RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 HBDP02042 147 aa6.82□□□□□ -1.32
MRPL55-204ENST00000348259 PRM2P04554 102 aa6.82□□□□□ -1.32
MRPL55-204ENST00000348259 C3orf79P0CE67 100 aa6.82□□□□□ -1.32
MRPL55-204ENST00000348259 BTF3P20290 206 aaKnown RBP6.82□□□□□ -1.32
MRPL55-204ENST00000348259 ST20Q9HBF5 79 aa6.82□□□□□ -1.32
MRPL55-204ENST00000348259 NIT2Q9NQR4 276 aa6.82□□□□□ -1.32
MRPL55-204ENST00000348259 DMBT1Q9UGM3 2413 aaPredicted RBP6.82□□□□□ -1.32
MRPL55-204ENST00000348259 IGHV3OR16-12A0A075B7B8 117 aa6.81□□□□□ -1.32
MRPL55-204ENST00000348259 DEFB131BA0A096LNP1 70 aa6.81□□□□□ -1.32
MRPL55-204ENST00000348259 TRBV27A0A0K0K1C4 114 aa6.81□□□□□ -1.32
MRPL55-204ENST00000348259 VCYO14598 125 aa6.81□□□□□ -1.32
MRPL55-204ENST00000348259 TCAPO15273 167 aa6.81□□□□□ -1.32
MRPL55-204ENST00000348259 IGHV3-53P01767 116 aa6.81□□□□□ -1.32
MRPL55-204ENST00000348259 G0S2P27469 103 aa6.81□□□□□ -1.32
MRPL55-204ENST00000348259 LAGE3Q14657 143 aa6.81□□□□□ -1.32
MRPL55-204ENST00000348259 ORMDL2Q53FV1 153 aa6.81□□□□□ -1.32
MRPL55-204ENST00000348259 RPL39LQ96EH5 51 aaKnown RBP6.81□□□□□ -1.32
MRPL55-204ENST00000348259 TMEM70Q9BUB7 260 aa6.81□□□□□ -1.32
MRPL55-204ENST00000348259 TRAV4A0A0B4J268 109 aa6.8□□□□□ -1.32
MRPL55-204ENST00000348259 SCGB1D1O95968 90 aa6.8□□□□□ -1.32
MRPL55-204ENST00000348259 KRTDAPP60985 99 aa6.8□□□□□ -1.32
MRPL55-204ENST00000348259 ZNF56Q15929 161 aa6.8□□□□□ -1.32
MRPL55-204ENST00000348259 PMCHL1Q16048 86 aa6.8□□□□□ -1.32
MRPL55-204ENST00000348259 FAM74A4Q5TZK3 123 aa6.8□□□□□ -1.32
MRPL55-204ENST00000348259 PET117Q6UWS5 81 aa6.8□□□□□ -1.32
MRPL55-204ENST00000348259 Q8N1X5 172 aa6.8□□□□□ -1.32
MRPL55-204ENST00000348259 Q8N976 141 aa6.8□□□□□ -1.32
MRPL55-204ENST00000348259 DNAJC30Q96LL9 226 aa6.8□□□□□ -1.32
MRPL55-204ENST00000348259 C18orf15Q96N68 181 aa6.8□□□□□ -1.32
MRPL55-204ENST00000348259 MAP1LC3CQ9BXW4 147 aa6.8□□□□□ -1.32
MRPL55-204ENST00000348259 TRGV1A0A0A0MS02 117 aa6.79□□□□□ -1.32
MRPL55-204ENST00000348259 TEX48A0A1B0GUV7 120 aa6.79□□□□□ -1.32
MRPL55-204ENST00000348259 SYS1-DBNDD2H3BUS1 97 aa6.79□□□□□ -1.32
MRPL55-204ENST00000348259 S100A12P80511 92 aa6.79□□□□□ -1.32
MRPL55-204ENST00000348259 TEX43Q6ZNM6 134 aa6.79□□□□□ -1.32
MRPL55-204ENST00000348259 LINC00612Q8N6U2 182 aa6.79□□□□□ -1.32
MRPL55-204ENST00000348259 MRPL16Q9NX20 251 aaKnown RBP6.79□□□□□ -1.32
MRPL55-204ENST00000348259 SDHAF1A6NFY7 115 aa6.78□□□□□ -1.32
MRPL55-204ENST00000348259 Q6ZTI0 123 aa6.78□□□□□ -1.32
MRPL55-204ENST00000348259 MAPKAPK5-AS1Q8N8E1 139 aa6.78□□□□□ -1.32
MRPL55-204ENST00000348259 OR4C5Q8NGB2 326 aa6.78□□□□□ -1.32
MRPL55-204ENST00000348259 KIR2DL4Q99706 377 aa6.78□□□□□ -1.32
MRPL55-204ENST00000348259 NOP10Q9NPE3 64 aaKnown RBP6.78□□□□□ -1.32
MRPL55-204ENST00000348259 TRBV10-1A0A0K0K1A3 114 aa6.77□□□□□ -1.33
MRPL55-204ENST00000348259 C20orf202A1L168 122 aa6.77□□□□□ -1.33
MRPL55-204ENST00000348259 I3L3M4 83 aa6.77□□□□□ -1.33
MRPL55-204ENST00000348259 ATP5LO75964 103 aa6.77□□□□□ -1.33
MRPL55-204ENST00000348259 TNP2Q05952 138 aa6.77□□□□□ -1.33
MRPL55-204ENST00000348259 RHOHQ15669 191 aa6.77□□□□□ -1.33
MRPL55-204ENST00000348259 LINC01545Q5VT33 79 aa6.77□□□□□ -1.33
MRPL55-204ENST00000348259 LINC00173Q6ZV60 143 aa6.77□□□□□ -1.33
MRPL55-204ENST00000348259 TOMM6Q96B49 74 aa6.77□□□□□ -1.33
MRPL55-204ENST00000348259 IFI27L1Q96BM0 104 aa6.77□□□□□ -1.33
MRPL55-204ENST00000348259 LYRM9A8MSI8 78 aa6.76□□□□□ -1.33
MRPL55-204ENST00000348259 NUDT3O95989 172 aa6.76□□□□□ -1.33
MRPL55-204ENST00000348259 EMP1P54849 157 aa6.76□□□□□ -1.33
MRPL55-204ENST00000348259 CDPF1Q6NVV7 123 aa6.76□□□□□ -1.33
MRPL55-204ENST00000348259 Q6ZSN1 163 aa6.76□□□□□ -1.33
MRPL55-204ENST00000348259 TNFRSF18Q9Y5U5 241 aa6.76□□□□□ -1.33
MRPL55-204ENST00000348259 TRBV6-4A0A1B0GX49 114 aa6.75□□□□□ -1.33
MRPL55-204ENST00000348259 C16orf90A8MZG2 172 aa6.75□□□□□ -1.33
MRPL55-204ENST00000348259 SPART-AS1P0CW21 52 aa6.75□□□□□ -1.33
MRPL55-204ENST00000348259 C1orf134Q5TEV5 83 aa6.75□□□□□ -1.33
MRPL55-204ENST00000348259 NEXN-AS1Q8NBZ9 246 aa6.75□□□□□ -1.33
MRPL55-204ENST00000348259 ZNF479Q96JC4 524 aa6.75□□□□□ -1.33
MRPL55-204ENST00000348259 TRGV2A0A075B6R0 118 aa6.74□□□□□ -1.33
MRPL55-204ENST00000348259 IGHV3-73A0A0B4J1V6 119 aa6.74□□□□□ -1.33
MRPL55-204ENST00000348259 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.74□□□□□ -1.33
MRPL55-204ENST00000348259 TSHBP01222 138 aa6.74□□□□□ -1.33
MRPL55-204ENST00000348259 NPSP0C0P6 89 aa6.74□□□□□ -1.33
MRPL55-204ENST00000348259 PKIAP61925 76 aa6.74□□□□□ -1.33
MRPL55-204ENST00000348259 C2orf66Q6UXQ4 117 aa6.74□□□□□ -1.33
MRPL55-204ENST00000348259 ERASQ7Z444 233 aa6.74□□□□□ -1.33
MRPL55-204ENST00000348259 DKK2Q9UBU2 259 aa6.74□□□□□ -1.33
MRPL55-204ENST00000348259 CYSLTR1Q9Y271 337 aa6.74□□□□□ -1.33
MRPL55-204ENST00000348259 SRRM2Q9UQ35 2752 aaKnown RBP6.73□□□□□ -1.33
MRPL55-204ENST00000348259 TRBV7-3A0A075B6L6 115 aa6.73□□□□□ -1.33
MRPL55-204ENST00000348259 TRAV9-2A0A087WT02 112 aa6.73□□□□□ -1.33
MRPL55-204ENST00000348259 TRAV12-1A0A0B4J245 112 aa6.73□□□□□ -1.33
MRPL55-204ENST00000348259 GAGE12BA1L429 117 aa6.73□□□□□ -1.33
MRPL55-204ENST00000348259 K7EQD1 137 aa6.73□□□□□ -1.33
MRPL55-204ENST00000348259 GAGE7O76087 117 aa6.73□□□□□ -1.33
MRPL55-204ENST00000348259 GAGE12FP0CL80 117 aa6.73□□□□□ -1.33
MRPL55-204ENST00000348259 GAGE12GP0CL81 117 aa6.73□□□□□ -1.33
MRPL55-204ENST00000348259 GAGE12IP0CL82 117 aa6.73□□□□□ -1.33
MRPL55-204ENST00000348259 ZNF664Q8N3J9 261 aa6.73□□□□□ -1.33
MRPL55-204ENST00000348259 TMEM141Q96I45 108 aa6.73□□□□□ -1.33
MRPL55-204ENST00000348259 TIMM17AQ99595 171 aa6.73□□□□□ -1.33
MRPL55-204ENST00000348259 VAMP8Q9BV40 100 aa6.73□□□□□ -1.33
MRPL55-204ENST00000348259 IGIPA6NJ69 53 aa6.72□□□□□ -1.33
MRPL55-204ENST00000348259 TSTD3H0UI37 97 aa6.72□□□□□ -1.33
MRPL55-204ENST00000348259 RPL36AP83881 106 aaKnown RBP6.72□□□□□ -1.33
MRPL55-204ENST00000348259 FHL2Q14192 279 aa6.72□□□□□ -1.33
MRPL55-204ENST00000348259 DAZ4Q86SG3 579 aaKnown RBP6.72□□□□□ -1.33
MRPL55-204ENST00000348259 SLC25A29Q8N8R3 303 aa6.72□□□□□ -1.33
MRPL55-204ENST00000348259 C20orf203Q8NBC4 194 aa6.72□□□□□ -1.33
MRPL55-204ENST00000348259 ZNRF2Q8NHG8 242 aa6.72□□□□□ -1.33
MRPL55-204ENST00000348259 RPL36ALQ969Q0 106 aaKnown RBP6.72□□□□□ -1.33
MRPL55-204ENST00000348259 SCGB3A1Q96QR1 104 aa6.72□□□□□ -1.33
MRPL55-204ENST00000348259 DAZ3Q9NR90 486 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms