TRBV7-3A0A075B6L6 115 aa12.79□□□□□ -0.36
LMNA-204ENST00000368298 M0QY20 66 aa12.79□□□□□ -0.36
LMNA-204ENST00000368298 RPL36AP83881 106 aaKnown RBP12.79□□□□□ -0.36
LMNA-204ENST00000368298 RPL36ALQ969Q0 106 aaKnown RBP12.79□□□□□ -0.36
LMNA-204ENST00000368298 MAP1LC3CQ9BXW4 147 aa12.79□□□□□ -0.36
LMNA-204ENST00000368298 SYS1-DBNDD2H3BUS1 97 aa12.78□□□□□ -0.36
LMNA-204ENST00000368298 SPATA12Q7Z6I5 190 aa12.78□□□□□ -0.36
LMNA-204ENST00000368298 NEXN-AS1Q8NBZ9 246 aa12.78□□□□□ -0.36
LMNA-204ENST00000368298 RPL39LQ96EH5 51 aaKnown RBP12.78□□□□□ -0.36
LMNA-204ENST00000368298 VAMP8Q9BV40 100 aa12.78□□□□□ -0.36
LMNA-204ENST00000368298 H7C1H1 209 aa12.78□□□□□ -0.36
LMNA-204ENST00000368298 PPP1R17O96001 155 aa12.78□□□□□ -0.36
LMNA-204ENST00000368298 UBE2D3P61077 147 aa12.78□□□□□ -0.36
LMNA-204ENST00000368298 UBE2D2P62837 147 aa12.78□□□□□ -0.36
LMNA-204ENST00000368298 SUMO4Q6EEV6 95 aa12.78□□□□□ -0.36
LMNA-204ENST00000368298 C20orf78Q9BR46 151 aa12.78□□□□□ -0.36
LMNA-204ENST00000368298 SMIM2Q9BVW6 85 aa12.78□□□□□ -0.36
LMNA-204ENST00000368298 EPPK1P58107 5090 aaKnown RBP12.77□□□□□ -0.36
LMNA-204ENST00000368298 DNAH6Q9C0G6 4158 aa12.77□□□□□ -0.37
LMNA-204ENST00000368298 NBDYA0A0U1RRE5 68 aa12.77□□□□□ -0.37
LMNA-204ENST00000368298 LINC00587B1AMM8 73 aa12.77□□□□□ -0.37
LMNA-204ENST00000368298 SIVA1O15304 175 aa12.77□□□□□ -0.37
LMNA-204ENST00000368298 FCER1GP30273 86 aa12.77□□□□□ -0.37
LMNA-204ENST00000368298 PET117Q6UWS5 81 aa12.77□□□□□ -0.37
LMNA-204ENST00000368298 C20orf202A1L168 122 aa12.76□□□□□ -0.37
LMNA-204ENST00000368298 SUMO2P61956 95 aaKnown RBP12.76□□□□□ -0.37
LMNA-204ENST00000368298 LELP1Q5T871 98 aa12.76□□□□□ -0.37
LMNA-204ENST00000368298 DNAJC30Q96LL9 226 aa12.76□□□□□ -0.37
LMNA-204ENST00000368298 LAGE3Q14657 143 aa12.75□□□□□ -0.37
LMNA-204ENST00000368298 PAM16Q9Y3D7 125 aa12.75□□□□□ -0.37
LMNA-204ENST00000368298 M0R2N4 97 aa12.74□□□□□ -0.37
LMNA-204ENST00000368298 TCAPO15273 167 aa12.74□□□□□ -0.37
LMNA-204ENST00000368298 TTC32Q5I0X7 151 aa12.74□□□□□ -0.37
LMNA-204ENST00000368298 ATOH7Q8N100 152 aa12.74□□□□□ -0.37
LMNA-204ENST00000368298 H0Y8G0 127 aa12.73□□□□□ -0.37
LMNA-204ENST00000368298 K7EP13 123 aa12.73□□□□□ -0.37
LMNA-204ENST00000368298 DNAH10OSP0CZ25 163 aa12.73□□□□□ -0.37
LMNA-204ENST00000368298 WFDC10BQ8IUB3 73 aa12.73□□□□□ -0.37
LMNA-204ENST00000368298 TRAV8-6A0A0B4J262 113 aa12.72□□□□□ -0.37
LMNA-204ENST00000368298 IFI27L1Q96BM0 104 aa12.72□□□□□ -0.37
LMNA-204ENST00000368298 ST20Q9HBF5 79 aa12.72□□□□□ -0.37
LMNA-204ENST00000368298 DDTP30046 118 aa12.72□□□□□ -0.37
LMNA-204ENST00000368298 RPL32P62910 135 aaKnown RBP12.72□□□□□ -0.37
LMNA-204ENST00000368298 SPATA45Q537H7 98 aa12.72□□□□□ -0.37
LMNA-204ENST00000368298 LINC01545Q5VT33 79 aa12.72□□□□□ -0.37
LMNA-204ENST00000368298 DAZ4Q86SG3 579 aaKnown RBP12.72□□□□□ -0.37
LMNA-204ENST00000368298 DAZ3Q9NR90 486 aaKnown RBP12.72□□□□□ -0.37
LMNA-204ENST00000368298 TNFRSF18Q9Y5U5 241 aa12.72□□□□□ -0.37
LMNA-204ENST00000368298 KRTAP1-5Q9BYS1 174 aa12.71□□□□□ -0.38
LMNA-204ENST00000368298 IGHV3-38A0A0C4DH36 116 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms