RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 MARVELD1Q9BSK0 173 aa9.88□□□□□ -0.83
NECTIN1-202ENST00000340882 GAGE2BQ13066 116 aa9.87□□□□□ -0.83
NECTIN1-202ENST00000340882 CST9LP1Q5W188 147 aa9.87□□□□□ -0.83
NECTIN1-202ENST00000340882 RPL7L1Q6DKI1 246 aaKnown RBP9.87□□□□□ -0.83
NECTIN1-202ENST00000340882 COTL1Q14019 142 aa9.86□□□□□ -0.83
NECTIN1-202ENST00000340882 PHF5AQ7RTV0 110 aaKnown RBP9.86□□□□□ -0.83
NECTIN1-202ENST00000340882 NIT2Q9NQR4 276 aa9.86□□□□□ -0.83
NECTIN1-202ENST00000340882 XCL1P47992 114 aa9.85□□□□□ -0.83
NECTIN1-202ENST00000340882 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.84□□□□□ -0.83
NECTIN1-202ENST00000340882 IGKV2-29A2NJV5 120 aaPredicted RBP9.84□□□□□ -0.83
NECTIN1-202ENST00000340882 MAP1LC3B2A6NCE7 125 aa9.84□□□□□ -0.83
NECTIN1-202ENST00000340882 KRTAP1-4P0C5Y4 121 aa9.84□□□□□ -0.83
NECTIN1-202ENST00000340882 FHITP49789 147 aa9.84□□□□□ -0.83
NECTIN1-202ENST00000340882 SYCNQ0VAF6 134 aa9.84□□□□□ -0.83
NECTIN1-202ENST00000340882 Q5BKY6 102 aa9.84□□□□□ -0.83
NECTIN1-202ENST00000340882 C9orf116Q5BN46 136 aaPredicted RBP9.84□□□□□ -0.83
NECTIN1-202ENST00000340882 KRTAP11-1Q8IUC1 163 aa9.84□□□□□ -0.83
NECTIN1-202ENST00000340882 STOML3Q8TAV4 291 aa9.84□□□□□ -0.83
NECTIN1-202ENST00000340882 TPPP3Q9BW30 176 aa9.84□□□□□ -0.83
NECTIN1-202ENST00000340882 MAP1LC3BQ9GZQ8 125 aa9.84□□□□□ -0.83
NECTIN1-202ENST00000340882 IGHV1-58A0A0C4DH39 117 aa9.83□□□□□ -0.84
NECTIN1-202ENST00000340882 SCO2A0A1W2PP80 73 aa9.83□□□□□ -0.84
NECTIN1-202ENST00000340882 UPK1BO75841 260 aa9.83□□□□□ -0.84
NECTIN1-202ENST00000340882 IGLV7-43P04211 117 aa9.83□□□□□ -0.84
NECTIN1-202ENST00000340882 IGLC6P0CF74 106 aa9.83□□□□□ -0.84
NECTIN1-202ENST00000340882 BCL2P10415 239 aa9.83□□□□□ -0.84
NECTIN1-202ENST00000340882 Q6ZNX1 250 aa9.83□□□□□ -0.84
NECTIN1-202ENST00000340882 BAGE2Q86Y30 109 aa9.83□□□□□ -0.84
NECTIN1-202ENST00000340882 FER1L6-AS1Q8NA97 138 aa9.83□□□□□ -0.84
NECTIN1-202ENST00000340882 DIRC1Q969H9 104 aa9.83□□□□□ -0.84
NECTIN1-202ENST00000340882 PKIGQ9Y2B9 76 aa9.83□□□□□ -0.84
NECTIN1-202ENST00000340882 H0Y9J4 135 aa9.82□□□□□ -0.84
NECTIN1-202ENST00000340882 CCL25O15444 150 aa9.82□□□□□ -0.84
NECTIN1-202ENST00000340882 PAGE4O60829 102 aa9.82□□□□□ -0.84
NECTIN1-202ENST00000340882 RNASEKQ6P5S7 137 aaKnown RBP9.82□□□□□ -0.84
NECTIN1-202ENST00000340882 TCEAL7Q9BRU2 100 aa9.82□□□□□ -0.84
NECTIN1-202ENST00000340882 LOC107984640A0A0U1RRK4 108 aa9.81□□□□□ -0.84
NECTIN1-202ENST00000340882 NTF3P20783 257 aa9.81□□□□□ -0.84
NECTIN1-202ENST00000340882 AMMECR1LQ6DCA0 310 aa9.81□□□□□ -0.84
NECTIN1-202ENST00000340882 MED28Q9H204 178 aa9.81□□□□□ -0.84
NECTIN1-202ENST00000340882 MUC17Q685J3 4493 aa9.81□□□□□ -0.84
NECTIN1-202ENST00000340882 IGLV1-50A0A075B6I6 118 aa9.8□□□□□ -0.84
NECTIN1-202ENST00000340882 LINC00959A0A1B0GUT2 108 aa9.8□□□□□ -0.84
NECTIN1-202ENST00000340882 FGF6P10767 208 aa9.8□□□□□ -0.84
NECTIN1-202ENST00000340882 DEFA1P59665 94 aa9.8□□□□□ -0.84
NECTIN1-202ENST00000340882 OR5A1Q8NGJ0 315 aa9.8□□□□□ -0.84
NECTIN1-202ENST00000340882 ZNF561-AS1K7EIQ3 104 aa9.79□□□□□ -0.84
NECTIN1-202ENST00000340882 CAMPP49913 170 aa9.79□□□□□ -0.84
NECTIN1-202ENST00000340882 AKR1C8PQ5T2L2 129 aa9.79□□□□□ -0.84
NECTIN1-202ENST00000340882 IGLV4-69A0A075B6H9 119 aa9.78□□□□□ -0.84
NECTIN1-202ENST00000340882 S100A9P06702 114 aaKnown RBP9.78□□□□□ -0.84
NECTIN1-202ENST00000340882 GATD1Q8NB37 220 aa9.78□□□□□ -0.84
NECTIN1-202ENST00000340882 NUP35Q8NFH5 326 aa9.78□□□□□ -0.84
NECTIN1-202ENST00000340882 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.77□□□□□ -0.85
NECTIN1-202ENST00000340882 MEF2BQ02080 365 aaPredicted RBP9.77□□□□□ -0.85
NECTIN1-202ENST00000340882 BORCS7-ASMTA0A0B4J1R7 106 aa9.76□□□□□ -0.85
NECTIN1-202ENST00000340882 S100ZQ8WXG8 99 aa9.76□□□□□ -0.85
NECTIN1-202ENST00000340882 RPL39LQ96EH5 51 aaKnown RBP9.76□□□□□ -0.85
NECTIN1-202ENST00000340882 LYZL1Q6UWQ5 148 aa9.75□□□□□ -0.85
NECTIN1-202ENST00000340882 TMUB2Q71RG4 321 aa9.75□□□□□ -0.85
NECTIN1-202ENST00000340882 OR2D3Q8NGH3 330 aa9.75□□□□□ -0.85
NECTIN1-202ENST00000340882 ALG5Q9Y673 324 aa9.75□□□□□ -0.85
NECTIN1-202ENST00000340882 A0A087WZ39 114 aa9.74□□□□□ -0.85
NECTIN1-202ENST00000340882 A0A1B0GV50 99 aa9.74□□□□□ -0.85
NECTIN1-202ENST00000340882 H7C423 109 aa9.74□□□□□ -0.85
NECTIN1-202ENST00000340882 APOMO95445 188 aa9.74□□□□□ -0.85
NECTIN1-202ENST00000340882 TSPAN13O95857 204 aa9.74□□□□□ -0.85
NECTIN1-202ENST00000340882 TRGC1P0CF51 173 aa9.74□□□□□ -0.85
NECTIN1-202ENST00000340882 RPL18AQ02543 176 aaKnown RBP9.74□□□□□ -0.85
NECTIN1-202ENST00000340882 OPRPNQ99935 248 aaPredicted RBP9.74□□□□□ -0.85
NECTIN1-202ENST00000340882 FAM168BA1KXE4 195 aa9.73□□□□□ -0.85
NECTIN1-202ENST00000340882 APCSP02743 223 aa9.73□□□□□ -0.85
NECTIN1-202ENST00000340882 RPL35P42766 123 aaKnown RBP9.73□□□□□ -0.85
NECTIN1-202ENST00000340882 EIF5AP63241 154 aaKnown RBP9.73□□□□□ -0.85
NECTIN1-202ENST00000340882 CD164L2Q6UWJ8 174 aa9.73□□□□□ -0.85
NECTIN1-202ENST00000340882 LINC00299Q6ZSB3 139 aa9.73□□□□□ -0.85
NECTIN1-202ENST00000340882 C19orf71A6NCJ1 209 aa9.72□□□□□ -0.85
NECTIN1-202ENST00000340882 NCR2O95944 276 aa9.72□□□□□ -0.85
NECTIN1-202ENST00000340882 UBE2D1P51668 147 aa9.72□□□□□ -0.85
NECTIN1-202ENST00000340882 ISOC2Q96AB3 205 aa9.72□□□□□ -0.85
NECTIN1-202ENST00000340882 CAMK2N2Q96S95 79 aa9.72□□□□□ -0.85
NECTIN1-202ENST00000340882 ZNF25P17030 456 aaPredicted RBP9.71□□□□□ -0.86
NECTIN1-202ENST00000340882 RPS20P60866 119 aaKnown RBP9.71□□□□□ -0.86
NECTIN1-202ENST00000340882 SS18Q15532 418 aa9.71□□□□□ -0.86
NECTIN1-202ENST00000340882 CYTL1Q9NRR1 136 aa9.71□□□□□ -0.86
NECTIN1-202ENST00000340882 NDUFA13Q9P0J0 144 aa9.71□□□□□ -0.86
NECTIN1-202ENST00000340882 FSIP2Q5CZC0 6907 aa9.71□□□□□ -0.86
NECTIN1-202ENST00000340882 TRAV1-1A0A0B4J248 108 aa9.7□□□□□ -0.86
NECTIN1-202ENST00000340882 F2Z2F3 143 aa9.7□□□□□ -0.86
NECTIN1-202ENST00000340882 BCL2L11O43521 198 aa9.7□□□□□ -0.86
NECTIN1-202ENST00000340882 CRCT1Q9UGL9 99 aa9.7□□□□□ -0.86
NECTIN1-202ENST00000340882 FXYD6-FXYD2A0A087WZ82 144 aa9.69□□□□□ -0.86
NECTIN1-202ENST00000340882 SDHAF1A6NFY7 115 aa9.69□□□□□ -0.86
NECTIN1-202ENST00000340882 FOXA3P55318 350 aaPredicted RBP9.69□□□□□ -0.86
NECTIN1-202ENST00000340882 KRTAP7-1Q8IUC3 87 aa9.69□□□□□ -0.86
NECTIN1-202ENST00000340882 SFT2D1Q8WV19 159 aa9.69□□□□□ -0.86
NECTIN1-202ENST00000340882 TMEM101Q96IK0 257 aa9.69□□□□□ -0.86
NECTIN1-202ENST00000340882 BTF3L4Q96K17 158 aa9.69□□□□□ -0.86
NECTIN1-202ENST00000340882 CDC42SE2Q9NRR3 84 aa9.69□□□□□ -0.86
NECTIN1-202ENST00000340882 PFDN1O60925 122 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms