RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 NDUFA4O00483 81 aa7.5□□□□□ -1.21
RNF40-202ENST00000357890 NDUFA7O95182 113 aa7.5□□□□□ -1.21
RNF40-202ENST00000357890 GNLYP22749 145 aa7.5□□□□□ -1.21
RNF40-202ENST00000357890 BLCAPP62952 87 aa7.5□□□□□ -1.21
RNF40-202ENST00000357890 ZNRF2Q8NHG8 242 aa7.5□□□□□ -1.21
RNF40-202ENST00000357890 C20orf173Q96LM9 149 aa7.5□□□□□ -1.21
RNF40-202ENST00000357890 LENEPQ9Y5L5 61 aa7.5□□□□□ -1.21
RNF40-202ENST00000357890 TINCRA0A1B0GVN0 87 aa7.5□□□□□ -1.21
RNF40-202ENST00000357890 ODF3Q96PU9 254 aa7.5□□□□□ -1.21
RNF40-202ENST00000357890 CENPEQ02224 2701 aa7.5□□□□□ -1.21
RNF40-202ENST00000357890 A0A0J9YXY3 114 aa7.49□□□□□ -1.21
RNF40-202ENST00000357890 H3BT86 120 aa7.49□□□□□ -1.21
RNF40-202ENST00000357890 IGHV3-30-3P0DP02 117 aa7.49□□□□□ -1.21
RNF40-202ENST00000357890 C19orf54Q5BKX5 351 aa7.49□□□□□ -1.21
RNF40-202ENST00000357890 H7C423 109 aa7.49□□□□□ -1.21
RNF40-202ENST00000357890 PRIMA1Q86XR5 153 aa7.49□□□□□ -1.21
RNF40-202ENST00000357890 LINC01619G3V211 115 aa7.49□□□□□ -1.21
RNF40-202ENST00000357890 NSUN5P1Q3KNT7 163 aa7.49□□□□□ -1.21
RNF40-202ENST00000357890 C3orf22Q8N5N4 141 aa7.49□□□□□ -1.21
RNF40-202ENST00000357890 CUBNO60494 3623 aa7.49□□□□□ -1.21
RNF40-202ENST00000357890 A0A1W2PPR1 153 aa7.48□□□□□ -1.21
RNF40-202ENST00000357890 TMEM263Q8WUH6 116 aaKnown RBP7.48□□□□□ -1.21
RNF40-202ENST00000357890 POLQO75417 2590 aa7.48□□□□□ -1.21
RNF40-202ENST00000357890 PRRC2AP48634 2157 aaKnown RBP7.48□□□□□ -1.21
RNF40-202ENST00000357890 A0A0B4J2C4 111 aa7.48□□□□□ -1.21
RNF40-202ENST00000357890 I3L3M4 83 aa7.48□□□□□ -1.21
RNF40-202ENST00000357890 SPINK13Q1W4C9 94 aa7.48□□□□□ -1.21
RNF40-202ENST00000357890 SDIM1Q6ZPB5 146 aa7.48□□□□□ -1.21
RNF40-202ENST00000357890 Q9HAA7 133 aa7.48□□□□□ -1.21
RNF40-202ENST00000357890 UQCRQO14949 82 aa7.47□□□□□ -1.21
RNF40-202ENST00000357890 ZFAND2AQ8N6M9 145 aa7.47□□□□□ -1.21
RNF40-202ENST00000357890 PEMTQ9UBM1 199 aa7.47□□□□□ -1.21
RNF40-202ENST00000357890 HIVEP2P31629 2446 aa7.47□□□□□ -1.21
RNF40-202ENST00000357890 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.47□□□□□ -1.21
RNF40-202ENST00000357890 IGHV3-16A0A0C4DH30 117 aa7.47□□□□□ -1.21
RNF40-202ENST00000357890 IGKV2-29A2NJV5 120 aaPredicted RBP7.47□□□□□ -1.21
RNF40-202ENST00000357890 FAM19A5Q7Z5A7 132 aaPredicted RBP7.47□□□□□ -1.21
RNF40-202ENST00000357890 C1orf43Q9BWL3 253 aa7.47□□□□□ -1.21
RNF40-202ENST00000357890 CSDC2Q9Y534 153 aaKnown RBP7.47□□□□□ -1.21
RNF40-202ENST00000357890 IGHV4-38-2P0DP08 117 aa7.47□□□□□ -1.21
RNF40-202ENST00000357890 SMIM9A6NGZ8 99 aa7.46□□□□□ -1.21
RNF40-202ENST00000357890 P0DMU3 169 aa7.46□□□□□ -1.21
RNF40-202ENST00000357890 FAM231AP0DMU4 169 aa7.46□□□□□ -1.21
RNF40-202ENST00000357890 FAM231CP0DMU5 169 aa7.46□□□□□ -1.21
RNF40-202ENST00000357890 ITLN2Q8WWU7 325 aaPredicted RBP7.46□□□□□ -1.21
RNF40-202ENST00000357890 TIMM17AQ99595 171 aa7.46□□□□□ -1.21
RNF40-202ENST00000357890 NAV2Q8IVL1 2488 aa7.46□□□□□ -1.22
RNF40-202ENST00000357890 LRRK2Q5S007 2527 aa7.46□□□□□ -1.22
RNF40-202ENST00000357890 IGLV4-69A0A075B6H9 119 aa7.46□□□□□ -1.22
RNF40-202ENST00000357890 IGHV4-61A0A0C4DH41 118 aa7.46□□□□□ -1.22
RNF40-202ENST00000357890 NXPH4O95158 308 aa7.46□□□□□ -1.22
RNF40-202ENST00000357890 C11orf68Q9H3H3 251 aaKnown RBP7.46□□□□□ -1.22
RNF40-202ENST00000357890 Q6Q795 121 aa7.46□□□□□ -1.22
RNF40-202ENST00000357890 DNAJC30Q96LL9 226 aa7.46□□□□□ -1.22
RNF40-202ENST00000357890 Q9H8V8 135 aa7.46□□□□□ -1.22
RNF40-202ENST00000357890 BSNQ9UPA5 3926 aa7.45□□□□□ -1.22
RNF40-202ENST00000357890 CRPP02741 224 aa7.45□□□□□ -1.22
RNF40-202ENST00000357890 INAFM2P0DMQ5 153 aa7.45□□□□□ -1.22
RNF40-202ENST00000357890 DAZ2Q13117 558 aaKnown RBP7.45□□□□□ -1.22
RNF40-202ENST00000357890 DAZ4Q86SG3 579 aaKnown RBP7.45□□□□□ -1.22
RNF40-202ENST00000357890 DAZ3Q9NR90 486 aaKnown RBP7.45□□□□□ -1.22
RNF40-202ENST00000357890 H3BUA1 57 aa7.45□□□□□ -1.22
RNF40-202ENST00000357890 LINC00643Q86TS7 51 aa7.45□□□□□ -1.22
RNF40-202ENST00000357890 DSCR8Q96T75 97 aa7.45□□□□□ -1.22
RNF40-202ENST00000357890 COL12A1Q99715 3063 aa7.45□□□□□ -1.22
RNF40-202ENST00000357890 LINC00158P58513 81 aa7.45□□□□□ -1.22
RNF40-202ENST00000357890 RNF152Q8N8N0 203 aa7.45□□□□□ -1.22
RNF40-202ENST00000357890 CELSR1Q9NYQ6 3014 aa7.44□□□□□ -1.22
RNF40-202ENST00000357890 EPG5Q9HCE0 2579 aa7.44□□□□□ -1.22
RNF40-202ENST00000357890 TRBV30A0A0K0K1B3 111 aa7.44□□□□□ -1.22
RNF40-202ENST00000357890 CRYGDP07320 174 aa7.44□□□□□ -1.22
RNF40-202ENST00000357890 MSMBP08118 114 aa7.44□□□□□ -1.22
RNF40-202ENST00000357890 COX6B1P14854 86 aa7.44□□□□□ -1.22
RNF40-202ENST00000357890 U3KQE9 123 aa7.44□□□□□ -1.22
RNF40-202ENST00000357890 TMEM223A0PJW6 202 aa7.44□□□□□ -1.22
RNF40-202ENST00000357890 HRCT1Q6UXD1 115 aa7.44□□□□□ -1.22
RNF40-202ENST00000357890 COPS9Q8WXC6 57 aa7.44□□□□□ -1.22
RNF40-202ENST00000357890 PRB1P04280 392 aa7.44□□□□□ -1.22
RNF40-202ENST00000357890 ACYP1P07311 99 aa7.44□□□□□ -1.22
RNF40-202ENST00000357890 C19orf84I3L1E1 186 aa7.43□□□□□ -1.22
RNF40-202ENST00000357890 ATOX1O00244 68 aa7.43□□□□□ -1.22
RNF40-202ENST00000357890 MDFICQ9P1T7 246 aa7.43□□□□□ -1.22
RNF40-202ENST00000357890 B4DSR2 109 aa7.43□□□□□ -1.22
RNF40-202ENST00000357890 IGHG2P01859 326 aa7.43□□□□□ -1.22
RNF40-202ENST00000357890 IGHV4-4A0A075B6R2 117 aa7.43□□□□□ -1.22
RNF40-202ENST00000357890 PAX4O43316 350 aa7.43□□□□□ -1.22
RNF40-202ENST00000357890 RNASE3P12724 160 aaKnown RBP7.43□□□□□ -1.22
RNF40-202ENST00000357890 MAPK1IP1LQ8NDC0 245 aa7.42□□□□□ -1.22
RNF40-202ENST00000357890 PSMG3-AS1Q96PY0 264 aa7.42□□□□□ -1.22
RNF40-202ENST00000357890 C14orf132Q9NPU4 83 aa7.42□□□□□ -1.22
RNF40-202ENST00000357890 IGIPA6NJ69 53 aa7.42□□□□□ -1.22
RNF40-202ENST00000357890 TSHBP01222 138 aa7.42□□□□□ -1.22
RNF40-202ENST00000357890 UBE2L6O14933 153 aa7.42□□□□□ -1.22
RNF40-202ENST00000357890 IGHV3-53P01767 116 aa7.42□□□□□ -1.22
RNF40-202ENST00000357890 C20orf203Q8NBC4 194 aa7.42□□□□□ -1.22
RNF40-202ENST00000357890 C10orf105Q8TEF2 133 aa7.42□□□□□ -1.22
RNF40-202ENST00000357890 MIAQ16674 131 aa7.41□□□□□ -1.22
RNF40-202ENST00000357890 ABCA12Q86UK0 2595 aa7.41□□□□□ -1.22
RNF40-202ENST00000357890 PKD1L2Q7Z442 2459 aa7.41□□□□□ -1.22
RNF40-202ENST00000357890 MTORP42345 2549 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms