RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 IGKV2-29A2NJV5 120 aaPredicted RBP10.55□□□□□ -0.72
SMG8-201ENST00000300917 K7ERJ3 54 aa10.55□□□□□ -0.72
SMG8-201ENST00000300917 ZNF479Q96JC4 524 aa10.55□□□□□ -0.72
SMG8-201ENST00000300917 PRADC1Q9BSG0 188 aa10.55□□□□□ -0.72
SMG8-201ENST00000300917 TRAV12-1A0A0B4J245 112 aa10.54□□□□□ -0.72
SMG8-201ENST00000300917 TRAV25A0A0B4J276 109 aa10.54□□□□□ -0.72
SMG8-201ENST00000300917 TRBV6-5A0A0K0K1A5 114 aa10.54□□□□□ -0.72
SMG8-201ENST00000300917 A8MWV9 139 aa10.54□□□□□ -0.72
SMG8-201ENST00000300917 FXYD2P54710 66 aa10.54□□□□□ -0.72
SMG8-201ENST00000300917 CST9LQ9H4G1 147 aa10.54□□□□□ -0.72
SMG8-201ENST00000300917 IGLV1-51P01701 117 aa10.53□□□□□ -0.72
SMG8-201ENST00000300917 PMVKQ15126 192 aa10.53□□□□□ -0.72
SMG8-201ENST00000300917 AMMECR1LQ6DCA0 310 aa10.53□□□□□ -0.72
SMG8-201ENST00000300917 HSD52Q0P140 79 aa10.53□□□□□ -0.72
SMG8-201ENST00000300917 IGLV4-69A0A075B6H9 119 aa10.52□□□□□ -0.72
SMG8-201ENST00000300917 C20orf203Q8NBC4 194 aa10.52□□□□□ -0.72
SMG8-201ENST00000300917 ZNRF2Q8NHG8 242 aa10.52□□□□□ -0.72
SMG8-201ENST00000300917 GAGE12BA1L429 117 aa10.52□□□□□ -0.73
SMG8-201ENST00000300917 GAGE7O76087 117 aa10.52□□□□□ -0.73
SMG8-201ENST00000300917 GIG44P09565 113 aaPredicted RBP10.52□□□□□ -0.73
SMG8-201ENST00000300917 GAGE12FP0CL80 117 aa10.52□□□□□ -0.73
SMG8-201ENST00000300917 GAGE12GP0CL81 117 aa10.52□□□□□ -0.73
SMG8-201ENST00000300917 GAGE12IP0CL82 117 aa10.52□□□□□ -0.73
SMG8-201ENST00000300917 H3BUT2 72 aa10.51□□□□□ -0.73
SMG8-201ENST00000300917 A0A0J9YXV3 536 aa10.51□□□□□ -0.73
SMG8-201ENST00000300917 ZNF815PA8K554 130 aa10.51□□□□□ -0.73
SMG8-201ENST00000300917 SCGB1D4Q6XE38 83 aa10.51□□□□□ -0.73
SMG8-201ENST00000300917 HIST1H4GQ99525 98 aa10.51□□□□□ -0.73
SMG8-201ENST00000300917 NHP2Q9NX24 153 aaKnown RBP10.51□□□□□ -0.73
SMG8-201ENST00000300917 RPL32P62910 135 aaKnown RBP10.5□□□□□ -0.73
SMG8-201ENST00000300917 PLEKHB2Q96CS7 222 aa10.5□□□□□ -0.73
SMG8-201ENST00000300917 UFSP1Q6NVU6 142 aa10.5□□□□□ -0.73
SMG8-201ENST00000300917 LINC00482Q8N8I6 264 aa10.5□□□□□ -0.73
SMG8-201ENST00000300917 VCX2Q9H322 139 aa10.5□□□□□ -0.73
SMG8-201ENST00000300917 TRGV2A0A075B6R0 118 aa10.49□□□□□ -0.73
SMG8-201ENST00000300917 NDUFA7O95182 113 aa10.49□□□□□ -0.73
SMG8-201ENST00000300917 C19orf73Q9NVV2 129 aa10.49□□□□□ -0.73
SMG8-201ENST00000300917 GAGE12JA6NER3 117 aa10.48□□□□□ -0.73
SMG8-201ENST00000300917 GAGE4Q13068 117 aa10.48□□□□□ -0.73
SMG8-201ENST00000300917 GAGE5Q13069 117 aa10.48□□□□□ -0.73
SMG8-201ENST00000300917 GAGE13Q4V321 117 aa10.48□□□□□ -0.73
SMG8-201ENST00000300917 TMEM141Q96I45 108 aa10.48□□□□□ -0.73
SMG8-201ENST00000300917 TIMM17AQ99595 171 aa10.48□□□□□ -0.73
SMG8-201ENST00000300917 SPXQ9BT56 116 aa10.48□□□□□ -0.73
SMG8-201ENST00000300917 IGLV4-3A0A075B6K6 122 aa10.48□□□□□ -0.73
SMG8-201ENST00000300917 MYMXA0A1B0GTQ4 84 aa10.48□□□□□ -0.73
SMG8-201ENST00000300917 A6NDN8 102 aa10.48□□□□□ -0.73
SMG8-201ENST00000300917 TSPEAR-AS2P59090 65 aa10.48□□□□□ -0.73
SMG8-201ENST00000300917 SEC11AP67812 179 aa10.48□□□□□ -0.73
SMG8-201ENST00000300917 RHOHQ15669 191 aa10.48□□□□□ -0.73
SMG8-201ENST00000300917 LINC00467Q9BRT7 94 aa10.48□□□□□ -0.73
SMG8-201ENST00000300917 SIVA1O15304 175 aa10.47□□□□□ -0.73
SMG8-201ENST00000300917 HERV-K104P63124 156 aa10.47□□□□□ -0.73
SMG8-201ENST00000300917 LOC100131303A0A0U1RQF7 123 aa10.47□□□□□ -0.73
SMG8-201ENST00000300917 TRAV26-1A0A087WT03 109 aa10.46□□□□□ -0.73
SMG8-201ENST00000300917 E9PLD3 99 aa10.46□□□□□ -0.73
SMG8-201ENST00000300917 RS1O15537 224 aa10.46□□□□□ -0.73
SMG8-201ENST00000300917 CRYBA4P53673 196 aa10.46□□□□□ -0.73
SMG8-201ENST00000300917 A4D1N5 150 aa10.46□□□□□ -0.74
SMG8-201ENST00000300917 DEFB130BP0DP73 79 aa10.46□□□□□ -0.74
SMG8-201ENST00000300917 DEFB130AP0DP74 79 aa10.46□□□□□ -0.74
SMG8-201ENST00000300917 RRN3P1Q2M238 152 aa10.46□□□□□ -0.74
SMG8-201ENST00000300917 BEAN1Q3B7T3 259 aa10.46□□□□□ -0.74
SMG8-201ENST00000300917 TMEM263Q8WUH6 116 aaKnown RBP10.46□□□□□ -0.74
SMG8-201ENST00000300917 RHODO00212 210 aa10.45□□□□□ -0.74
SMG8-201ENST00000300917 OCIAD2Q56VL3 154 aa10.45□□□□□ -0.74
SMG8-201ENST00000300917 NDUFA11Q86Y39 141 aa10.45□□□□□ -0.74
SMG8-201ENST00000300917 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.45□□□□□ -0.74
SMG8-201ENST00000300917 STAB1Q9NY15 2570 aa10.45□□□□□ -0.74
SMG8-201ENST00000300917 DEFB4AO15263 64 aa10.45□□□□□ -0.74
SMG8-201ENST00000300917 SRSF9Q13242 221 aaKnown RBP eCLIP10.45□□□□□ -0.74
SMG8-201ENST00000300917 SFTA2Q6UW10 78 aa10.45□□□□□ -0.74
SMG8-201ENST00000300917 Q6ZUT4 128 aa10.45□□□□□ -0.74
SMG8-201ENST00000300917 CEND1Q8N111 149 aa10.45□□□□□ -0.74
SMG8-201ENST00000300917 SLC25A29Q8N8R3 303 aa10.45□□□□□ -0.74
SMG8-201ENST00000300917 A8MZ25 164 aa10.44□□□□□ -0.74
SMG8-201ENST00000300917 HERVK_113P61574 105 aa10.44□□□□□ -0.74
SMG8-201ENST00000300917 CHCHD7Q9BUK0 85 aa10.44□□□□□ -0.74
SMG8-201ENST00000300917 DGAT2L7PQ6IED9 249 aa10.44□□□□□ -0.74
SMG8-201ENST00000300917 TRAV8-3A0A0A6YYJ7 113 aa10.43□□□□□ -0.74
SMG8-201ENST00000300917 CRLF1O75462 422 aa10.43□□□□□ -0.74
SMG8-201ENST00000300917 SMIM13P0DJ93 91 aa10.43□□□□□ -0.74
SMG8-201ENST00000300917 MAST4O15021 2626 aa10.43□□□□□ -0.74
SMG8-201ENST00000300917 HIGD1BQ9P298 99 aa10.43□□□□□ -0.74
SMG8-201ENST00000300917 FAM104AQ969W3 186 aa10.42□□□□□ -0.74
SMG8-201ENST00000300917 LINC00694P0DN24 101 aa10.42□□□□□ -0.74
SMG8-201ENST00000300917 H3BRM9 83 aa10.41□□□□□ -0.74
SMG8-201ENST00000300917 ZNF22P17026 224 aaPredicted RBP10.41□□□□□ -0.74
SMG8-201ENST00000300917 TRGV4A0A0C4DH28 118 aa10.41□□□□□ -0.74
SMG8-201ENST00000300917 IGKV3OR2-268A0A0C4DH90 116 aa10.41□□□□□ -0.74
SMG8-201ENST00000300917 PLAC8L1A1L4L8 177 aa10.41□□□□□ -0.74
SMG8-201ENST00000300917 GAGE10A6NGK3 116 aa10.41□□□□□ -0.74
SMG8-201ENST00000300917 C9orf118A6NHY6 69 aa10.41□□□□□ -0.74
SMG8-201ENST00000300917 LGALS3P17931 250 aaKnown RBP10.41□□□□□ -0.74
SMG8-201ENST00000300917 TRBV7-3A0A075B6L6 115 aa10.41□□□□□ -0.74
SMG8-201ENST00000300917 J3QQQ9 107 aa10.41□□□□□ -0.74
SMG8-201ENST00000300917 K7EQD1 137 aa10.4□□□□□ -0.74
SMG8-201ENST00000300917 RPL36AP83881 106 aaKnown RBP10.4□□□□□ -0.74
SMG8-201ENST00000300917 CSNK1G2-AS1Q8NCQ2 148 aa10.4□□□□□ -0.74
SMG8-201ENST00000300917 RPL36ALQ969Q0 106 aaKnown RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms