RNA–Protein interactions for RNA: ENST00000298564.14

TSPAN17-201, Transcript of tetraspanin 17, humanhuman

TSL 2 BASIC

Gene TSPAN17, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-201ENST00000298564 NHLRC4P0CG21 123 aaPredicted RBP13.11□□□□□ -0.31
TSPAN17-201ENST00000298564 SPINK13Q1W4C9 94 aa13.11□□□□□ -0.31
TSPAN17-201ENST00000298564 TMEM141Q96I45 108 aa13.11□□□□□ -0.31
TSPAN17-201ENST00000298564 ZNF702PQ9H963 129 aa13.11□□□□□ -0.31
TSPAN17-201ENST00000298564 TMEM223A0PJW6 202 aa13.11□□□□□ -0.31
TSPAN17-201ENST00000298564 ZNF22P17026 224 aaPredicted RBP13.11□□□□□ -0.31
TSPAN17-201ENST00000298564 SNRPD3P62318 126 aaKnown RBP13.11□□□□□ -0.31
TSPAN17-201ENST00000298564 TIMM17AQ99595 171 aa13.11□□□□□ -0.31
TSPAN17-201ENST00000298564 UBR5O95071 2799 aaPredicted RBP13.1□□□□□ -0.31
TSPAN17-201ENST00000298564 ZNF843Q8N446 348 aa13.1□□□□□ -0.31
TSPAN17-201ENST00000298564 DAND5Q8N907 189 aa13.1□□□□□ -0.31
TSPAN17-201ENST00000298564 ABCA12Q86UK0 2595 aa13.1□□□□□ -0.31
TSPAN17-201ENST00000298564 A0A0J9YX75 114 aa13.1□□□□□ -0.31
TSPAN17-201ENST00000298564 K7EQG2 157 aa13.1□□□□□ -0.31
TSPAN17-201ENST00000298564 NXPH4O95158 308 aa13.1□□□□□ -0.31
TSPAN17-201ENST00000298564 M0QY20 66 aa13.09□□□□□ -0.31
TSPAN17-201ENST00000298564 FSHBP01225 129 aa13.09□□□□□ -0.31
TSPAN17-201ENST00000298564 HOXD3P31249 432 aaPredicted RBP13.09□□□□□ -0.31
TSPAN17-201ENST00000298564 TRBV27A0A0K0K1C4 114 aa13.09□□□□□ -0.31
TSPAN17-201ENST00000298564 RHODO00212 210 aa13.09□□□□□ -0.31
TSPAN17-201ENST00000298564 TRIAP1O43715 76 aa13.09□□□□□ -0.31
TSPAN17-201ENST00000298564 ADAMTSL4-AS1Q5T5F5 129 aa13.09□□□□□ -0.31
TSPAN17-201ENST00000298564 VCX2Q9H322 139 aa13.09□□□□□ -0.31
TSPAN17-201ENST00000298564 KNCNA6PVL3 124 aa13.08□□□□□ -0.31
TSPAN17-201ENST00000298564 SNCGO76070 127 aa13.08□□□□□ -0.31
TSPAN17-201ENST00000298564 GAGE2BQ13066 116 aa13.08□□□□□ -0.31
TSPAN17-201ENST00000298564 GAGE2EQ4V326 116 aa13.08□□□□□ -0.31
TSPAN17-201ENST00000298564 GAGE2DQ9UEU5 116 aa13.08□□□□□ -0.31
TSPAN17-201ENST00000298564 TEX15Q9BXT5 2789 aa13.08□□□□□ -0.32
TSPAN17-201ENST00000298564 CCDC179H3BU77 68 aa13.08□□□□□ -0.32
TSPAN17-201ENST00000298564 CLEC2BQ92478 149 aa13.08□□□□□ -0.32
TSPAN17-201ENST00000298564 LINC01620Q4KN68 170 aa13.08□□□□□ -0.32
TSPAN17-201ENST00000298564 NAV2Q8IVL1 2488 aa13.07□□□□□ -0.32
TSPAN17-201ENST00000298564 A0A0J9YXY3 114 aa13.07□□□□□ -0.32
TSPAN17-201ENST00000298564 LEPROTO15243 131 aa13.07□□□□□ -0.32
TSPAN17-201ENST00000298564 TTC32Q5I0X7 151 aa13.07□□□□□ -0.32
TSPAN17-201ENST00000298564 POM121L12Q8N7R1 296 aa13.07□□□□□ -0.32
TSPAN17-201ENST00000298564 C3orf56Q8N813 242 aa13.07□□□□□ -0.32
TSPAN17-201ENST00000298564 UBE2E2Q96LR5 201 aa13.07□□□□□ -0.32
TSPAN17-201ENST00000298564 C18orf65Q6ZTR6 163 aa13.07□□□□□ -0.32
TSPAN17-201ENST00000298564 CITED1Q99966 193 aa13.07□□□□□ -0.32
TSPAN17-201ENST00000298564 NIPBLQ6KC79 2804 aaeCLIP13.07□□□□□ -0.32
TSPAN17-201ENST00000298564 A0A0U1RRA0 63 aa13.06□□□□□ -0.32
TSPAN17-201ENST00000298564 DEFB136Q30KP8 78 aa13.06□□□□□ -0.32
TSPAN17-201ENST00000298564 CR1P17927 2039 aa13.06□□□□□ -0.32
TSPAN17-201ENST00000298564 IGHV3-16A0A0C4DH30 117 aa13.06□□□□□ -0.32
TSPAN17-201ENST00000298564 LGALS9O00182 355 aa13.06□□□□□ -0.32
TSPAN17-201ENST00000298564 IGHV3-30-3P0DP02 117 aa13.06□□□□□ -0.32
TSPAN17-201ENST00000298564 IGLV4-3A0A075B6K6 122 aa13.05□□□□□ -0.32
TSPAN17-201ENST00000298564 DUX3Q96PT4 197 aa13.05□□□□□ -0.32
TSPAN17-201ENST00000298564 MYO9AB2RTY4 2548 aa13.05□□□□□ -0.32
TSPAN17-201ENST00000298564 TMEM262E9PQX1 116 aa13.05□□□□□ -0.32
TSPAN17-201ENST00000298564 DEFB113Q30KQ7 82 aa13.05□□□□□ -0.32
TSPAN17-201ENST00000298564 ODF3Q96PU9 254 aa13.05□□□□□ -0.32
TSPAN17-201ENST00000298564 AKAP9Q99996 3911 aa13.05□□□□□ -0.32
TSPAN17-201ENST00000298564 GAGE5Q13069 117 aa13.04□□□□□ -0.32
TSPAN17-201ENST00000298564 GAGE6Q13070 117 aa13.04□□□□□ -0.32
TSPAN17-201ENST00000298564 C20orf203Q8NBC4 194 aa13.04□□□□□ -0.32
TSPAN17-201ENST00000298564 SLURP1P55000 103 aa13.04□□□□□ -0.32
TSPAN17-201ENST00000298564 CD28P10747 220 aa13.03□□□□□ -0.32
TSPAN17-201ENST00000298564 NDUFV3P56181 108 aaKnown RBP13.03□□□□□ -0.32
TSPAN17-201ENST00000298564 ATXN8Q156A1 80 aa13.03□□□□□ -0.32
TSPAN17-201ENST00000298564 HIST2H2BDQ6DRA6 164 aa13.03□□□□□ -0.32
TSPAN17-201ENST00000298564 C15orf53Q8NAA6 179 aa13.03□□□□□ -0.32
TSPAN17-201ENST00000298564 C9orf85Q96MD7 179 aa13.03□□□□□ -0.32
TSPAN17-201ENST00000298564 Q96MF0 132 aa13.03□□□□□ -0.32
TSPAN17-201ENST00000298564 C2orf82Q6UX34 121 aa13.03□□□□□ -0.32
TSPAN17-201ENST00000298564 SVIPQ8NHG7 77 aa13.03□□□□□ -0.32
TSPAN17-201ENST00000298564 TRAV8-4A0A0B4J246 113 aa13.02□□□□□ -0.33
TSPAN17-201ENST00000298564 IGHV1OR15-1A0A075B7D0 117 aa13.02□□□□□ -0.33
TSPAN17-201ENST00000298564 IGHV3-38A0A0C4DH36 116 aa13.02□□□□□ -0.33
TSPAN17-201ENST00000298564 TIMM21Q9BVV7 248 aa13.02□□□□□ -0.33
TSPAN17-201ENST00000298564 RNF152Q8N8N0 203 aa13.01□□□□□ -0.33
TSPAN17-201ENST00000298564 ZNF469Q96JG9 3925 aaPredicted RBP13.01□□□□□ -0.33
TSPAN17-201ENST00000298564 M0R2P5 195 aa13.01□□□□□ -0.33
TSPAN17-201ENST00000298564 ZNF625Q96I27 306 aaPredicted RBP13.01□□□□□ -0.33
TSPAN17-201ENST00000298564 A0A0B4J2C4 111 aa13□□□□□ -0.33
TSPAN17-201ENST00000298564 I3L3M4 83 aa13□□□□□ -0.33
TSPAN17-201ENST00000298564 NF1P21359 2839 aa13□□□□□ -0.33
TSPAN17-201ENST00000298564 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.99□□□□□ -0.33
TSPAN17-201ENST00000298564 IGKV2-29A2NJV5 120 aaPredicted RBP12.99□□□□□ -0.33
TSPAN17-201ENST00000298564 H7C423 109 aa12.99□□□□□ -0.33
TSPAN17-201ENST00000298564 RPL32P62910 135 aaKnown RBP12.99□□□□□ -0.33
TSPAN17-201ENST00000298564 FAM104AQ969W3 186 aa12.99□□□□□ -0.33
TSPAN17-201ENST00000298564 SONP18583 2426 aaKnown RBP12.99□□□□□ -0.33
TSPAN17-201ENST00000298564 LITAFQ99732 161 aa12.99□□□□□ -0.33
TSPAN17-201ENST00000298564 H3BMM0 161 aa12.98□□□□□ -0.33
TSPAN17-201ENST00000298564 UBE2WQ96B02 151 aa12.98□□□□□ -0.33
TSPAN17-201ENST00000298564 NDUFA12Q9UI09 145 aa12.98□□□□□ -0.33
TSPAN17-201ENST00000298564 TRBV6-5A0A0K0K1A5 114 aa12.98□□□□□ -0.33
TSPAN17-201ENST00000298564 IFITM1P13164 125 aa12.98□□□□□ -0.33
TSPAN17-201ENST00000298564 NSUN5P1Q3KNT7 163 aa12.98□□□□□ -0.33
TSPAN17-201ENST00000298564 ICOSQ9Y6W8 199 aa12.98□□□□□ -0.33
TSPAN17-201ENST00000298564 WNK1Q9H4A3 2382 aa12.98□□□□□ -0.33
TSPAN17-201ENST00000298564 DEFB131AP59861 70 aa12.98□□□□□ -0.33
TSPAN17-201ENST00000298564 KHDC1LQ5JSQ8 128 aa12.98□□□□□ -0.33
TSPAN17-201ENST00000298564 EPG5Q9HCE0 2579 aa12.97□□□□□ -0.33
TSPAN17-201ENST00000298564 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.97□□□□□ -0.33
TSPAN17-201ENST00000298564 TRBV10-2A0A0K0K1G8 114 aa12.97□□□□□ -0.33
TSPAN17-201ENST00000298564 RBMY1A1P0DJD3 496 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms