RNA–Protein interactions for RNA: ENST00000361168.9

CLK2-202, Transcript of CDC like kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLK2, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-202ENST00000361168 COTL1Q14019 142 aa12.15□□□□□ -0.46
CLK2-202ENST00000361168 ALKBH7Q9BT30 221 aaPredicted RBP12.15□□□□□ -0.46
CLK2-202ENST00000361168 MT-ND6P03923 174 aa12.15□□□□□ -0.46
CLK2-202ENST00000361168 C20orf78Q9BR46 151 aa12.15□□□□□ -0.46
CLK2-202ENST00000361168 TRAV8-6A0A0B4J262 113 aa12.14□□□□□ -0.47
CLK2-202ENST00000361168 TCAPO15273 167 aa12.14□□□□□ -0.47
CLK2-202ENST00000361168 PPP1R17O96001 155 aa12.14□□□□□ -0.47
CLK2-202ENST00000361168 IQCJQ1A5X6 159 aa12.14□□□□□ -0.47
CLK2-202ENST00000361168 NIT1Q86X76 327 aa12.14□□□□□ -0.47
CLK2-202ENST00000361168 Q8N976 141 aa12.14□□□□□ -0.47
CLK2-202ENST00000361168 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.14□□□□□ -0.47
CLK2-202ENST00000361168 CHCHD5Q9BSY4 110 aa12.14□□□□□ -0.47
CLK2-202ENST00000361168 SMIM2Q9BVW6 85 aa12.14□□□□□ -0.47
CLK2-202ENST00000361168 TRBV25-1A0A075B6N4 114 aa12.13□□□□□ -0.47
CLK2-202ENST00000361168 VCYO14598 125 aa12.13□□□□□ -0.47
CLK2-202ENST00000361168 GAGE6Q13070 117 aa12.13□□□□□ -0.47
CLK2-202ENST00000361168 COX19Q49B96 90 aa12.13□□□□□ -0.47
CLK2-202ENST00000361168 CHCHD7Q9BUK0 85 aa12.13□□□□□ -0.47
CLK2-202ENST00000361168 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.13□□□□□ -0.47
CLK2-202ENST00000361168 IGHV1-24A0A0C4DH33 117 aa12.13□□□□□ -0.47
CLK2-202ENST00000361168 IGKV2-29A2NJV5 120 aaPredicted RBP12.13□□□□□ -0.47
CLK2-202ENST00000361168 DNAH10OSP0CZ25 163 aa12.13□□□□□ -0.47
CLK2-202ENST00000361168 AMTP48728 403 aa12.13□□□□□ -0.47
CLK2-202ENST00000361168 MPV17L2Q567V2 206 aa12.13□□□□□ -0.47
CLK2-202ENST00000361168 NBDYA0A0U1RRE5 68 aa12.12□□□□□ -0.47
CLK2-202ENST00000361168 TMEM262E9PQX1 116 aa12.12□□□□□ -0.47
CLK2-202ENST00000361168 PHOX2AO14813 284 aa12.12□□□□□ -0.47
CLK2-202ENST00000361168 TRGC2P03986 189 aa12.11□□□□□ -0.47
CLK2-202ENST00000361168 IFI27P40305 119 aaPredicted RBP12.11□□□□□ -0.47
CLK2-202ENST00000361168 Q6ZR54 194 aa12.11□□□□□ -0.47
CLK2-202ENST00000361168 RAB5AP20339 215 aa12.11□□□□□ -0.47
CLK2-202ENST00000361168 FAT2Q9NYQ8 4349 aa12.1□□□□□ -0.47
CLK2-202ENST00000361168 LINC01556Q5JQF7 62 aa12.1□□□□□ -0.47
CLK2-202ENST00000361168 TMEM243Q9BU79 118 aa12.1□□□□□ -0.47
CLK2-202ENST00000361168 MAP1LC3AQ9H492 121 aa12.1□□□□□ -0.47
CLK2-202ENST00000361168 LAMTOR2Q9Y2Q5 125 aa12.1□□□□□ -0.47
CLK2-202ENST00000361168 ESDP10768 282 aa12.09□□□□□ -0.47
CLK2-202ENST00000361168 KIR2DL4Q99706 377 aa12.09□□□□□ -0.47
CLK2-202ENST00000361168 PRSS47A8MTI9 375 aa12.09□□□□□ -0.47
CLK2-202ENST00000361168 FCER1GP30273 86 aa12.09□□□□□ -0.47
CLK2-202ENST00000361168 RPL32P62910 135 aaKnown RBP12.09□□□□□ -0.47
CLK2-202ENST00000361168 TMEM97Q5BJF2 176 aa12.09□□□□□ -0.47
CLK2-202ENST00000361168 IGLV4-60A0A075B6I1 120 aa12.08□□□□□ -0.48
CLK2-202ENST00000361168 A0A087WX48 190 aa12.07□□□□□ -0.48
CLK2-202ENST00000361168 RBX1P62877 108 aa12.07□□□□□ -0.48
CLK2-202ENST00000361168 RPL39P62891 51 aaKnown RBP12.07□□□□□ -0.48
CLK2-202ENST00000361168 C18orf32Q8TCD1 76 aa12.07□□□□□ -0.48
CLK2-202ENST00000361168 KLK12Q9UKR0 248 aa12.07□□□□□ -0.48
CLK2-202ENST00000361168 DNAH17Q9UFH2 4485 aa12.07□□□□□ -0.48
CLK2-202ENST00000361168 Q8N8P6 123 aa12.06□□□□□ -0.48
CLK2-202ENST00000361168 URB1-AS1Q96HZ7 61 aa12.06□□□□□ -0.48
CLK2-202ENST00000361168 UBE2L6O14933 153 aa12.05□□□□□ -0.48
CLK2-202ENST00000361168 FGF6P10767 208 aa12.05□□□□□ -0.48
CLK2-202ENST00000361168 CLPSL2Q6UWE3 100 aa12.05□□□□□ -0.48
CLK2-202ENST00000361168 C20orf203Q8NBC4 194 aa12.05□□□□□ -0.48
CLK2-202ENST00000361168 PRSS3P2Q8NHM4 247 aa12.04□□□□□ -0.48
CLK2-202ENST00000361168 ANGP03950 147 aaKnown RBP12.03□□□□□ -0.48
CLK2-202ENST00000361168 Q9HAA7 133 aa12.03□□□□□ -0.48
CLK2-202ENST00000361168 RNASEKQ6P5S7 137 aaKnown RBP12.03□□□□□ -0.48
CLK2-202ENST00000361168 NXT2Q9NPJ8 142 aaKnown RBP12.02□□□□□ -0.49
CLK2-202ENST00000361168 IBA57-AS1B1ANH7 110 aa12.01□□□□□ -0.49
CLK2-202ENST00000361168 ENHOQ6UWT2 76 aa12.01□□□□□ -0.49
CLK2-202ENST00000361168 LINC00269Q8N2A0 174 aa12.01□□□□□ -0.49
CLK2-202ENST00000361168 OPRPNQ99935 248 aaPredicted RBP12.01□□□□□ -0.49
CLK2-202ENST00000361168 RNASE13Q5GAN3 156 aaKnown RBP12.01□□□□□ -0.49
CLK2-202ENST00000361168 TTC32Q5I0X7 151 aa12.01□□□□□ -0.49
CLK2-202ENST00000361168 FAM104AQ969W3 186 aa12.01□□□□□ -0.49
CLK2-202ENST00000361168 UBE2D4Q9Y2X8 147 aa12.01□□□□□ -0.49
CLK2-202ENST00000361168 TRAV9-2A0A087WT02 112 aa12□□□□□ -0.49
CLK2-202ENST00000361168 A0A1B0GUV1 79 aa12□□□□□ -0.49
CLK2-202ENST00000361168 RTL8CO15255 209 aa12□□□□□ -0.49
CLK2-202ENST00000361168 LAGE3Q14657 143 aa12□□□□□ -0.49
CLK2-202ENST00000361168 AMMECR1LQ6DCA0 310 aa12□□□□□ -0.49
CLK2-202ENST00000361168 UBE2WQ96B02 151 aa12□□□□□ -0.49
CLK2-202ENST00000361168 PMCHL1Q16048 86 aa11.99□□□□□ -0.49
CLK2-202ENST00000361168 PKD1P98161 4303 aa11.98□□□□□ -0.49
CLK2-202ENST00000361168 BTF3P20290 206 aaKnown RBP11.98□□□□□ -0.49
CLK2-202ENST00000361168 C6orf223Q8N319 242 aa11.98□□□□□ -0.49
CLK2-202ENST00000361168 C10orf126Q8N4M7 172 aa11.98□□□□□ -0.49
CLK2-202ENST00000361168 IGKV3OR2-268A0A0C4DH90 116 aa11.98□□□□□ -0.49
CLK2-202ENST00000361168 LINC01546A6NGU7 62 aa11.98□□□□□ -0.49
CLK2-202ENST00000361168 C1orf134Q5TEV5 83 aa11.98□□□□□ -0.49
CLK2-202ENST00000361168 C2orf66Q6UXQ4 117 aa11.98□□□□□ -0.49
CLK2-202ENST00000361168 Q6ZRN7 208 aaPredicted RBP11.98□□□□□ -0.49
CLK2-202ENST00000361168 MRPL52Q86TS9 123 aaKnown RBP11.98□□□□□ -0.49
CLK2-202ENST00000361168 H7C423 109 aa11.97□□□□□ -0.49
CLK2-202ENST00000361168 LINC00614P0C842 121 aa11.97□□□□□ -0.49
CLK2-202ENST00000361168 FA2HQ7L5A8 372 aa11.97□□□□□ -0.49
CLK2-202ENST00000361168 CDC42SE2Q9NRR3 84 aa11.97□□□□□ -0.49
CLK2-202ENST00000361168 PRR34Q9NV39 138 aa11.97□□□□□ -0.49
CLK2-202ENST00000361168 DNAH11Q96DT5 4516 aa11.96□□□□□ -0.49
CLK2-202ENST00000361168 IGLV10-54A0A075B6I4 117 aa11.96□□□□□ -0.49
CLK2-202ENST00000361168 A0A096LNJ9 63 aa11.96□□□□□ -0.49
CLK2-202ENST00000361168 LINC00310P59036 64 aa11.96□□□□□ -0.49
CLK2-202ENST00000361168 REG3AQ06141 175 aa11.96□□□□□ -0.49
CLK2-202ENST00000361168 ORMDL2Q53FV1 153 aa11.96□□□□□ -0.49
CLK2-202ENST00000361168 Q6ZUT4 128 aa11.96□□□□□ -0.49
CLK2-202ENST00000361168 K7EP13 123 aa11.96□□□□□ -0.5
CLK2-202ENST00000361168 OR5A1Q8NGJ0 315 aa11.96□□□□□ -0.5
CLK2-202ENST00000361168 AP5S1Q9NUS5 200 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms