RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 IGLV10-54A0A075B6I4 117 aa5.39□□□□□ -1.55
COL4A3BP-202ENST00000357457 IGHV1-24A0A0C4DH33 117 aa5.39□□□□□ -1.55
COL4A3BP-202ENST00000357457 F5H697 171 aa5.39□□□□□ -1.55
COL4A3BP-202ENST00000357457 PHOX2AO14813 284 aa5.39□□□□□ -1.55
COL4A3BP-202ENST00000357457 DEFA1P59665 94 aa5.39□□□□□ -1.55
COL4A3BP-202ENST00000357457 DEFA3P59666 94 aa5.39□□□□□ -1.55
COL4A3BP-202ENST00000357457 KRTAP4-2Q9BYR5 136 aa5.39□□□□□ -1.55
COL4A3BP-202ENST00000357457 IGLV4-60A0A075B6I1 120 aa5.38□□□□□ -1.55
COL4A3BP-202ENST00000357457 BORCS7-ASMTA0A0B4J1R7 106 aa5.38□□□□□ -1.55
COL4A3BP-202ENST00000357457 M0QY20 66 aa5.38□□□□□ -1.55
COL4A3BP-202ENST00000357457 S100A9P06702 114 aaKnown RBP5.38□□□□□ -1.55
COL4A3BP-202ENST00000357457 INO80EQ8NBZ0 244 aaPredicted RBP5.38□□□□□ -1.55
COL4A3BP-202ENST00000357457 OCC1Q8TAD7 63 aa5.38□□□□□ -1.55
COL4A3BP-202ENST00000357457 C7orf33Q8WU49 177 aa5.38□□□□□ -1.55
COL4A3BP-202ENST00000357457 GFRA4Q9GZZ7 299 aa5.38□□□□□ -1.55
COL4A3BP-202ENST00000357457 DPH3P1Q9H4G8 78 aa5.38□□□□□ -1.55
COL4A3BP-202ENST00000357457 ALG5Q9Y673 324 aa5.38□□□□□ -1.55
COL4A3BP-202ENST00000357457 A0A0J9YXV3 536 aa5.37□□□□□ -1.55
COL4A3BP-202ENST00000357457 MAP1LC3B2A6NCE7 125 aa5.37□□□□□ -1.55
COL4A3BP-202ENST00000357457 C5orf52A6NGY3 159 aa5.37□□□□□ -1.55
COL4A3BP-202ENST00000357457 AKR1C3P42330 323 aa5.37□□□□□ -1.55
COL4A3BP-202ENST00000357457 COX6A2Q02221 97 aa5.37□□□□□ -1.55
COL4A3BP-202ENST00000357457 AKR1C8PQ5T2L2 129 aa5.37□□□□□ -1.55
COL4A3BP-202ENST00000357457 LCE4AQ5TA78 99 aa5.37□□□□□ -1.55
COL4A3BP-202ENST00000357457 SPANXN1Q5VSR9 72 aa5.37□□□□□ -1.55
COL4A3BP-202ENST00000357457 MAP1LC3BQ9GZQ8 125 aa5.37□□□□□ -1.55
COL4A3BP-202ENST00000357457 MUC21A0A0G2JKD1 596 aa5.36□□□□□ -1.55
COL4A3BP-202ENST00000357457 MUC21A0A140T8X8 626 aa5.36□□□□□ -1.55
COL4A3BP-202ENST00000357457 TRIAP1O43715 76 aa5.36□□□□□ -1.55
COL4A3BP-202ENST00000357457 NDUFS6O75380 124 aaKnown RBP5.36□□□□□ -1.55
COL4A3BP-202ENST00000357457 GIPP09681 153 aaPredicted RBP5.36□□□□□ -1.55
COL4A3BP-202ENST00000357457 SMIM17P0DL12 118 aa5.36□□□□□ -1.55
COL4A3BP-202ENST00000357457 RPS10P46783 165 aaKnown RBP5.36□□□□□ -1.55
COL4A3BP-202ENST00000357457 PRR3P79522 188 aaKnown RBP5.36□□□□□ -1.55
COL4A3BP-202ENST00000357457 SRSF9Q13242 221 aaKnown RBP eCLIP5.36□□□□□ -1.55
COL4A3BP-202ENST00000357457 BAGE2Q86Y30 109 aa5.36□□□□□ -1.55
COL4A3BP-202ENST00000357457 C15orf56Q8N910 161 aa5.36□□□□□ -1.55
COL4A3BP-202ENST00000357457 PRSS3P2Q8NHM4 247 aa5.36□□□□□ -1.55
COL4A3BP-202ENST00000357457 STOML3Q8TAV4 291 aa5.36□□□□□ -1.55
COL4A3BP-202ENST00000357457 CYTL1Q9NRR1 136 aa5.36□□□□□ -1.55
COL4A3BP-202ENST00000357457 H7C1H1 209 aa5.35□□□□□ -1.55
COL4A3BP-202ENST00000357457 RAB5CP51148 216 aa5.35□□□□□ -1.55
COL4A3BP-202ENST00000357457 SPINK6Q6UWN8 80 aa5.35□□□□□ -1.55
COL4A3BP-202ENST00000357457 GTSF1Q8WW33 167 aa5.35□□□□□ -1.55
COL4A3BP-202ENST00000357457 PGLYRP4Q96LB8 373 aa5.35□□□□□ -1.55
COL4A3BP-202ENST00000357457 AP1S3Q96PC3 154 aa5.35□□□□□ -1.55
COL4A3BP-202ENST00000357457 TMEM243Q9BU79 118 aa5.35□□□□□ -1.55
COL4A3BP-202ENST00000357457 MED28Q9H204 178 aa5.35□□□□□ -1.55
COL4A3BP-202ENST00000357457 IGLC6P0CF74 106 aa5.34□□□□□ -1.55
COL4A3BP-202ENST00000357457 SSTP61278 116 aa5.34□□□□□ -1.55
COL4A3BP-202ENST00000357457 SUMO4Q6EEV6 95 aa5.34□□□□□ -1.55
COL4A3BP-202ENST00000357457 TMUB2Q71RG4 321 aa5.34□□□□□ -1.55
COL4A3BP-202ENST00000357457 STPG4Q8N801 248 aa5.34□□□□□ -1.55
COL4A3BP-202ENST00000357457 MBD3L1Q8WWY6 194 aa5.34□□□□□ -1.55
COL4A3BP-202ENST00000357457 FXYD6-FXYD2A0A087WZ82 144 aa5.33□□□□□ -1.56
COL4A3BP-202ENST00000357457 GAGE12HA6NDE8 117 aa5.33□□□□□ -1.56
COL4A3BP-202ENST00000357457 F8WDY8 70 aa5.33□□□□□ -1.56
COL4A3BP-202ENST00000357457 G3V3Q6 166 aa5.33□□□□□ -1.56
COL4A3BP-202ENST00000357457 NKX2-5P52952 324 aaPredicted RBP5.33□□□□□ -1.56
COL4A3BP-202ENST00000357457 RNF151Q2KHN1 245 aa5.33□□□□□ -1.56
COL4A3BP-202ENST00000357457 RASL11AQ6T310 242 aa5.33□□□□□ -1.56
COL4A3BP-202ENST00000357457 REG3GQ6UW15 175 aa5.33□□□□□ -1.56
COL4A3BP-202ENST00000357457 TPPP3Q9BW30 176 aa5.33□□□□□ -1.56
COL4A3BP-202ENST00000357457 NIT2Q9NQR4 276 aa5.33□□□□□ -1.56
COL4A3BP-202ENST00000357457 GVQW2A0A096LPI5 108 aaPredicted RBP5.32□□□□□ -1.56
COL4A3BP-202ENST00000357457 IGKV2-24A0A0C4DH68 120 aa5.32□□□□□ -1.56
COL4A3BP-202ENST00000357457 XKRY2A2RUG3 117 aa5.32□□□□□ -1.56
COL4A3BP-202ENST00000357457 GAS8-AS1O95177 125 aa5.32□□□□□ -1.56
COL4A3BP-202ENST00000357457 VPREB1P12018 145 aa5.32□□□□□ -1.56
COL4A3BP-202ENST00000357457 CACNG7P62955 275 aa5.32□□□□□ -1.56
COL4A3BP-202ENST00000357457 LINC00474Q9P2X8 69 aa5.32□□□□□ -1.56
COL4A3BP-202ENST00000357457 A0A096LNI7 61 aa5.31□□□□□ -1.56
COL4A3BP-202ENST00000357457 C19orf71A6NCJ1 209 aa5.31□□□□□ -1.56
COL4A3BP-202ENST00000357457 F2Z2F3 143 aa5.31□□□□□ -1.56
COL4A3BP-202ENST00000357457 UBE2L6O14933 153 aa5.31□□□□□ -1.56
COL4A3BP-202ENST00000357457 MGPP08493 103 aa5.31□□□□□ -1.56
COL4A3BP-202ENST00000357457 RPL35P42766 123 aaKnown RBP5.31□□□□□ -1.56
COL4A3BP-202ENST00000357457 SULT1A2P50226 295 aa5.31□□□□□ -1.56
COL4A3BP-202ENST00000357457 RPS20P60866 119 aaKnown RBP5.31□□□□□ -1.56
COL4A3BP-202ENST00000357457 COTL1Q14019 142 aa5.31□□□□□ -1.56
COL4A3BP-202ENST00000357457 HIGD2BQ4VC39 106 aa5.31□□□□□ -1.56
COL4A3BP-202ENST00000357457 FER1L6-AS1Q8NA97 138 aa5.31□□□□□ -1.56
COL4A3BP-202ENST00000357457 LYPD6BQ8NI32 183 aa5.31□□□□□ -1.56
COL4A3BP-202ENST00000357457 SFT2D1Q8WV19 159 aa5.31□□□□□ -1.56
COL4A3BP-202ENST00000357457 UMAD1C9J7I0 102 aa5.3□□□□□ -1.56
COL4A3BP-202ENST00000357457 PFDN1O60925 122 aa5.3□□□□□ -1.56
COL4A3BP-202ENST00000357457 AMTP48728 403 aa5.3□□□□□ -1.56
COL4A3BP-202ENST00000357457 Q6ZRP5 223 aa5.3□□□□□ -1.56
COL4A3BP-202ENST00000357457 CHCHD10Q8WYQ3 142 aaPredicted RBP5.3□□□□□ -1.56
COL4A3BP-202ENST00000357457 CHTOPQ9Y3Y2 248 aaKnown RBP5.3□□□□□ -1.56
COL4A3BP-202ENST00000357457 H7C423 109 aa5.29□□□□□ -1.56
COL4A3BP-202ENST00000357457 TRGC1P0CF51 173 aa5.29□□□□□ -1.56
COL4A3BP-202ENST00000357457 NTF3P20783 257 aa5.29□□□□□ -1.56
COL4A3BP-202ENST00000357457 SUMO2P61956 95 aaKnown RBP5.29□□□□□ -1.56
COL4A3BP-202ENST00000357457 FOXI1Q12951 378 aa5.29□□□□□ -1.56
COL4A3BP-202ENST00000357457 C9orf62Q8N4C0 152 aa5.29□□□□□ -1.56
COL4A3BP-202ENST00000357457 KCNRGQ8N5I3 272 aa5.29□□□□□ -1.56
COL4A3BP-202ENST00000357457 OR2D3Q8NGH3 330 aa5.29□□□□□ -1.56
COL4A3BP-202ENST00000357457 C11orf52Q96A22 123 aa5.29□□□□□ -1.56
COL4A3BP-202ENST00000357457 IGKV3OR2-268A0A0C4DH90 116 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms