RNA–Protein interactions for RNA: ENST00000336233.9

LIPA-202, Transcript of lipase A, lysosomal acid type, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIPA, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIPA-202ENST00000336233 GAGE12JA6NER3 117 aa10.4□□□□□ -0.74
LIPA-202ENST00000336233 J3QQQ9 107 aa10.4□□□□□ -0.74
LIPA-202ENST00000336233 GAGE7O76087 117 aa10.4□□□□□ -0.74
LIPA-202ENST00000336233 GAGE12FP0CL80 117 aa10.4□□□□□ -0.74
LIPA-202ENST00000336233 GAGE12GP0CL81 117 aa10.4□□□□□ -0.74
LIPA-202ENST00000336233 GAGE12IP0CL82 117 aa10.4□□□□□ -0.74
LIPA-202ENST00000336233 GAGE4Q13068 117 aa10.4□□□□□ -0.74
LIPA-202ENST00000336233 SRSF9Q13242 221 aaKnown RBP eCLIP10.4□□□□□ -0.74
LIPA-202ENST00000336233 FHL3Q13643 280 aa10.39□□□□□ -0.75
LIPA-202ENST00000336233 DYNLRB2Q8TF09 96 aa10.39□□□□□ -0.75
LIPA-202ENST00000336233 OPRPNQ99935 248 aaPredicted RBP10.39□□□□□ -0.75
LIPA-202ENST00000336233 ZNF462Q96JM2 2506 aa10.39□□□□□ -0.75
LIPA-202ENST00000336233 ZNF22P17026 224 aaPredicted RBP10.39□□□□□ -0.75
LIPA-202ENST00000336233 C11orf72Q8NBR9 251 aa10.39□□□□□ -0.75
LIPA-202ENST00000336233 CRYBG3Q68DQ2 2970 aa10.39□□□□□ -0.75
LIPA-202ENST00000336233 BEAN1Q3B7T3 259 aa10.38□□□□□ -0.75
LIPA-202ENST00000336233 MAP1AP78559 2803 aaPredicted RBP10.38□□□□□ -0.75
LIPA-202ENST00000336233 H3BMG7 143 aa10.38□□□□□ -0.75
LIPA-202ENST00000336233 RHODO00212 210 aa10.38□□□□□ -0.75
LIPA-202ENST00000336233 IGHV3-30P01768 117 aa10.38□□□□□ -0.75
LIPA-202ENST00000336233 IGHV3-30-5P0DP03 117 aa10.38□□□□□ -0.75
LIPA-202ENST00000336233 LGALS3P17931 250 aaKnown RBP10.38□□□□□ -0.75
LIPA-202ENST00000336233 ZFAND6Q6FIF0 208 aa10.38□□□□□ -0.75
LIPA-202ENST00000336233 INSP01308 110 aa10.37□□□□□ -0.75
LIPA-202ENST00000336233 FAM104AQ969W3 186 aa10.37□□□□□ -0.75
LIPA-202ENST00000336233 ZANQ9Y493 2812 aa10.37□□□□□ -0.75
LIPA-202ENST00000336233 CFAP126Q5VTH2 177 aa10.37□□□□□ -0.75
LIPA-202ENST00000336233 Q6ZSV7 163 aa10.37□□□□□ -0.75
LIPA-202ENST00000336233 PRO0461Q9UI25 63 aa10.37□□□□□ -0.75
LIPA-202ENST00000336233 APOMO95445 188 aa10.37□□□□□ -0.75
LIPA-202ENST00000336233 DNAJC30Q96LL9 226 aa10.37□□□□□ -0.75
LIPA-202ENST00000336233 PROK1P58294 105 aa10.36□□□□□ -0.75
LIPA-202ENST00000336233 TRBV20-1A0A075B6N2 111 aa10.36□□□□□ -0.75
LIPA-202ENST00000336233 CD28P10747 220 aa10.36□□□□□ -0.75
LIPA-202ENST00000336233 KHDC1LQ5JSQ8 128 aa10.36□□□□□ -0.75
LIPA-202ENST00000336233 NDUFA11Q86Y39 141 aa10.36□□□□□ -0.75
LIPA-202ENST00000336233 RS1O15537 224 aa10.35□□□□□ -0.75
LIPA-202ENST00000336233 HTN1P15515 57 aa10.35□□□□□ -0.75
LIPA-202ENST00000336233 MRPS36P82909 103 aaKnown RBP10.35□□□□□ -0.75
LIPA-202ENST00000336233 POLQO75417 2590 aa10.35□□□□□ -0.75
LIPA-202ENST00000336233 NACAE9PAV3 2078 aa10.35□□□□□ -0.75
LIPA-202ENST00000336233 MXRA5Q9NR99 2828 aa10.35□□□□□ -0.75
LIPA-202ENST00000336233 IGHV3-73A0A0B4J1V6 119 aa10.35□□□□□ -0.75
LIPA-202ENST00000336233 A0A0J9YXV3 536 aa10.35□□□□□ -0.75
LIPA-202ENST00000336233 IGHV3-53P01767 116 aa10.35□□□□□ -0.75
LIPA-202ENST00000336233 UBE2D3P61077 147 aa10.35□□□□□ -0.75
LIPA-202ENST00000336233 UBE2D2P62837 147 aa10.35□□□□□ -0.75
LIPA-202ENST00000336233 FOXI1Q12951 378 aa10.35□□□□□ -0.75
LIPA-202ENST00000336233 SPANXA1Q9NS26 97 aa10.35□□□□□ -0.75
LIPA-202ENST00000336233 GAGE13Q4V321 117 aa10.34□□□□□ -0.75
LIPA-202ENST00000336233 Q6ZSN1 163 aa10.34□□□□□ -0.75
LIPA-202ENST00000336233 LINC01587Q99440 93 aa10.34□□□□□ -0.75
LIPA-202ENST00000336233 CHCHD7Q9BUK0 85 aa10.34□□□□□ -0.75
LIPA-202ENST00000336233 LRRK2Q5S007 2527 aa10.34□□□□□ -0.75
LIPA-202ENST00000336233 DNAJC9-AS1A6NH13 148 aa10.34□□□□□ -0.75
LIPA-202ENST00000336233 FAM208BQ5VWN6 2430 aa10.34□□□□□ -0.75
LIPA-202ENST00000336233 IL17DQ8TAD2 202 aa10.33□□□□□ -0.76
LIPA-202ENST00000336233 PRM2P04554 102 aa10.33□□□□□ -0.76
LIPA-202ENST00000336233 ODF3L2Q3SX64 289 aa10.33□□□□□ -0.76
LIPA-202ENST00000336233 LYRM7Q5U5X0 104 aa10.33□□□□□ -0.76
LIPA-202ENST00000336233 CFC1BP0CG36 223 aa10.32□□□□□ -0.76
LIPA-202ENST00000336233 CFC1P0CG37 223 aa10.32□□□□□ -0.76
LIPA-202ENST00000336233 PTPN13Q12923 2485 aa10.32□□□□□ -0.76
LIPA-202ENST00000336233 CSMD2Q7Z408 3487 aa10.32□□□□□ -0.76
LIPA-202ENST00000336233 UBE2D4Q9Y2X8 147 aa10.32□□□□□ -0.76
LIPA-202ENST00000336233 CREBBPQ92793 2442 aa10.32□□□□□ -0.76
LIPA-202ENST00000336233 NAV2Q8IVL1 2488 aa10.32□□□□□ -0.76
LIPA-202ENST00000336233 NDUFV3P56181 108 aaKnown RBP10.31□□□□□ -0.76
LIPA-202ENST00000336233 TINCRA0A1B0GVN0 87 aa10.31□□□□□ -0.76
LIPA-202ENST00000336233 C10orf126Q8N4M7 172 aa10.31□□□□□ -0.76
LIPA-202ENST00000336233 SORL1Q92673 2214 aa10.31□□□□□ -0.76
LIPA-202ENST00000336233 WIPF1O43516 503 aa10.3□□□□□ -0.76
LIPA-202ENST00000336233 Q9UF83 564 aa10.3□□□□□ -0.76
LIPA-202ENST00000336233 SMIM9A6NGZ8 99 aa10.3□□□□□ -0.76
LIPA-202ENST00000336233 TIMM21Q9BVV7 248 aa10.3□□□□□ -0.76
LIPA-202ENST00000336233 ZFYVE26Q68DK2 2539 aa10.3□□□□□ -0.76
LIPA-202ENST00000336233 IGHV3-30-3P0DP02 117 aa10.29□□□□□ -0.76
LIPA-202ENST00000336233 A0A0B4J2C4 111 aa10.29□□□□□ -0.76
LIPA-202ENST00000336233 C3orf56Q8N813 242 aa10.29□□□□□ -0.76
LIPA-202ENST00000336233 WFDC11Q8NEX6 87 aa10.29□□□□□ -0.76
LIPA-202ENST00000336233 ATP6V0E2Q8NHE4 81 aa10.29□□□□□ -0.76
LIPA-202ENST00000336233 PRO1854Q9UHT4 67 aa10.29□□□□□ -0.76
LIPA-202ENST00000336233 A0A0J9YXY3 114 aa10.28□□□□□ -0.76
LIPA-202ENST00000336233 CCL24O00175 119 aa10.28□□□□□ -0.76
LIPA-202ENST00000336233 C1orf158Q8N1D5 194 aa10.28□□□□□ -0.76
LIPA-202ENST00000336233 ESM1Q9NQ30 184 aa10.28□□□□□ -0.76
LIPA-202ENST00000336233 IGHV1-58A0A0C4DH39 117 aa10.28□□□□□ -0.76
LIPA-202ENST00000336233 CEMP1Q6PRD7 247 aaPredicted RBP10.28□□□□□ -0.76
LIPA-202ENST00000336233 STHQ8IWL8 128 aa10.28□□□□□ -0.76
LIPA-202ENST00000336233 CENPEQ02224 2701 aa10.27□□□□□ -0.77
LIPA-202ENST00000336233 IGHV3-64A0A075B6Q5 118 aa10.27□□□□□ -0.77
LIPA-202ENST00000336233 MEIG1Q5JSS6 88 aa10.27□□□□□ -0.77
LIPA-202ENST00000336233 TMEM263Q8WUH6 116 aaKnown RBP10.27□□□□□ -0.77
LIPA-202ENST00000336233 CITED2Q99967 270 aaPredicted RBP10.27□□□□□ -0.77
LIPA-202ENST00000336233 XCL2Q9UBD3 114 aa10.27□□□□□ -0.77
LIPA-202ENST00000336233 TEX15Q9BXT5 2789 aa10.27□□□□□ -0.77
LIPA-202ENST00000336233 LOC107984156A0A0G2JMH3 177 aa10.26□□□□□ -0.77
LIPA-202ENST00000336233 HIST2H2BDQ6DRA6 164 aa10.26□□□□□ -0.77
LIPA-202ENST00000336233 ARL17AQ8IVW1 177 aa10.26□□□□□ -0.77
LIPA-202ENST00000336233 LITAFQ99732 161 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms