RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 CST9LP1Q5W188 147 aa10.26□□□□□ -0.77
TRA2B-202ENST00000342294 STOML3Q8TAV4 291 aa10.26□□□□□ -0.77
TRA2B-202ENST00000342294 LINC00526Q96FQ7 95 aa10.26□□□□□ -0.77
TRA2B-202ENST00000342294 CARD19Q96LW7 228 aa10.26□□□□□ -0.77
TRA2B-202ENST00000342294 NIT2Q9NQR4 276 aa10.26□□□□□ -0.77
TRA2B-202ENST00000342294 A0A1W2PNN7 141 aa10.25□□□□□ -0.77
TRA2B-202ENST00000342294 MAP1LC3B2A6NCE7 125 aa10.25□□□□□ -0.77
TRA2B-202ENST00000342294 S100A9P06702 114 aaKnown RBP10.25□□□□□ -0.77
TRA2B-202ENST00000342294 PTTG1IPP53801 180 aa10.25□□□□□ -0.77
TRA2B-202ENST00000342294 CACNG7P62955 275 aa10.25□□□□□ -0.77
TRA2B-202ENST00000342294 BAGE2Q86Y30 109 aa10.25□□□□□ -0.77
TRA2B-202ENST00000342294 S100ZQ8WXG8 99 aa10.25□□□□□ -0.77
TRA2B-202ENST00000342294 MAP1LC3BQ9GZQ8 125 aa10.25□□□□□ -0.77
TRA2B-202ENST00000342294 IGLC6P0CF74 106 aa10.24□□□□□ -0.77
TRA2B-202ENST00000342294 AKR1C8PQ5T2L2 129 aa10.23□□□□□ -0.77
TRA2B-202ENST00000342294 BORCS7-ASMTA0A0B4J1R7 106 aa10.22□□□□□ -0.77
TRA2B-202ENST00000342294 IGHV1-58A0A0C4DH39 117 aa10.22□□□□□ -0.77
TRA2B-202ENST00000342294 PAGE4O60829 102 aa10.22□□□□□ -0.77
TRA2B-202ENST00000342294 MT-ND6P03923 174 aa10.22□□□□□ -0.77
TRA2B-202ENST00000342294 SYCNQ0VAF6 134 aa10.22□□□□□ -0.77
TRA2B-202ENST00000342294 PRR4Q16378 134 aa10.21□□□□□ -0.77
TRA2B-202ENST00000342294 Q5BKY6 102 aa10.21□□□□□ -0.77
TRA2B-202ENST00000342294 NDUFA13Q9P0J0 144 aa10.21□□□□□ -0.77
TRA2B-202ENST00000342294 SCO2A0A1W2PP80 73 aa10.2□□□□□ -0.78
TRA2B-202ENST00000342294 NTF3P20783 257 aa10.2□□□□□ -0.78
TRA2B-202ENST00000342294 XCL1P47992 114 aa10.2□□□□□ -0.78
TRA2B-202ENST00000342294 GAGE2BQ13066 116 aa10.2□□□□□ -0.78
TRA2B-202ENST00000342294 C1orf137Q5JT78 98 aa10.2□□□□□ -0.78
TRA2B-202ENST00000342294 AMMECR1LQ6DCA0 310 aa10.2□□□□□ -0.78
TRA2B-202ENST00000342294 FER1L6-AS1Q8NA97 138 aa10.2□□□□□ -0.78
TRA2B-202ENST00000342294 LOC107984640A0A0U1RRK4 108 aa10.19□□□□□ -0.78
TRA2B-202ENST00000342294 OR5A1Q8NGJ0 315 aa10.19□□□□□ -0.78
TRA2B-202ENST00000342294 DIRC1Q969H9 104 aa10.19□□□□□ -0.78
TRA2B-202ENST00000342294 TPPP3Q9BW30 176 aa10.19□□□□□ -0.78
TRA2B-202ENST00000342294 IGLV1-50A0A075B6I6 118 aa10.18□□□□□ -0.78
TRA2B-202ENST00000342294 H7C423 109 aa10.18□□□□□ -0.78
TRA2B-202ENST00000342294 IGLV7-43P04211 117 aa10.18□□□□□ -0.78
TRA2B-202ENST00000342294 FGF6P10767 208 aa10.18□□□□□ -0.78
TRA2B-202ENST00000342294 C9orf116Q5BN46 136 aaPredicted RBP10.18□□□□□ -0.78
TRA2B-202ENST00000342294 RNASEKQ6P5S7 137 aaKnown RBP10.18□□□□□ -0.78
TRA2B-202ENST00000342294 Q6ZNX1 250 aa10.18□□□□□ -0.78
TRA2B-202ENST00000342294 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.17□□□□□ -0.78
TRA2B-202ENST00000342294 LINC00959A0A1B0GUT2 108 aa10.17□□□□□ -0.78
TRA2B-202ENST00000342294 IGKV2-29A2NJV5 120 aaPredicted RBP10.17□□□□□ -0.78
TRA2B-202ENST00000342294 CCL25O15444 150 aa10.17□□□□□ -0.78
TRA2B-202ENST00000342294 H0Y9J4 135 aa10.16□□□□□ -0.78
TRA2B-202ENST00000342294 ZNF561-AS1K7EIQ3 104 aa10.16□□□□□ -0.78
TRA2B-202ENST00000342294 NCR2O95944 276 aa10.16□□□□□ -0.78
TRA2B-202ENST00000342294 KRTAP1-4P0C5Y4 121 aa10.16□□□□□ -0.78
TRA2B-202ENST00000342294 TRGC1P0CF51 173 aa10.16□□□□□ -0.78
TRA2B-202ENST00000342294 TMUB2Q71RG4 321 aa10.16□□□□□ -0.78
TRA2B-202ENST00000342294 PHF5AQ7RTV0 110 aaKnown RBP10.16□□□□□ -0.78
TRA2B-202ENST00000342294 ALG5Q9Y673 324 aa10.16□□□□□ -0.78
TRA2B-202ENST00000342294 F2Z2F3 143 aa10.15□□□□□ -0.78
TRA2B-202ENST00000342294 BCL2P10415 239 aa10.15□□□□□ -0.78
TRA2B-202ENST00000342294 CAMPP49913 170 aa10.15□□□□□ -0.78
TRA2B-202ENST00000342294 RPS20P60866 119 aaKnown RBP10.15□□□□□ -0.78
TRA2B-202ENST00000342294 GATD1Q8NB37 220 aa10.15□□□□□ -0.78
TRA2B-202ENST00000342294 OR2D3Q8NGH3 330 aa10.15□□□□□ -0.78
TRA2B-202ENST00000342294 ZNF25P17030 456 aaPredicted RBP10.14□□□□□ -0.79
TRA2B-202ENST00000342294 NUP35Q8NFH5 326 aa10.14□□□□□ -0.79
TRA2B-202ENST00000342294 IGLV4-69A0A075B6H9 119 aa10.13□□□□□ -0.79
TRA2B-202ENST00000342294 C19orf71A6NCJ1 209 aa10.13□□□□□ -0.79
TRA2B-202ENST00000342294 RPL35P42766 123 aaKnown RBP10.13□□□□□ -0.79
TRA2B-202ENST00000342294 CD164L2Q6UWJ8 174 aa10.13□□□□□ -0.79
TRA2B-202ENST00000342294 LYZL1Q6UWQ5 148 aa10.13□□□□□ -0.79
TRA2B-202ENST00000342294 ISOC2Q96AB3 205 aa10.13□□□□□ -0.79
TRA2B-202ENST00000342294 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.12□□□□□ -0.79
TRA2B-202ENST00000342294 APOMO95445 188 aa10.12□□□□□ -0.79
TRA2B-202ENST00000342294 APCSP02743 223 aa10.12□□□□□ -0.79
TRA2B-202ENST00000342294 DEFA1P59665 94 aa10.12□□□□□ -0.79
TRA2B-202ENST00000342294 MEF2BQ02080 365 aaPredicted RBP10.12□□□□□ -0.79
TRA2B-202ENST00000342294 KRTAP11-1Q8IUC1 163 aa10.12□□□□□ -0.79
TRA2B-202ENST00000342294 MBD3L1Q8WWY6 194 aa10.12□□□□□ -0.79
TRA2B-202ENST00000342294 CYTL1Q9NRR1 136 aa10.12□□□□□ -0.79
TRA2B-202ENST00000342294 PFDN1O60925 122 aa10.11□□□□□ -0.79
TRA2B-202ENST00000342294 FXYD6-FXYD2A0A087WZ82 144 aa10.1□□□□□ -0.79
TRA2B-202ENST00000342294 SS18Q15532 418 aa10.1□□□□□ -0.79
TRA2B-202ENST00000342294 C9orf62Q8N4C0 152 aa10.1□□□□□ -0.79
TRA2B-202ENST00000342294 SFT2D1Q8WV19 159 aa10.1□□□□□ -0.79
TRA2B-202ENST00000342294 RPL39LQ96EH5 51 aaKnown RBP10.1□□□□□ -0.79
TRA2B-202ENST00000342294 GIPP09681 153 aaPredicted RBP10.09□□□□□ -0.79
TRA2B-202ENST00000342294 TMEM101Q96IK0 257 aa10.09□□□□□ -0.79
TRA2B-202ENST00000342294 BTF3L4Q96K17 158 aa10.09□□□□□ -0.79
TRA2B-202ENST00000342294 A0A1B0GV50 99 aa10.08□□□□□ -0.8
TRA2B-202ENST00000342294 XKRY2A2RUG3 117 aa10.08□□□□□ -0.8
TRA2B-202ENST00000342294 ESDP10768 282 aa10.08□□□□□ -0.8
TRA2B-202ENST00000342294 CTRLP40313 264 aa10.08□□□□□ -0.8
TRA2B-202ENST00000342294 EIF5AP63241 154 aaKnown RBP10.08□□□□□ -0.8
TRA2B-202ENST00000342294 C11orf52Q96A22 123 aa10.08□□□□□ -0.8
TRA2B-202ENST00000342294 CAMK2N2Q96S95 79 aa10.08□□□□□ -0.8
TRA2B-202ENST00000342294 CNFNQ9BYD5 112 aa10.08□□□□□ -0.8
TRA2B-202ENST00000342294 CDC42SE2Q9NRR3 84 aa10.08□□□□□ -0.8
TRA2B-202ENST00000342294 A0A087WZ39 114 aa10.07□□□□□ -0.8
TRA2B-202ENST00000342294 TRAV1-1A0A0B4J248 108 aa10.07□□□□□ -0.8
TRA2B-202ENST00000342294 SDHAF1A6NFY7 115 aa10.07□□□□□ -0.8
TRA2B-202ENST00000342294 IFNA1P01562 189 aa10.07□□□□□ -0.8
TRA2B-202ENST00000342294 RPL13AP40429 203 aaKnown RBP10.07□□□□□ -0.8
TRA2B-202ENST00000342294 RPL18AQ02543 176 aaKnown RBP10.07□□□□□ -0.8
TRA2B-202ENST00000342294 CENPWQ5EE01 88 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms