RNA–Protein interactions for RNA: ENST00000296325.9

LRPAP1-201, Transcript of LDL receptor related protein associated protein 1, humanhuman

TSL 1 (best)

Gene LRPAP1, Length 1,078 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPAP1-201ENST00000296325 SYCNQ0VAF6 134 aa10.59□□□□□ -0.71
LRPAP1-201ENST00000296325 CCDC32Q9BV29 185 aa10.59□□□□□ -0.71
LRPAP1-201ENST00000296325 MUC17Q685J3 4493 aa10.58□□□□□ -0.72
LRPAP1-201ENST00000296325 IGHV1-58A0A0C4DH39 117 aa10.58□□□□□ -0.72
LRPAP1-201ENST00000296325 C9orf116Q5BN46 136 aaPredicted RBP10.58□□□□□ -0.72
LRPAP1-201ENST00000296325 LOC107984640A0A0U1RRK4 108 aa10.57□□□□□ -0.72
LRPAP1-201ENST00000296325 GAGE2BQ13066 116 aa10.57□□□□□ -0.72
LRPAP1-201ENST00000296325 RASL11AQ6T310 242 aa10.57□□□□□ -0.72
LRPAP1-201ENST00000296325 PHF5AQ7RTV0 110 aaKnown RBP10.57□□□□□ -0.72
LRPAP1-201ENST00000296325 TCEAL7Q9BRU2 100 aa10.57□□□□□ -0.72
LRPAP1-201ENST00000296325 MLST8Q9BVC4 326 aa10.57□□□□□ -0.72
LRPAP1-201ENST00000296325 CTXND1A0A1B0GTU2 59 aa10.56□□□□□ -0.72
LRPAP1-201ENST00000296325 MGPP08493 103 aa10.56□□□□□ -0.72
LRPAP1-201ENST00000296325 COTL1Q14019 142 aa10.56□□□□□ -0.72
LRPAP1-201ENST00000296325 MZT2BQ6NZ67 158 aa10.56□□□□□ -0.72
LRPAP1-201ENST00000296325 NIT2Q9NQR4 276 aa10.56□□□□□ -0.72
LRPAP1-201ENST00000296325 RPL13AP40429 203 aaKnown RBP10.55□□□□□ -0.72
LRPAP1-201ENST00000296325 TRAV1-1A0A0B4J248 108 aa10.54□□□□□ -0.72
LRPAP1-201ENST00000296325 XCL1P47992 114 aa10.54□□□□□ -0.72
LRPAP1-201ENST00000296325 FHITP49789 147 aa10.54□□□□□ -0.72
LRPAP1-201ENST00000296325 KRTAP11-1Q8IUC1 163 aa10.54□□□□□ -0.72
LRPAP1-201ENST00000296325 BCL2P10415 239 aa10.53□□□□□ -0.72
LRPAP1-201ENST00000296325 FGF6P10767 208 aa10.53□□□□□ -0.72
LRPAP1-201ENST00000296325 AKR1C3P42330 323 aa10.53□□□□□ -0.72
LRPAP1-201ENST00000296325 ZNF561-AS1K7EIQ3 104 aa10.52□□□□□ -0.73
LRPAP1-201ENST00000296325 CAMPP49913 170 aa10.52□□□□□ -0.73
LRPAP1-201ENST00000296325 OR5A1Q8NGJ0 315 aa10.52□□□□□ -0.73
LRPAP1-201ENST00000296325 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.51□□□□□ -0.73
LRPAP1-201ENST00000296325 CCL25O15444 150 aa10.51□□□□□ -0.73
LRPAP1-201ENST00000296325 IGLC6P0CF74 106 aa10.51□□□□□ -0.73
LRPAP1-201ENST00000296325 NTF3P20783 257 aa10.51□□□□□ -0.73
LRPAP1-201ENST00000296325 UBE2D1P51668 147 aa10.51□□□□□ -0.73
LRPAP1-201ENST00000296325 MEF2BQ02080 365 aaPredicted RBP10.51□□□□□ -0.73
LRPAP1-201ENST00000296325 AMMECR1LQ6DCA0 310 aa10.51□□□□□ -0.73
LRPAP1-201ENST00000296325 NUP35Q8NFH5 326 aa10.51□□□□□ -0.73
LRPAP1-201ENST00000296325 ENKURQ8TC29 256 aa10.51□□□□□ -0.73
LRPAP1-201ENST00000296325 LINC00959A0A1B0GUT2 108 aa10.5□□□□□ -0.73
LRPAP1-201ENST00000296325 INMT-MINDY4F8WBC2 141 aa10.5□□□□□ -0.73
LRPAP1-201ENST00000296325 H7C423 109 aa10.5□□□□□ -0.73
LRPAP1-201ENST00000296325 APOMO95445 188 aa10.5□□□□□ -0.73
LRPAP1-201ENST00000296325 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.49□□□□□ -0.73
LRPAP1-201ENST00000296325 IGKV2-29A2NJV5 120 aaPredicted RBP10.49□□□□□ -0.73
LRPAP1-201ENST00000296325 RNASEKQ6P5S7 137 aaKnown RBP10.49□□□□□ -0.73
LRPAP1-201ENST00000296325 Q6ZNX1 250 aa10.49□□□□□ -0.73
LRPAP1-201ENST00000296325 ISOC2Q96AB3 205 aa10.49□□□□□ -0.73
LRPAP1-201ENST00000296325 IGLV4-69A0A075B6H9 119 aa10.48□□□□□ -0.73
LRPAP1-201ENST00000296325 SSNA1O43805 119 aa10.48□□□□□ -0.73
LRPAP1-201ENST00000296325 EIF5AP63241 154 aaKnown RBP10.48□□□□□ -0.73
LRPAP1-201ENST00000296325 MARVELD1Q9BSK0 173 aa10.48□□□□□ -0.73
LRPAP1-201ENST00000296325 CARHSP1Q9Y2V2 147 aaKnown RBP10.48□□□□□ -0.73
LRPAP1-201ENST00000296325 A0A087WZ39 114 aa10.47□□□□□ -0.73
LRPAP1-201ENST00000296325 S100A9P06702 114 aaKnown RBP10.47□□□□□ -0.73
LRPAP1-201ENST00000296325 ZNF25P17030 456 aaPredicted RBP10.47□□□□□ -0.73
LRPAP1-201ENST00000296325 CST9LP1Q5W188 147 aa10.47□□□□□ -0.73
LRPAP1-201ENST00000296325 CD164L2Q6UWJ8 174 aa10.47□□□□□ -0.73
LRPAP1-201ENST00000296325 BAGE2Q86Y30 109 aa10.47□□□□□ -0.73
LRPAP1-201ENST00000296325 STOML3Q8TAV4 291 aa10.47□□□□□ -0.73
LRPAP1-201ENST00000296325 MAP1LC3B2A6NCE7 125 aa10.46□□□□□ -0.73
LRPAP1-201ENST00000296325 TSPAN13O95857 204 aa10.46□□□□□ -0.73
LRPAP1-201ENST00000296325 NCR2O95944 276 aa10.46□□□□□ -0.73
LRPAP1-201ENST00000296325 MAP1LC3BQ9GZQ8 125 aa10.46□□□□□ -0.73
LRPAP1-201ENST00000296325 RPL18AQ02543 176 aaKnown RBP10.44□□□□□ -0.74
LRPAP1-201ENST00000296325 RPL7L1Q6DKI1 246 aaKnown RBP10.44□□□□□ -0.74
LRPAP1-201ENST00000296325 TSKUQ8WUA8 353 aa10.44□□□□□ -0.74
LRPAP1-201ENST00000296325 TPPP3Q9BW30 176 aa10.44□□□□□ -0.74
LRPAP1-201ENST00000296325 RPP21Q9H633 154 aaKnown RBP10.44□□□□□ -0.74
LRPAP1-201ENST00000296325 SCO2A0A1W2PP80 73 aa10.43□□□□□ -0.74
LRPAP1-201ENST00000296325 GATD1Q8NB37 220 aa10.43□□□□□ -0.74
LRPAP1-201ENST00000296325 CAMK2N2Q96S95 79 aa10.43□□□□□ -0.74
LRPAP1-201ENST00000296325 APCSP02743 223 aa10.42□□□□□ -0.74
LRPAP1-201ENST00000296325 TRGC1P0CF51 173 aa10.42□□□□□ -0.74
LRPAP1-201ENST00000296325 C2orf48Q96LS8 159 aa10.42□□□□□ -0.74
LRPAP1-201ENST00000296325 FAM168BA1KXE4 195 aa10.41□□□□□ -0.74
LRPAP1-201ENST00000296325 PAGE4O60829 102 aa10.41□□□□□ -0.74
LRPAP1-201ENST00000296325 SS18Q15532 418 aa10.41□□□□□ -0.74
LRPAP1-201ENST00000296325 BCL2L11O43521 198 aa10.4□□□□□ -0.74
LRPAP1-201ENST00000296325 IFITM3Q01628 133 aa10.4□□□□□ -0.74
LRPAP1-201ENST00000296325 RNF151Q2KHN1 245 aa10.4□□□□□ -0.74
LRPAP1-201ENST00000296325 AKR1C8PQ5T2L2 129 aa10.4□□□□□ -0.74
LRPAP1-201ENST00000296325 EIF5AL1Q6IS14 154 aaKnown RBP10.4□□□□□ -0.74
LRPAP1-201ENST00000296325 KRTAP7-1Q8IUC3 87 aa10.4□□□□□ -0.74
LRPAP1-201ENST00000296325 OPRPNQ99935 248 aaPredicted RBP10.4□□□□□ -0.74
LRPAP1-201ENST00000296325 F2Z2F3 143 aa10.39□□□□□ -0.75
LRPAP1-201ENST00000296325 ESDP10768 282 aa10.39□□□□□ -0.75
LRPAP1-201ENST00000296325 TPRXLQ17RH7 258 aa10.39□□□□□ -0.75
LRPAP1-201ENST00000296325 OR2D3Q8NGH3 330 aa10.39□□□□□ -0.75
LRPAP1-201ENST00000296325 BTF3L4Q96K17 158 aa10.39□□□□□ -0.75
LRPAP1-201ENST00000296325 CDC42SE2Q9NRR3 84 aa10.39□□□□□ -0.75
LRPAP1-201ENST00000296325 UPK1BO75841 260 aa10.38□□□□□ -0.75
LRPAP1-201ENST00000296325 RPS20P60866 119 aaKnown RBP10.38□□□□□ -0.75
LRPAP1-201ENST00000296325 RPL39LQ96EH5 51 aaKnown RBP10.38□□□□□ -0.75
LRPAP1-201ENST00000296325 TMEM101Q96IK0 257 aa10.38□□□□□ -0.75
LRPAP1-201ENST00000296325 BORCS7-ASMTA0A0B4J1R7 106 aa10.37□□□□□ -0.75
LRPAP1-201ENST00000296325 C19orf71A6NCJ1 209 aa10.37□□□□□ -0.75
LRPAP1-201ENST00000296325 LYZL1Q6UWQ5 148 aa10.37□□□□□ -0.75
LRPAP1-201ENST00000296325 MRPL52Q86TS9 123 aaKnown RBP10.37□□□□□ -0.75
LRPAP1-201ENST00000296325 SDHAF1A6NFY7 115 aa10.36□□□□□ -0.75
LRPAP1-201ENST00000296325 COX7A2LO14548 114 aa10.36□□□□□ -0.75
LRPAP1-201ENST00000296325 MALP21145 153 aa10.36□□□□□ -0.75
LRPAP1-201ENST00000296325 Q5BKY6 102 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms