RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 DEFB131AP59861 70 aa10.2□□□□□ -0.78
CSNK1E-201ENST00000359867 DEFB104AQ8WTQ1 72 aa10.2□□□□□ -0.78
CSNK1E-201ENST00000359867 DPH3P1Q9H4G8 78 aa10.2□□□□□ -0.78
CSNK1E-201ENST00000359867 GAGE12JA6NER3 117 aa10.19□□□□□ -0.78
CSNK1E-201ENST00000359867 M0R381 172 aa10.19□□□□□ -0.78
CSNK1E-201ENST00000359867 ATP5LO75964 103 aa10.19□□□□□ -0.78
CSNK1E-201ENST00000359867 GAGE7O76087 117 aa10.19□□□□□ -0.78
CSNK1E-201ENST00000359867 IGKV3-20P01619 116 aa10.19□□□□□ -0.78
CSNK1E-201ENST00000359867 GAGE12FP0CL80 117 aa10.19□□□□□ -0.78
CSNK1E-201ENST00000359867 GAGE12GP0CL81 117 aa10.19□□□□□ -0.78
CSNK1E-201ENST00000359867 GAGE12IP0CL82 117 aa10.19□□□□□ -0.78
CSNK1E-201ENST00000359867 HLA-DRB4P13762 266 aa10.19□□□□□ -0.78
CSNK1E-201ENST00000359867 GAGE4Q13068 117 aa10.19□□□□□ -0.78
CSNK1E-201ENST00000359867 C12orf74Q32Q52 190 aa10.19□□□□□ -0.78
CSNK1E-201ENST00000359867 HIGD1BQ9P298 99 aa10.19□□□□□ -0.78
CSNK1E-201ENST00000359867 HLA-DRB4X5D2U9 266 aa10.19□□□□□ -0.78
CSNK1E-201ENST00000359867 ANK2Q01484 3957 aa10.19□□□□□ -0.78
CSNK1E-201ENST00000359867 CD7P09564 240 aa10.18□□□□□ -0.78
CSNK1E-201ENST00000359867 SPINK13Q1W4C9 94 aa10.18□□□□□ -0.78
CSNK1E-201ENST00000359867 H3BMM0 161 aa10.18□□□□□ -0.78
CSNK1E-201ENST00000359867 CFAP126Q5VTH2 177 aa10.18□□□□□ -0.78
CSNK1E-201ENST00000359867 IGHV1OR15-1A0A075B7D0 117 aa10.17□□□□□ -0.78
CSNK1E-201ENST00000359867 TRAV12-2A0A075B6T6 113 aa10.17□□□□□ -0.78
CSNK1E-201ENST00000359867 KNCNA6PVL3 124 aa10.17□□□□□ -0.78
CSNK1E-201ENST00000359867 POM121L12Q8N7R1 296 aa10.17□□□□□ -0.78
CSNK1E-201ENST00000359867 C9orf85Q96MD7 179 aa10.17□□□□□ -0.78
CSNK1E-201ENST00000359867 HIST1H4GQ99525 98 aa10.17□□□□□ -0.78
CSNK1E-201ENST00000359867 MAP6D1Q9H9H5 199 aa10.17□□□□□ -0.78
CSNK1E-201ENST00000359867 IGHV3-16A0A0C4DH30 117 aa10.16□□□□□ -0.78
CSNK1E-201ENST00000359867 NDUFV3P56181 108 aaKnown RBP10.16□□□□□ -0.78
CSNK1E-201ENST00000359867 RRN3P1Q2M238 152 aa10.16□□□□□ -0.78
CSNK1E-201ENST00000359867 C14orf178Q8N769 122 aaPredicted RBP10.16□□□□□ -0.78
CSNK1E-201ENST00000359867 ATP6V0E2Q8NHE4 81 aa10.16□□□□□ -0.78
CSNK1E-201ENST00000359867 RPL39LQ96EH5 51 aaKnown RBP10.16□□□□□ -0.78
CSNK1E-201ENST00000359867 ZNF256Q9Y2P7 627 aaPredicted RBP10.16□□□□□ -0.78
CSNK1E-201ENST00000359867 SFTA2Q6UW10 78 aa10.15□□□□□ -0.78
CSNK1E-201ENST00000359867 PPP1R17O96001 155 aa10.15□□□□□ -0.79
CSNK1E-201ENST00000359867 TRGV11A0A075B6L2 103 aa10.14□□□□□ -0.79
CSNK1E-201ENST00000359867 MGPP08493 103 aa10.14□□□□□ -0.79
CSNK1E-201ENST00000359867 Q8N1Y9 231 aa10.14□□□□□ -0.79
CSNK1E-201ENST00000359867 IGLV1-51P01701 117 aa10.14□□□□□ -0.79
CSNK1E-201ENST00000359867 SMIM2Q9BVW6 85 aa10.14□□□□□ -0.79
CSNK1E-201ENST00000359867 KIF25-AS1Q9Y6Z4 181 aa10.14□□□□□ -0.79
CSNK1E-201ENST00000359867 RHODO00212 210 aa10.13□□□□□ -0.79
CSNK1E-201ENST00000359867 SCGB3A1Q96QR1 104 aa10.13□□□□□ -0.79
CSNK1E-201ENST00000359867 CMYA5Q8N3K9 4069 aa10.13□□□□□ -0.79
CSNK1E-201ENST00000359867 TRAV4A0A0B4J268 109 aa10.12□□□□□ -0.79
CSNK1E-201ENST00000359867 CMC4P56277 68 aaPredicted RBP10.12□□□□□ -0.79
CSNK1E-201ENST00000359867 MORN3Q6PF18 240 aaPredicted RBP10.12□□□□□ -0.79
CSNK1E-201ENST00000359867 WFDC9Q8NEX5 89 aa10.12□□□□□ -0.79
CSNK1E-201ENST00000359867 RASL10AQ92737 203 aa10.12□□□□□ -0.79
CSNK1E-201ENST00000359867 MDFICQ9P1T7 246 aa10.12□□□□□ -0.79
CSNK1E-201ENST00000359867 RBMY1BA6NDE4 496 aaKnown RBP10.12□□□□□ -0.79
CSNK1E-201ENST00000359867 RBMY1EA6NEQ0 496 aaKnown RBP10.12□□□□□ -0.79
CSNK1E-201ENST00000359867 RBMY1DP0C7P1 496 aaKnown RBP10.12□□□□□ -0.79
CSNK1E-201ENST00000359867 F8VRH5 84 aa10.11□□□□□ -0.79
CSNK1E-201ENST00000359867 PLNP26678 52 aa10.11□□□□□ -0.79
CSNK1E-201ENST00000359867 LINC00315P59091 139 aa10.11□□□□□ -0.79
CSNK1E-201ENST00000359867 H7C1H1 209 aa10.11□□□□□ -0.79
CSNK1E-201ENST00000359867 SUMO2P61956 95 aaKnown RBP10.11□□□□□ -0.79
CSNK1E-201ENST00000359867 C9orf66Q5T8R8 295 aa10.11□□□□□ -0.79
CSNK1E-201ENST00000359867 PPDPFLQ8WWR9 84 aa10.11□□□□□ -0.79
CSNK1E-201ENST00000359867 LINC00467Q9BRT7 94 aa10.11□□□□□ -0.79
CSNK1E-201ENST00000359867 PSMB2P49721 201 aa10.1□□□□□ -0.79
CSNK1E-201ENST00000359867 EMP1P54849 157 aa10.1□□□□□ -0.79
CSNK1E-201ENST00000359867 ZFP2Q6ZN57 461 aa10.1□□□□□ -0.79
CSNK1E-201ENST00000359867 TRBV7-3A0A075B6L6 115 aa10.1□□□□□ -0.79
CSNK1E-201ENST00000359867 RBMY1A1P0DJD3 496 aaKnown RBP10.1□□□□□ -0.79
CSNK1E-201ENST00000359867 RBMY1CP0DJD4 496 aa10.1□□□□□ -0.79
CSNK1E-201ENST00000359867 GAGE2BQ13066 116 aa10.1□□□□□ -0.79
CSNK1E-201ENST00000359867 RBMY1FQ15415 496 aaKnown RBP10.1□□□□□ -0.79
CSNK1E-201ENST00000359867 ODF3L2Q3SX64 289 aa10.1□□□□□ -0.79
CSNK1E-201ENST00000359867 GAGE2EQ4V326 116 aa10.1□□□□□ -0.79
CSNK1E-201ENST00000359867 OXLD1Q5BKU9 147 aa10.1□□□□□ -0.79
CSNK1E-201ENST00000359867 GAGE2DQ9UEU5 116 aa10.1□□□□□ -0.79
CSNK1E-201ENST00000359867 MUC4Q99102 2169 aa10.1□□□□□ -0.79
CSNK1E-201ENST00000359867 CSDC2Q9Y534 153 aaKnown RBP10.09□□□□□ -0.79
CSNK1E-201ENST00000359867 MYMXA0A1B0GTQ4 84 aa10.09□□□□□ -0.79
CSNK1E-201ENST00000359867 MEIG1Q5JSS6 88 aa10.09□□□□□ -0.79
CSNK1E-201ENST00000359867 C2orf66Q6UXQ4 117 aa10.09□□□□□ -0.79
CSNK1E-201ENST00000359867 IFITM1P13164 125 aa10.08□□□□□ -0.8
CSNK1E-201ENST00000359867 ORMDL2Q53FV1 153 aa10.08□□□□□ -0.8
CSNK1E-201ENST00000359867 TTC32Q5I0X7 151 aa10.08□□□□□ -0.8
CSNK1E-201ENST00000359867 TEN1Q86WV5 123 aa10.08□□□□□ -0.8
CSNK1E-201ENST00000359867 NEXN-AS1Q8NBZ9 246 aa10.08□□□□□ -0.8
CSNK1E-201ENST00000359867 PLEKHB2Q96CS7 222 aa10.08□□□□□ -0.8
CSNK1E-201ENST00000359867 BAALCQ8WXS3 180 aa10.08□□□□□ -0.8
CSNK1E-201ENST00000359867 TOMM6Q96B49 74 aa10.08□□□□□ -0.8
CSNK1E-201ENST00000359867 PRADC1Q9BSG0 188 aa10.08□□□□□ -0.8
CSNK1E-201ENST00000359867 SPXQ9BT56 116 aa10.08□□□□□ -0.8
CSNK1E-201ENST00000359867 JPT2Q9H910 190 aa10.08□□□□□ -0.8
CSNK1E-201ENST00000359867 PIK3CD-AS1Q5SR53 167 aa10.07□□□□□ -0.8
CSNK1E-201ENST00000359867 STHQ8IWL8 128 aa10.07□□□□□ -0.8
CSNK1E-201ENST00000359867 INSP01308 110 aa10.07□□□□□ -0.8
CSNK1E-201ENST00000359867 TAL2Q16559 108 aa10.07□□□□□ -0.8
CSNK1E-201ENST00000359867 WFDC10AQ9H1F0 79 aa10.07□□□□□ -0.8
CSNK1E-201ENST00000359867 TRAV12-1A0A0B4J245 112 aa10.06□□□□□ -0.8
CSNK1E-201ENST00000359867 SUMO4Q6EEV6 95 aa10.06□□□□□ -0.8
CSNK1E-201ENST00000359867 A0A087WWL8 130 aa10.06□□□□□ -0.8
CSNK1E-201ENST00000359867 LOC107984156A0A0G2JMH3 177 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms