RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 ICOSQ9Y6W8 199 aa5.6□□□□□ -1.51
MRPL55-211ENST00000366738 TRBV7-3A0A075B6L6 115 aa5.59□□□□□ -1.51
MRPL55-211ENST00000366738 H3BNG1 76 aa5.59□□□□□ -1.51
MRPL55-211ENST00000366738 H7C1H1 209 aa5.59□□□□□ -1.51
MRPL55-211ENST00000366738 PHOX2AO14813 284 aa5.59□□□□□ -1.51
MRPL55-211ENST00000366738 TNFRSF6BO95407 300 aa5.59□□□□□ -1.51
MRPL55-211ENST00000366738 TRGC2P03986 189 aa5.59□□□□□ -1.51
MRPL55-211ENST00000366738 SRIP30626 198 aa5.59□□□□□ -1.51
MRPL55-211ENST00000366738 RPL36AP83881 106 aaKnown RBP5.59□□□□□ -1.51
MRPL55-211ENST00000366738 COX19Q49B96 90 aa5.59□□□□□ -1.51
MRPL55-211ENST00000366738 Q5VSD8 79 aa5.59□□□□□ -1.51
MRPL55-211ENST00000366738 ORMDL3Q8N138 153 aa5.59□□□□□ -1.51
MRPL55-211ENST00000366738 RPL36ALQ969Q0 106 aaKnown RBP5.59□□□□□ -1.51
MRPL55-211ENST00000366738 NIT2Q9NQR4 276 aa5.59□□□□□ -1.51
MRPL55-211ENST00000366738 HMCN2Q8NDA2 5059 aa5.58□□□□□ -1.52
MRPL55-211ENST00000366738 TRBV6-5A0A0K0K1A5 114 aa5.58□□□□□ -1.52
MRPL55-211ENST00000366738 SDHAF1A6NFY7 115 aa5.58□□□□□ -1.52
MRPL55-211ENST00000366738 IQCJQ1A5X6 159 aa5.58□□□□□ -1.52
MRPL55-211ENST00000366738 DNAJC30Q96LL9 226 aa5.58□□□□□ -1.52
MRPL55-211ENST00000366738 PRELID3AQ96N28 172 aa5.58□□□□□ -1.52
MRPL55-211ENST00000366738 ALKBH7Q9BT30 221 aaPredicted RBP5.58□□□□□ -1.52
MRPL55-211ENST00000366738 TNFRSF18Q9Y5U5 241 aa5.58□□□□□ -1.52
MRPL55-211ENST00000366738 PPBPP02775 128 aa5.57□□□□□ -1.52
MRPL55-211ENST00000366738 SUMO2P61956 95 aaKnown RBP5.57□□□□□ -1.52
MRPL55-211ENST00000366738 MRPL23Q16540 153 aaKnown RBP5.57□□□□□ -1.52
MRPL55-211ENST00000366738 ESRGQ1W209 222 aa5.57□□□□□ -1.52
MRPL55-211ENST00000366738 NTM-AS1Q6ZSK4 140 aa5.57□□□□□ -1.52
MRPL55-211ENST00000366738 ATP6V0E2Q8NHE4 81 aa5.57□□□□□ -1.52
MRPL55-211ENST00000366738 TMEM70Q9BUB7 260 aa5.57□□□□□ -1.52
MRPL55-211ENST00000366738 ST20Q9HBF5 79 aa5.57□□□□□ -1.52
MRPL55-211ENST00000366738 LOC389332A0A1B0GUA5 103 aa5.56□□□□□ -1.52
MRPL55-211ENST00000366738 TSHBP01222 138 aa5.56□□□□□ -1.52
MRPL55-211ENST00000366738 FUSP35637 526 aaKnown RBP eCLIP5.56□□□□□ -1.52
MRPL55-211ENST00000366738 POLR2KP53803 58 aaKnown RBP5.56□□□□□ -1.52
MRPL55-211ENST00000366738 LYPD5Q6UWN5 251 aa5.56□□□□□ -1.52
MRPL55-211ENST00000366738 SMIM2Q9BVW6 85 aa5.56□□□□□ -1.52
MRPL55-211ENST00000366738 TRBV27A0A0K0K1C4 114 aa5.55□□□□□ -1.52
MRPL55-211ENST00000366738 TCAPO15273 167 aa5.55□□□□□ -1.52
MRPL55-211ENST00000366738 IFI27P40305 119 aaPredicted RBP5.55□□□□□ -1.52
MRPL55-211ENST00000366738 CCL18P55774 89 aa5.55□□□□□ -1.52
MRPL55-211ENST00000366738 DAZ4Q86SG3 579 aaKnown RBP5.55□□□□□ -1.52
MRPL55-211ENST00000366738 C18orf32Q8TCD1 76 aa5.55□□□□□ -1.52
MRPL55-211ENST00000366738 URB1-AS1Q96HZ7 61 aa5.55□□□□□ -1.52
MRPL55-211ENST00000366738 C20orf78Q9BR46 151 aa5.55□□□□□ -1.52
MRPL55-211ENST00000366738 GTSF1LQ9H1H1 148 aa5.55□□□□□ -1.52
MRPL55-211ENST00000366738 MAP1LC3AQ9H492 121 aa5.55□□□□□ -1.52
MRPL55-211ENST00000366738 Q9H8V8 135 aa5.55□□□□□ -1.52
MRPL55-211ENST00000366738 DAZ3Q9NR90 486 aaKnown RBP5.55□□□□□ -1.52
MRPL55-211ENST00000366738 LAMTOR2Q9Y2Q5 125 aa5.55□□□□□ -1.52
MRPL55-211ENST00000366738 DNAH8Q96JB1 4490 aa5.55□□□□□ -1.52
MRPL55-211ENST00000366738 PRSS47A8MTI9 375 aa5.54□□□□□ -1.52
MRPL55-211ENST00000366738 I3L3M4 83 aa5.54□□□□□ -1.52
MRPL55-211ENST00000366738 PPP1R17O96001 155 aa5.54□□□□□ -1.52
MRPL55-211ENST00000366738 XGP55808 180 aa5.54□□□□□ -1.52
MRPL55-211ENST00000366738 RPL32P62910 135 aaKnown RBP5.54□□□□□ -1.52
MRPL55-211ENST00000366738 SH2D6Q7Z4S9 175 aa5.54□□□□□ -1.52
MRPL55-211ENST00000366738 WFDC10BQ8IUB3 73 aa5.54□□□□□ -1.52
MRPL55-211ENST00000366738 Q8N3U1 123 aa5.54□□□□□ -1.52
MRPL55-211ENST00000366738 CHCHD7Q9BUK0 85 aa5.54□□□□□ -1.52
MRPL55-211ENST00000366738 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.53□□□□□ -1.52
MRPL55-211ENST00000366738 TRBV6-8A0A0A6YYG3 113 aa5.53□□□□□ -1.52
MRPL55-211ENST00000366738 IGKV2-29A2NJV5 120 aaPredicted RBP5.53□□□□□ -1.52
MRPL55-211ENST00000366738 J3QL48 77 aa5.53□□□□□ -1.52
MRPL55-211ENST00000366738 VCYO14598 125 aa5.53□□□□□ -1.52
MRPL55-211ENST00000366738 SMR3BP02814 79 aaPredicted RBP5.53□□□□□ -1.52
MRPL55-211ENST00000366738 PMCHP20382 165 aa5.53□□□□□ -1.52
MRPL55-211ENST00000366738 TIRAPP58753 221 aa5.53□□□□□ -1.52
MRPL55-211ENST00000366738 LINC00310P59036 64 aa5.53□□□□□ -1.52
MRPL55-211ENST00000366738 COTL1Q14019 142 aa5.53□□□□□ -1.52
MRPL55-211ENST00000366738 LELP1Q5T871 98 aa5.53□□□□□ -1.52
MRPL55-211ENST00000366738 Q8N8P6 123 aa5.53□□□□□ -1.52
MRPL55-211ENST00000366738 MRPS16Q9Y3D3 137 aaKnown RBP5.53□□□□□ -1.52
MRPL55-211ENST00000366738 IGHV1-24A0A0C4DH33 117 aa5.52□□□□□ -1.53
MRPL55-211ENST00000366738 HIST1H2BKO60814 126 aa5.52□□□□□ -1.53
MRPL55-211ENST00000366738 HIST1H2BJP06899 126 aa5.52□□□□□ -1.53
MRPL55-211ENST00000366738 HIST1H2BOP23527 126 aa5.52□□□□□ -1.53
MRPL55-211ENST00000366738 HIST1H2BBP33778 126 aa5.52□□□□□ -1.53
MRPL55-211ENST00000366738 AMTP48728 403 aa5.52□□□□□ -1.53
MRPL55-211ENST00000366738 HIST1H2BDP58876 126 aa5.52□□□□□ -1.53
MRPL55-211ENST00000366738 HIST1H2BCP62807 126 aa5.52□□□□□ -1.53
MRPL55-211ENST00000366738 HIST2H2BEQ16778 126 aa5.52□□□□□ -1.53
MRPL55-211ENST00000366738 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.52□□□□□ -1.53
MRPL55-211ENST00000366738 Q6ZRN7 208 aaPredicted RBP5.52□□□□□ -1.53
MRPL55-211ENST00000366738 HIST1H2BHQ93079 126 aa5.52□□□□□ -1.53
MRPL55-211ENST00000366738 KIR2DL4Q99706 377 aa5.52□□□□□ -1.53
MRPL55-211ENST00000366738 HIST1H2BNQ99877 126 aa5.52□□□□□ -1.53
MRPL55-211ENST00000366738 HIST1H2BMQ99879 126 aa5.52□□□□□ -1.53
MRPL55-211ENST00000366738 UPK3BQ9BT76 320 aa5.52□□□□□ -1.53
MRPL55-211ENST00000366738 TRBV25-1A0A075B6N4 114 aa5.51□□□□□ -1.53
MRPL55-211ENST00000366738 LINC01546A6NGU7 62 aa5.51□□□□□ -1.53
MRPL55-211ENST00000366738 ESDP10768 282 aa5.51□□□□□ -1.53
MRPL55-211ENST00000366738 BTF3P20290 206 aaKnown RBP5.51□□□□□ -1.53
MRPL55-211ENST00000366738 FCER1GP30273 86 aa5.51□□□□□ -1.53
MRPL55-211ENST00000366738 RPL39P62891 51 aaKnown RBP5.51□□□□□ -1.53
MRPL55-211ENST00000366738 GAGE6Q13070 117 aa5.51□□□□□ -1.53
MRPL55-211ENST00000366738 RNASEKQ6P5S7 137 aaKnown RBP5.51□□□□□ -1.53
MRPL55-211ENST00000366738 PRSS3P2Q8NHM4 247 aa5.51□□□□□ -1.53
MRPL55-211ENST00000366738 TMEM243Q9BU79 118 aa5.51□□□□□ -1.53
MRPL55-211ENST00000366738 NXT2Q9NPJ8 142 aaKnown RBP5.51□□□□□ -1.53
MRPL55-211ENST00000366738 A0A096LNJ9 63 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms