RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 K7EQD1 137 aa4.92□□□□□ -1.62
PTCD2-201ENST00000308077 ATOH7Q8N100 152 aa4.92□□□□□ -1.62
PTCD2-201ENST00000308077 SLC25A29Q8N8R3 303 aa4.92□□□□□ -1.62
PTCD2-201ENST00000308077 VCYO14598 125 aa4.91□□□□□ -1.62
PTCD2-201ENST00000308077 TSHBP01222 138 aa4.91□□□□□ -1.62
PTCD2-201ENST00000308077 MAJINQ3KP22 176 aa4.91□□□□□ -1.62
PTCD2-201ENST00000308077 TEX43Q6ZNM6 134 aa4.91□□□□□ -1.62
PTCD2-201ENST00000308077 TRGV4A0A0C4DH28 118 aa4.91□□□□□ -1.62
PTCD2-201ENST00000308077 LOC100131303A0A0U1RQF7 123 aa4.91□□□□□ -1.62
PTCD2-201ENST00000308077 CIDEAO60543 219 aa4.91□□□□□ -1.62
PTCD2-201ENST00000308077 BTF3P20290 206 aaKnown RBP4.91□□□□□ -1.62
PTCD2-201ENST00000308077 ORMDL2Q53FV1 153 aa4.91□□□□□ -1.62
PTCD2-201ENST00000308077 DNAJC30Q96LL9 226 aa4.91□□□□□ -1.62
PTCD2-201ENST00000308077 TNFRSF18Q9Y5U5 241 aa4.91□□□□□ -1.62
PTCD2-201ENST00000308077 IGHV3-38A0A0C4DH36 116 aa4.9□□□□□ -1.62
PTCD2-201ENST00000308077 TRBV10-1A0A0K0K1A3 114 aa4.9□□□□□ -1.62
PTCD2-201ENST00000308077 I3L3M4 83 aa4.9□□□□□ -1.62
PTCD2-201ENST00000308077 K7EMI3 77 aa4.9□□□□□ -1.62
PTCD2-201ENST00000308077 NUDT3O95989 172 aa4.9□□□□□ -1.62
PTCD2-201ENST00000308077 DEFB121Q5J5C9 76 aa4.9□□□□□ -1.62
PTCD2-201ENST00000308077 ZNRF2Q8NHG8 242 aa4.9□□□□□ -1.62
PTCD2-201ENST00000308077 PHLDA1Q8WV24 401 aaPredicted RBP4.9□□□□□ -1.62
PTCD2-201ENST00000308077 KIR2DL4Q99706 377 aa4.9□□□□□ -1.62
PTCD2-201ENST00000308077 PMCHL2Q9BQD1 86 aa4.9□□□□□ -1.62
PTCD2-201ENST00000308077 HSPB8Q9UJY1 196 aa4.9□□□□□ -1.62
PTCD2-201ENST00000308077 ABCA13Q86UQ4 5058 aa4.9□□□□□ -1.63
PTCD2-201ENST00000308077 TRBV7-3A0A075B6L6 115 aa4.89□□□□□ -1.63
PTCD2-201ENST00000308077 TRBV6-4A0A1B0GX49 114 aa4.89□□□□□ -1.63
PTCD2-201ENST00000308077 SPART-AS1P0CW21 52 aa4.89□□□□□ -1.63
PTCD2-201ENST00000308077 DAD1P61803 113 aa4.89□□□□□ -1.63
PTCD2-201ENST00000308077 C2orf66Q6UXQ4 117 aa4.89□□□□□ -1.63
PTCD2-201ENST00000308077 TOMM6Q96B49 74 aa4.89□□□□□ -1.63
PTCD2-201ENST00000308077 GAGE12JA6NER3 117 aa4.89□□□□□ -1.63
PTCD2-201ENST00000308077 H0Y8G0 127 aa4.89□□□□□ -1.63
PTCD2-201ENST00000308077 SYS1-DBNDD2H3BUS1 97 aa4.89□□□□□ -1.63
PTCD2-201ENST00000308077 LINC00694P0DN24 101 aa4.89□□□□□ -1.63
PTCD2-201ENST00000308077 UBE2D3P61077 147 aa4.89□□□□□ -1.63
PTCD2-201ENST00000308077 UBE2D2P62837 147 aa4.89□□□□□ -1.63
PTCD2-201ENST00000308077 RPL39P62891 51 aaKnown RBP4.89□□□□□ -1.63
PTCD2-201ENST00000308077 GAGE1Q13065 139 aa4.89□□□□□ -1.63
PTCD2-201ENST00000308077 GAGE4Q13068 117 aa4.89□□□□□ -1.63
PTCD2-201ENST00000308077 GAGE5Q13069 117 aa4.89□□□□□ -1.63
PTCD2-201ENST00000308077 RHOHQ15669 191 aa4.89□□□□□ -1.63
PTCD2-201ENST00000308077 GAGE13Q4V321 117 aa4.89□□□□□ -1.63
PTCD2-201ENST00000308077 MRAPQ8TCY5 172 aa4.89□□□□□ -1.63
PTCD2-201ENST00000308077 TM2D3Q9BRN9 247 aa4.89□□□□□ -1.63
PTCD2-201ENST00000308077 C11orf68Q9H3H3 251 aaKnown RBP4.89□□□□□ -1.63
PTCD2-201ENST00000308077 HUWE1Q7Z6Z7 4374 aaKnown RBP4.89□□□□□ -1.63
PTCD2-201ENST00000308077 CRYBA4P53673 196 aa4.88□□□□□ -1.63
PTCD2-201ENST00000308077 PKIAP61925 76 aa4.88□□□□□ -1.63
PTCD2-201ENST00000308077 RPL36AP83881 106 aaKnown RBP4.88□□□□□ -1.63
PTCD2-201ENST00000308077 C12orf74Q32Q52 190 aa4.88□□□□□ -1.63
PTCD2-201ENST00000308077 RPL36ALQ969Q0 106 aaKnown RBP4.88□□□□□ -1.63
PTCD2-201ENST00000308077 IFI27L1Q96BM0 104 aa4.88□□□□□ -1.63
PTCD2-201ENST00000308077 TP73-AS1Q9UF72 201 aa4.88□□□□□ -1.63
PTCD2-201ENST00000308077 HHLA3Q9XRX5 114 aa4.88□□□□□ -1.63
PTCD2-201ENST00000308077 PAM16Q9Y3D7 125 aa4.88□□□□□ -1.63
PTCD2-201ENST00000308077 A0A0J9YWU9 116 aa4.88□□□□□ -1.63
PTCD2-201ENST00000308077 EIF4EBP3O60516 100 aaPredicted RBP4.88□□□□□ -1.63
PTCD2-201ENST00000308077 SPATA25Q9BR10 227 aa4.88□□□□□ -1.63
PTCD2-201ENST00000308077 CHCHD7Q9BUK0 85 aa4.88□□□□□ -1.63
PTCD2-201ENST00000308077 MAP1LC3CQ9BXW4 147 aa4.88□□□□□ -1.63
PTCD2-201ENST00000308077 CYSLTR1Q9Y271 337 aa4.88□□□□□ -1.63
PTCD2-201ENST00000308077 TEX48A0A1B0GUV7 120 aa4.87□□□□□ -1.63
PTCD2-201ENST00000308077 C3orf84H3BNL1 204 aa4.87□□□□□ -1.63
PTCD2-201ENST00000308077 ATP5G1P05496 136 aa4.87□□□□□ -1.63
PTCD2-201ENST00000308077 S100A12P80511 92 aa4.87□□□□□ -1.63
PTCD2-201ENST00000308077 PET117Q6UWS5 81 aa4.87□□□□□ -1.63
PTCD2-201ENST00000308077 C20orf203Q8NBC4 194 aa4.87□□□□□ -1.63
PTCD2-201ENST00000308077 PRADC1Q9BSG0 188 aa4.87□□□□□ -1.63
PTCD2-201ENST00000308077 PRO0255Q9UI72 69 aa4.87□□□□□ -1.63
PTCD2-201ENST00000308077 IGIPA6NJ69 53 aa4.87□□□□□ -1.63
PTCD2-201ENST00000308077 ATP5LO75964 103 aa4.87□□□□□ -1.63
PTCD2-201ENST00000308077 GYPEP15421 78 aa4.87□□□□□ -1.63
PTCD2-201ENST00000308077 DDTP30046 118 aa4.87□□□□□ -1.63
PTCD2-201ENST00000308077 COTL1Q14019 142 aa4.87□□□□□ -1.63
PTCD2-201ENST00000308077 LINC01545Q5VT33 79 aa4.87□□□□□ -1.63
PTCD2-201ENST00000308077 NTM-AS1Q6ZSK4 140 aa4.87□□□□□ -1.63
PTCD2-201ENST00000308077 DAZ4Q86SG3 579 aaKnown RBP4.87□□□□□ -1.63
PTCD2-201ENST00000308077 VSIG2Q96IQ7 327 aa4.87□□□□□ -1.63
PTCD2-201ENST00000308077 SCGB3A1Q96QR1 104 aa4.87□□□□□ -1.63
PTCD2-201ENST00000308077 DAZ3Q9NR90 486 aaKnown RBP4.87□□□□□ -1.63
PTCD2-201ENST00000308077 A0A0J9YY99 117 aa4.86□□□□□ -1.63
PTCD2-201ENST00000308077 hDV102S1A0JD36 115 aa4.86□□□□□ -1.63
PTCD2-201ENST00000308077 F5H768 121 aa4.86□□□□□ -1.63
PTCD2-201ENST00000308077 HTN3P15516 51 aa4.86□□□□□ -1.63
PTCD2-201ENST00000308077 ERASQ7Z444 233 aa4.86□□□□□ -1.63
PTCD2-201ENST00000308077 VAMP8Q9BV40 100 aa4.86□□□□□ -1.63
PTCD2-201ENST00000308077 ZMAT4Q9H898 229 aa4.86□□□□□ -1.63
PTCD2-201ENST00000308077 DNAH9Q9NYC9 4486 aa4.86□□□□□ -1.63
PTCD2-201ENST00000308077 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.85□□□□□ -1.63
PTCD2-201ENST00000308077 IGKV2-29A2NJV5 120 aaPredicted RBP4.85□□□□□ -1.63
PTCD2-201ENST00000308077 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.85□□□□□ -1.63
PTCD2-201ENST00000308077 PAX4O43316 350 aa4.85□□□□□ -1.63
PTCD2-201ENST00000308077 ODF1Q14990 250 aa4.85□□□□□ -1.63
PTCD2-201ENST00000308077 SPATA45Q537H7 98 aa4.85□□□□□ -1.63
PTCD2-201ENST00000308077 Q6ZTC4 211 aa4.85□□□□□ -1.63
PTCD2-201ENST00000308077 BAALCQ8WXS3 180 aa4.85□□□□□ -1.63
PTCD2-201ENST00000308077 FAM104AQ969W3 186 aa4.85□□□□□ -1.63
PTCD2-201ENST00000308077 TIMM17AQ99595 171 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms