RNA–Protein interactions for RNA: ENST00000355637.8

RBFOX1-203, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 3,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-203ENST00000355637 CACNA1HO95180 2353 aa6.6□□□□□ -1.35
RBFOX1-203ENST00000355637 UNQ9165/PRO28630Q6UXU0 137 aa6.6□□□□□ -1.35
RBFOX1-203ENST00000355637 DEFB124Q8NES8 71 aa6.6□□□□□ -1.35
RBFOX1-203ENST00000355637 S4R3C0 116 aa6.6□□□□□ -1.35
RBFOX1-203ENST00000355637 BUB1B-PAK6H3BSN5 160 aa6.59□□□□□ -1.35
RBFOX1-203ENST00000355637 THAP8Q8NA92 274 aa6.59□□□□□ -1.35
RBFOX1-203ENST00000355637 IGHV1-58A0A0C4DH39 117 aa6.58□□□□□ -1.36
RBFOX1-203ENST00000355637 SOCS3O14543 225 aa6.58□□□□□ -1.36
RBFOX1-203ENST00000355637 NCR3O14931 201 aa6.58□□□□□ -1.36
RBFOX1-203ENST00000355637 ESRGQ1W209 222 aa6.58□□□□□ -1.36
RBFOX1-203ENST00000355637 C9orf129Q5T035 196 aaKnown RBP6.58□□□□□ -1.36
RBFOX1-203ENST00000355637 C1orf158Q8N1D5 194 aa6.58□□□□□ -1.36
RBFOX1-203ENST00000355637 NDUFA4L2Q9NRX3 87 aa6.58□□□□□ -1.36
RBFOX1-203ENST00000355637 A0A0J9YXV3 536 aa6.58□□□□□ -1.36
RBFOX1-203ENST00000355637 TMEM256-PLSCR3K7ERE1 68 aa6.58□□□□□ -1.36
RBFOX1-203ENST00000355637 NDUFA12Q9UI09 145 aa6.58□□□□□ -1.36
RBFOX1-203ENST00000355637 BDP1A6H8Y1 2624 aa6.58□□□□□ -1.36
RBFOX1-203ENST00000355637 TRAV7A0A075B6U4 112 aa6.58□□□□□ -1.36
RBFOX1-203ENST00000355637 IGHV1OR15-1A0A075B7D0 117 aa6.58□□□□□ -1.36
RBFOX1-203ENST00000355637 TSHBP01222 138 aa6.58□□□□□ -1.36
RBFOX1-203ENST00000355637 ASPMQ8IZT6 3477 aa6.58□□□□□ -1.36
RBFOX1-203ENST00000355637 F5H697 171 aa6.57□□□□□ -1.36
RBFOX1-203ENST00000355637 CCL24O00175 119 aa6.57□□□□□ -1.36
RBFOX1-203ENST00000355637 PLA2G2CQ5R387 149 aa6.57□□□□□ -1.36
RBFOX1-203ENST00000355637 TTC28Q96AY4 2481 aa6.57□□□□□ -1.36
RBFOX1-203ENST00000355637 TRBV27A0A0K0K1C4 114 aa6.57□□□□□ -1.36
RBFOX1-203ENST00000355637 TRBV6-1A0A0K0K1D8 114 aa6.57□□□□□ -1.36
RBFOX1-203ENST00000355637 TEX22C9J3V5 150 aa6.57□□□□□ -1.36
RBFOX1-203ENST00000355637 IGLV1-44P01699 117 aa6.57□□□□□ -1.36
RBFOX1-203ENST00000355637 IGF1P05019 195 aa6.57□□□□□ -1.36
RBFOX1-203ENST00000355637 RNASE1P07998 156 aaKnown RBP6.57□□□□□ -1.36
RBFOX1-203ENST00000355637 RNASE13Q5GAN3 156 aaKnown RBP6.57□□□□□ -1.36
RBFOX1-203ENST00000355637 Q8N2B8 174 aa6.57□□□□□ -1.36
RBFOX1-203ENST00000355637 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.57□□□□□ -1.36
RBFOX1-203ENST00000355637 IGHV3OR16-8A0A075B7F1 116 aa6.56□□□□□ -1.36
RBFOX1-203ENST00000355637 TRAV13-2A0A0B4J235 113 aa6.56□□□□□ -1.36
RBFOX1-203ENST00000355637 IGHV3-30-3P0DP02 117 aa6.56□□□□□ -1.36
RBFOX1-203ENST00000355637 C17orf58Q2M2W7 97 aa6.56□□□□□ -1.36
RBFOX1-203ENST00000355637 KTN1-AS1Q86SY8 53 aa6.56□□□□□ -1.36
RBFOX1-203ENST00000355637 PCNX1Q96RV3 2341 aa6.56□□□□□ -1.36
RBFOX1-203ENST00000355637 IGKV3D-20A0A0C4DH25 116 aa6.56□□□□□ -1.36
RBFOX1-203ENST00000355637 A8MU10 97 aa6.56□□□□□ -1.36
RBFOX1-203ENST00000355637 TMEM190Q8WZ59 177 aa6.56□□□□□ -1.36
RBFOX1-203ENST00000355637 FAM218AQ96MZ4 157 aa6.56□□□□□ -1.36
RBFOX1-203ENST00000355637 BOD1L1Q8NFC6 3051 aa6.56□□□□□ -1.36
RBFOX1-203ENST00000355637 ECSCRQ19T08 205 aa6.56□□□□□ -1.36
RBFOX1-203ENST00000355637 PIK3CD-AS1Q5SR53 167 aa6.56□□□□□ -1.36
RBFOX1-203ENST00000355637 C8orf87E5RJ46 101 aa6.55□□□□□ -1.36
RBFOX1-203ENST00000355637 KLKP1Q107X0 134 aa6.55□□□□□ -1.36
RBFOX1-203ENST00000355637 RAI1Q7Z5J4 1906 aaPredicted RBP6.55□□□□□ -1.36
RBFOX1-203ENST00000355637 NDUFB3O43676 98 aa6.55□□□□□ -1.36
RBFOX1-203ENST00000355637 MIFP14174 115 aa6.55□□□□□ -1.36
RBFOX1-203ENST00000355637 HAMPP81172 84 aa6.55□□□□□ -1.36
RBFOX1-203ENST00000355637 MIAQ16674 131 aa6.55□□□□□ -1.36
RBFOX1-203ENST00000355637 TMEM14CQ9P0S9 112 aa6.55□□□□□ -1.36
RBFOX1-203ENST00000355637 ABCA4P78363 2273 aa6.55□□□□□ -1.36
RBFOX1-203ENST00000355637 SDHAF1A6NFY7 115 aa6.55□□□□□ -1.36
RBFOX1-203ENST00000355637 MDFIQ99750 246 aa6.55□□□□□ -1.36
RBFOX1-203ENST00000355637 SPTBN2O15020 2390 aa6.54□□□□□ -1.36
RBFOX1-203ENST00000355637 RPL27AP46776 148 aaKnown RBP6.54□□□□□ -1.36
RBFOX1-203ENST00000355637 IGHV3-72A0A0B4J1Y9 119 aa6.54□□□□□ -1.36
RBFOX1-203ENST00000355637 TRAV10A0A0B4J240 114 aa6.54□□□□□ -1.36
RBFOX1-203ENST00000355637 IGHV1-46P01743 117 aa6.54□□□□□ -1.36
RBFOX1-203ENST00000355637 CCL3L1P16619 93 aa6.54□□□□□ -1.36
RBFOX1-203ENST00000355637 ZNF876PQ49A33 203 aa6.54□□□□□ -1.36
RBFOX1-203ENST00000355637 SEM1Q6ZVN7 128 aa6.54□□□□□ -1.36
RBFOX1-203ENST00000355637 CNFNQ9BYD5 112 aa6.54□□□□□ -1.36
RBFOX1-203ENST00000355637 FUSP35637 526 aaKnown RBP eCLIP6.53□□□□□ -1.36
RBFOX1-203ENST00000355637 CCL17Q92583 94 aa6.53□□□□□ -1.36
RBFOX1-203ENST00000355637 GAFA1Q96PS6 74 aa6.53□□□□□ -1.36
RBFOX1-203ENST00000355637 TM2D3Q9BRN9 247 aa6.53□□□□□ -1.36
RBFOX1-203ENST00000355637 ZFHX4Q86UP3 3567 aa6.53□□□□□ -1.36
RBFOX1-203ENST00000355637 M0R378 163 aa6.53□□□□□ -1.36
RBFOX1-203ENST00000355637 LYPD1Q8N2G4 141 aa6.53□□□□□ -1.36
RBFOX1-203ENST00000355637 Q8NA96 180 aa6.53□□□□□ -1.36
RBFOX1-203ENST00000355637 CFAP47Q6ZTR5 3102 aa6.53□□□□□ -1.36
RBFOX1-203ENST00000355637 IGHV3-35A0A0C4DH35 117 aa6.53□□□□□ -1.36
RBFOX1-203ENST00000355637 IGIPA6NJ69 53 aa6.53□□□□□ -1.36
RBFOX1-203ENST00000355637 PHLDA3Q9Y5J5 127 aa6.53□□□□□ -1.36
RBFOX1-203ENST00000355637 AKAP6Q13023 2319 aa6.52□□□□□ -1.37
RBFOX1-203ENST00000355637 SLPIP03973 132 aa6.52□□□□□ -1.37
RBFOX1-203ENST00000355637 UBL5Q9BZL1 73 aa6.52□□□□□ -1.37
RBFOX1-203ENST00000355637 C11orf21Q9P2W6 132 aa6.52□□□□□ -1.37
RBFOX1-203ENST00000355637 C22orf24Q9Y442 160 aa6.52□□□□□ -1.37
RBFOX1-203ENST00000355637 F6UB75 175 aa6.52□□□□□ -1.37
RBFOX1-203ENST00000355637 RIF1Q5UIP0 2472 aaKnown RBP6.52□□□□□ -1.37
RBFOX1-203ENST00000355637 COL27A1Q8IZC6 1860 aaPredicted RBP6.52□□□□□ -1.37
RBFOX1-203ENST00000355637 CGB3P0DN86 165 aa6.51□□□□□ -1.37
RBFOX1-203ENST00000355637 CGB7P0DN87 165 aa6.51□□□□□ -1.37
RBFOX1-203ENST00000355637 ATP5EP56381 51 aaPredicted RBP6.51□□□□□ -1.37
RBFOX1-203ENST00000355637 PRR26Q8N8Z3 221 aa6.51□□□□□ -1.37
RBFOX1-203ENST00000355637 NDUFC1O43677 76 aa6.51□□□□□ -1.37
RBFOX1-203ENST00000355637 ZNF73O43830 326 aaPredicted RBP6.51□□□□□ -1.37
RBFOX1-203ENST00000355637 TMEM141Q96I45 108 aa6.51□□□□□ -1.37
RBFOX1-203ENST00000355637 LITAFQ99732 161 aa6.51□□□□□ -1.37
RBFOX1-203ENST00000355637 FAM215AQ9Y5M1 114 aa6.51□□□□□ -1.37
RBFOX1-203ENST00000355637 C22orf34Q6ZV56 151 aa6.51□□□□□ -1.37
RBFOX1-203ENST00000355637 ZNF575Q86XF7 245 aa6.51□□□□□ -1.37
RBFOX1-203ENST00000355637 RNASE4P34096 147 aaKnown RBP6.5□□□□□ -1.37
RBFOX1-203ENST00000355637 IGLV3-9A0A075B6K5 115 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms