RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 C6orf201Q7Z4U5 140 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 MOB3BQ86TA1 216 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 INO80EQ8NBZ0 244 aaPredicted RBP0.86□□□□□ -2.27
LINC00643-201ENST00000334389 OR8A1Q8NGG7 326 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 H1FXQ92522 213 aaKnown RBP0.86□□□□□ -2.27
LINC00643-201ENST00000334389 LINC01587Q99440 93 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 GINS4Q9BRT9 223 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 ATG5Q9H1Y0 275 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 CST9LQ9H4G1 147 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 CCL28Q9NRJ3 127 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 TMEM167BQ9NRX6 74 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 FAM30AQ9NZY2 134 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 NDUFA12Q9UI09 145 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 LAMTOR2Q9Y2Q5 125 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 TRGV11A0A075B6L2 103 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 IGKV1D-8A0A087WSZ0 117 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 A0A1B0GXF2 115 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 ZNF320A2RRD8 509 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 DIRC3C9JPN6 131 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 SYNGR2O43760 224 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 PPP1R17O96001 155 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 CXCL3P19876 107 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 PMCHP20382 165 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 PVALBP20472 110 aaPredicted RBP0.86□□□□□ -2.27
LINC00643-201ENST00000334389 CAMLGP49069 296 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 H2BFSP57053 126 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 FABP9Q0Z7S8 132 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 BTN1A1Q13410 526 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 PMVKQ15126 192 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 PMCHL1Q16048 86 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 PDZD11Q5EBL8 140 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 C6orf226Q5I0X4 101 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 SFTA2Q6UW10 78 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 FAM167A-AS1Q96KT0 104 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 OBSCN-AS1Q96MR7 158 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 ZNF331Q9NQX6 463 aaPredicted RBP0.86□□□□□ -2.27
LINC00643-201ENST00000334389 IL36RNQ9UBH0 155 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 UQCR10Q9UDW1 63 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 MDN1Q9NU22 5596 aa0.86□□□□□ -2.27
LINC00643-201ENST00000334389 TRBV19A0A075B6N1 114 aa0.85□□□□□ -2.27
LINC00643-201ENST00000334389 UBE2QL1A1L167 161 aa0.85□□□□□ -2.27
LINC00643-201ENST00000334389 GGTLC3B5MD39 225 aa0.85□□□□□ -2.27
LINC00643-201ENST00000334389 KRASP01116 189 aa0.85□□□□□ -2.27
LINC00643-201ENST00000334389 MT2AP02795 61 aa0.85□□□□□ -2.27
LINC00643-201ENST00000334389 PRB2P02812 416 aaPredicted RBP0.85□□□□□ -2.27
LINC00643-201ENST00000334389 MT-ND6P03923 174 aa0.85□□□□□ -2.27
LINC00643-201ENST00000334389 IGLV7-43P04211 117 aa0.85□□□□□ -2.27
LINC00643-201ENST00000334389 IGKV1-16P04430 117 aa0.85□□□□□ -2.27
LINC00643-201ENST00000334389 SNRPCP09234 159 aaKnown RBP0.85□□□□□ -2.27
LINC00643-201ENST00000334389 OR5AL1P0C617 328 aa0.85□□□□□ -2.27
LINC00643-201ENST00000334389 STAG3L2P0CL84 134 aa0.85□□□□□ -2.27
LINC00643-201ENST00000334389 TPT1P13693 172 aaKnown RBP0.85□□□□□ -2.27
LINC00643-201ENST00000334389 ZNF25P17030 456 aaPredicted RBP0.85□□□□□ -2.27
LINC00643-201ENST00000334389 NPPCP23582 126 aa0.85□□□□□ -2.27
LINC00643-201ENST00000334389 EDDM3BP56851 147 aa0.85□□□□□ -2.27
LINC00643-201ENST00000334389 SYNJ2BPP57105 145 aa0.85□□□□□ -2.27
LINC00643-201ENST00000334389 TAS2R45P59539 299 aa0.85□□□□□ -2.27
LINC00643-201ENST00000334389 C15orf32Q32M92 178 aa0.85□□□□□ -2.27
LINC00643-201ENST00000334389 OTPQ5XKR4 325 aa0.85□□□□□ -2.27
LINC00643-201ENST00000334389 CD164L2Q6UWJ8 174 aa0.85□□□□□ -2.27
LINC00643-201ENST00000334389 C2orf91Q6ZV80 131 aa0.85□□□□□ -2.27
LINC00643-201ENST00000334389 C5orf38Q86SI9 138 aa0.85□□□□□ -2.27
LINC00643-201ENST00000334389 SLC35G3Q8N808 338 aa0.85□□□□□ -2.27
LINC00643-201ENST00000334389 OR10D4PQ8NGN7 298 aa0.85□□□□□ -2.27
LINC00643-201ENST00000334389 DTD1Q8TEA8 209 aa0.85□□□□□ -2.27
LINC00643-201ENST00000334389 FMC1Q96HJ9 113 aa0.85□□□□□ -2.27
LINC00643-201ENST00000334389 SPRR2GQ9BYE4 73 aa0.85□□□□□ -2.27
LINC00643-201ENST00000334389 MANBALQ9NQG1 85 aa0.85□□□□□ -2.27
LINC00643-201ENST00000334389 NIT2Q9NQR4 276 aa0.85□□□□□ -2.27
LINC00643-201ENST00000334389 MRPL16Q9NX20 251 aaKnown RBP0.85□□□□□ -2.27
LINC00643-201ENST00000334389 TRAV18A0A075B6X5 111 aa0.85□□□□□ -2.27
LINC00643-201ENST00000334389 A0A1B0GV50 99 aa0.85□□□□□ -2.27
LINC00643-201ENST00000334389 C7orf77A4D0Y5 90 aa0.85□□□□□ -2.27
LINC00643-201ENST00000334389 C9JQL5 133 aa0.85□□□□□ -2.27
LINC00643-201ENST00000334389 E9PLD3 99 aa0.85□□□□□ -2.27
LINC00643-201ENST00000334389 F8W1H4 67 aa0.85□□□□□ -2.27
LINC00643-201ENST00000334389 UBE2D3P61077 147 aa0.85□□□□□ -2.27
LINC00643-201ENST00000334389 UBE2D2P62837 147 aa0.85□□□□□ -2.27
LINC00643-201ENST00000334389 RPL24P83731 157 aaKnown RBP0.85□□□□□ -2.27
LINC00643-201ENST00000334389 PLGLAQ15195 96 aa0.85□□□□□ -2.27
LINC00643-201ENST00000334389 RRN3P1Q2M238 152 aa0.85□□□□□ -2.27
LINC00643-201ENST00000334389 DEFB135Q30KP9 77 aa0.85□□□□□ -2.27
LINC00643-201ENST00000334389 AKR1C8PQ5T2L2 129 aa0.85□□□□□ -2.27
LINC00643-201ENST00000334389 FAM78BQ5VT40 261 aa0.85□□□□□ -2.27
LINC00643-201ENST00000334389 AMMECR1LQ6DCA0 310 aa0.85□□□□□ -2.27
LINC00643-201ENST00000334389 Q75L30 129 aa0.85□□□□□ -2.27
LINC00643-201ENST00000334389 ATP5L2Q7Z4Y8 100 aa0.85□□□□□ -2.27
LINC00643-201ENST00000334389 HMGN2P46Q86SG4 172 aa0.85□□□□□ -2.27
LINC00643-201ENST00000334389 TP53RKQ96S44 253 aa0.85□□□□□ -2.27
LINC00643-201ENST00000334389 CHMP1AQ9HD42 196 aaPredicted RBP0.85□□□□□ -2.27
LINC00643-201ENST00000334389 ENY2Q9NPA8 101 aa0.85□□□□□ -2.27
LINC00643-201ENST00000334389 DAZ3Q9NR90 486 aaKnown RBP0.85□□□□□ -2.27
LINC00643-201ENST00000334389 FZR1Q9UM11 496 aa0.85□□□□□ -2.27
LINC00643-201ENST00000334389 LOC107984156A0A0G2JMH3 177 aa0.85□□□□□ -2.27
LINC00643-201ENST00000334389 A8MWV9 139 aa0.85□□□□□ -2.27
LINC00643-201ENST00000334389 SYS1-DBNDD2H3BUS1 97 aa0.85□□□□□ -2.27
LINC00643-201ENST00000334389 K7ERU9 68 aa0.85□□□□□ -2.27
LINC00643-201ENST00000334389 HYPMO75409 117 aa0.85□□□□□ -2.27
LINC00643-201ENST00000334389 ERC2-IT1O76042 136 aa0.85□□□□□ -2.27
LINC00643-201ENST00000334389 MT-CO2P00403 227 aa0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 153.6 ms