RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 VCX2Q9H322 139 aa7.39□□□□□ -1.23
RBFOX1-202ENST00000340209 MGAM2Q2M2H8 2515 aa7.39□□□□□ -1.23
RBFOX1-202ENST00000340209 I3L3M4 83 aa7.39□□□□□ -1.23
RBFOX1-202ENST00000340209 SRSF9Q13242 221 aaKnown RBP eCLIP7.39□□□□□ -1.23
RBFOX1-202ENST00000340209 CFAP126Q5VTH2 177 aa7.39□□□□□ -1.23
RBFOX1-202ENST00000340209 CHAC1Q9BUX1 264 aa7.39□□□□□ -1.23
RBFOX1-202ENST00000340209 TRGV4A0A0C4DH28 118 aa7.39□□□□□ -1.23
RBFOX1-202ENST00000340209 H3BUT2 72 aa7.39□□□□□ -1.23
RBFOX1-202ENST00000340209 FHL3Q13643 280 aa7.39□□□□□ -1.23
RBFOX1-202ENST00000340209 SPXQ9BT56 116 aa7.39□□□□□ -1.23
RBFOX1-202ENST00000340209 A0A0J9YXV3 536 aa7.38□□□□□ -1.23
RBFOX1-202ENST00000340209 LOC100131303A0A0U1RQF7 123 aa7.38□□□□□ -1.23
RBFOX1-202ENST00000340209 A0A0U1RRA0 63 aa7.38□□□□□ -1.23
RBFOX1-202ENST00000340209 A8MWV9 139 aa7.38□□□□□ -1.23
RBFOX1-202ENST00000340209 POLR2KP53803 58 aaKnown RBP7.38□□□□□ -1.23
RBFOX1-202ENST00000340209 NPC2P61916 151 aa7.38□□□□□ -1.23
RBFOX1-202ENST00000340209 FBN1P35555 2871 aaKnown RBP7.38□□□□□ -1.23
RBFOX1-202ENST00000340209 CRLF1O75462 422 aa7.38□□□□□ -1.23
RBFOX1-202ENST00000340209 PLNP26678 52 aa7.38□□□□□ -1.23
RBFOX1-202ENST00000340209 DEFB135Q30KP9 77 aa7.38□□□□□ -1.23
RBFOX1-202ENST00000340209 TRBV25-1A0A075B6N4 114 aa7.37□□□□□ -1.23
RBFOX1-202ENST00000340209 AMMECR1LQ6DCA0 310 aa7.37□□□□□ -1.23
RBFOX1-202ENST00000340209 HHLA3Q9XRX5 114 aa7.37□□□□□ -1.23
RBFOX1-202ENST00000340209 H7C2G1 150 aa7.37□□□□□ -1.23
RBFOX1-202ENST00000340209 TSHBP01222 138 aa7.37□□□□□ -1.23
RBFOX1-202ENST00000340209 TRAV13-1A0A0B4J241 112 aa7.37□□□□□ -1.23
RBFOX1-202ENST00000340209 NXPH4O95158 308 aa7.37□□□□□ -1.23
RBFOX1-202ENST00000340209 PMVKQ15126 192 aa7.37□□□□□ -1.23
RBFOX1-202ENST00000340209 ORAOV1Q8WV07 137 aa7.37□□□□□ -1.23
RBFOX1-202ENST00000340209 FGF6P10767 208 aa7.36□□□□□ -1.23
RBFOX1-202ENST00000340209 FXYD2P54710 66 aa7.36□□□□□ -1.23
RBFOX1-202ENST00000340209 BOD1L2Q8IYS8 172 aa7.36□□□□□ -1.23
RBFOX1-202ENST00000340209 NEXN-AS1Q8NBZ9 246 aa7.36□□□□□ -1.23
RBFOX1-202ENST00000340209 DLEU1O43261 78 aa7.36□□□□□ -1.23
RBFOX1-202ENST00000340209 IGLV1-51P01701 117 aa7.36□□□□□ -1.23
RBFOX1-202ENST00000340209 HERVK_113P61574 105 aa7.36□□□□□ -1.23
RBFOX1-202ENST00000340209 TRAV2A0A0B4J234 112 aa7.35□□□□□ -1.23
RBFOX1-202ENST00000340209 A8MZ25 164 aa7.35□□□□□ -1.23
RBFOX1-202ENST00000340209 APOMO95445 188 aa7.35□□□□□ -1.23
RBFOX1-202ENST00000340209 COX11Q9Y6N1 276 aa7.35□□□□□ -1.23
RBFOX1-202ENST00000340209 TRAV25A0A0B4J276 109 aa7.35□□□□□ -1.23
RBFOX1-202ENST00000340209 NDUFA7O95182 113 aa7.35□□□□□ -1.23
RBFOX1-202ENST00000340209 C11orf72Q8NBR9 251 aa7.35□□□□□ -1.23
RBFOX1-202ENST00000340209 LINC00467Q9BRT7 94 aa7.35□□□□□ -1.23
RBFOX1-202ENST00000340209 CST9LQ9H4G1 147 aa7.35□□□□□ -1.23
RBFOX1-202ENST00000340209 A6NDN8 102 aa7.35□□□□□ -1.23
RBFOX1-202ENST00000340209 LGALS3P17931 250 aaKnown RBP7.35□□□□□ -1.23
RBFOX1-202ENST00000340209 MTURNQ8N3F0 131 aa7.35□□□□□ -1.23
RBFOX1-202ENST00000340209 POM121L12Q8N7R1 296 aa7.35□□□□□ -1.23
RBFOX1-202ENST00000340209 ZNF625Q96I27 306 aaPredicted RBP7.35□□□□□ -1.23
RBFOX1-202ENST00000340209 C16orf95Q9H693 158 aa7.35□□□□□ -1.23
RBFOX1-202ENST00000340209 HSD52Q0P140 79 aa7.34□□□□□ -1.23
RBFOX1-202ENST00000340209 C20orf203Q8NBC4 194 aa7.34□□□□□ -1.23
RBFOX1-202ENST00000340209 PLEKHB2Q96CS7 222 aa7.34□□□□□ -1.23
RBFOX1-202ENST00000340209 TRAV8-3A0A0A6YYJ7 113 aa7.34□□□□□ -1.23
RBFOX1-202ENST00000340209 A0A0J9YY99 117 aa7.34□□□□□ -1.23
RBFOX1-202ENST00000340209 TRBV27A0A0K0K1C4 114 aa7.34□□□□□ -1.23
RBFOX1-202ENST00000340209 Q6ZUT4 128 aa7.34□□□□□ -1.23
RBFOX1-202ENST00000340209 TAX1BP3O14907 124 aa7.33□□□□□ -1.24
RBFOX1-202ENST00000340209 PRSS2P07478 247 aa7.33□□□□□ -1.24
RBFOX1-202ENST00000340209 RPL36AP83881 106 aaKnown RBP7.33□□□□□ -1.24
RBFOX1-202ENST00000340209 RPL36ALQ969Q0 106 aaKnown RBP7.33□□□□□ -1.24
RBFOX1-202ENST00000340209 GEMIN7Q9H840 131 aaKnown RBP7.33□□□□□ -1.24
RBFOX1-202ENST00000340209 PKD1L1Q8TDX9 2849 aa7.33□□□□□ -1.24
RBFOX1-202ENST00000340209 UBE2L6O14933 153 aa7.33□□□□□ -1.24
RBFOX1-202ENST00000340209 SPINK8P0C7L1 97 aa7.33□□□□□ -1.24
RBFOX1-202ENST00000340209 CLPSL2Q6UWE3 100 aa7.33□□□□□ -1.24
RBFOX1-202ENST00000340209 NDUFA11Q86Y39 141 aa7.33□□□□□ -1.24
RBFOX1-202ENST00000340209 SLC25A29Q8N8R3 303 aa7.33□□□□□ -1.24
RBFOX1-202ENST00000340209 TMEM263Q8WUH6 116 aaKnown RBP7.33□□□□□ -1.24
RBFOX1-202ENST00000340209 GAGE6Q13070 117 aa7.32□□□□□ -1.24
RBFOX1-202ENST00000340209 CITED1Q99966 193 aa7.32□□□□□ -1.24
RBFOX1-202ENST00000340209 IGIPA6NJ69 53 aa7.32□□□□□ -1.24
RBFOX1-202ENST00000340209 A6NJY4 79 aa7.32□□□□□ -1.24
RBFOX1-202ENST00000340209 TMEM262E9PQX1 116 aa7.32□□□□□ -1.24
RBFOX1-202ENST00000340209 RHODO00212 210 aa7.32□□□□□ -1.24
RBFOX1-202ENST00000340209 OXLD1Q5BKU9 147 aa7.32□□□□□ -1.24
RBFOX1-202ENST00000340209 CLUHP3Q96NS8 147 aa7.32□□□□□ -1.24
RBFOX1-202ENST00000340209 CHCHD5Q9BSY4 110 aa7.32□□□□□ -1.24
RBFOX1-202ENST00000340209 IGLV4-3A0A075B6K6 122 aa7.32□□□□□ -1.24
RBFOX1-202ENST00000340209 MYMXA0A1B0GTQ4 84 aa7.32□□□□□ -1.24
RBFOX1-202ENST00000340209 RNASE8Q8TDE3 154 aaKnown RBP7.32□□□□□ -1.24
RBFOX1-202ENST00000340209 CCL25O15444 150 aa7.31□□□□□ -1.24
RBFOX1-202ENST00000340209 TMEM141Q96I45 108 aa7.31□□□□□ -1.24
RBFOX1-202ENST00000340209 C1QTNF4Q9BXJ3 329 aa7.31□□□□□ -1.24
RBFOX1-202ENST00000340209 C11orf68Q9H3H3 251 aaKnown RBP7.31□□□□□ -1.24
RBFOX1-202ENST00000340209 IGLV4-69A0A075B6H9 119 aa7.31□□□□□ -1.24
RBFOX1-202ENST00000340209 K7EQD1 137 aa7.31□□□□□ -1.24
RBFOX1-202ENST00000340209 PRB2P02812 416 aaPredicted RBP7.31□□□□□ -1.24
RBFOX1-202ENST00000340209 GIG44P09565 113 aaPredicted RBP7.31□□□□□ -1.24
RBFOX1-202ENST00000340209 TSPEAR-AS2P59090 65 aa7.31□□□□□ -1.24
RBFOX1-202ENST00000340209 TOMM7Q9P0U1 55 aa7.31□□□□□ -1.24
RBFOX1-202ENST00000340209 TRAV12-1A0A0B4J245 112 aa7.3□□□□□ -1.24
RBFOX1-202ENST00000340209 GAGE10A6NGK3 116 aa7.3□□□□□ -1.24
RBFOX1-202ENST00000340209 SMIM13P0DJ93 91 aa7.3□□□□□ -1.24
RBFOX1-202ENST00000340209 LINC00694P0DN24 101 aa7.3□□□□□ -1.24
RBFOX1-202ENST00000340209 RHOHQ15669 191 aa7.3□□□□□ -1.24
RBFOX1-202ENST00000340209 ZMAT4Q9H898 229 aa7.3□□□□□ -1.24
RBFOX1-202ENST00000340209 LOC107984156A0A0G2JMH3 177 aa7.3□□□□□ -1.24
RBFOX1-202ENST00000340209 TRBV6-5A0A0K0K1A5 114 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms