RNA–Protein interactions for RNA: ENST00000287538.9

ZIC3-201, Transcript of Zic family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIC3, Length 3,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3-201ENST00000287538 SMIM2Q9BVW6 85 aa9.59□□□□□ -0.87
ZIC3-201ENST00000287538 A0A087WWL8 130 aa9.59□□□□□ -0.87
ZIC3-201ENST00000287538 TRAV21A0A0B4J279 112 aa9.59□□□□□ -0.87
ZIC3-201ENST00000287538 JPT2Q9H910 190 aa9.59□□□□□ -0.87
ZIC3-201ENST00000287538 C9orf47Q6ZRZ4 202 aa9.59□□□□□ -0.87
ZIC3-201ENST00000287538 RASL10AQ92737 203 aa9.59□□□□□ -0.87
ZIC3-201ENST00000287538 H7C2G1 150 aa9.58□□□□□ -0.88
ZIC3-201ENST00000287538 CFC1BP0CG36 223 aa9.58□□□□□ -0.88
ZIC3-201ENST00000287538 CFC1P0CG37 223 aa9.58□□□□□ -0.88
ZIC3-201ENST00000287538 CD28P10747 220 aa9.58□□□□□ -0.88
ZIC3-201ENST00000287538 ASIPP42127 132 aa9.58□□□□□ -0.88
ZIC3-201ENST00000287538 EMP1P54849 157 aa9.58□□□□□ -0.88
ZIC3-201ENST00000287538 RAX2Q96IS3 184 aa9.58□□□□□ -0.88
ZIC3-201ENST00000287538 HIVEP1P15822 2718 aa9.58□□□□□ -0.88
ZIC3-201ENST00000287538 TRPT1Q86TN4 253 aaKnown RBP9.58□□□□□ -0.88
ZIC3-201ENST00000287538 BAALCQ8WXS3 180 aa9.58□□□□□ -0.88
ZIC3-201ENST00000287538 UBE2E2Q96LR5 201 aa9.58□□□□□ -0.88
ZIC3-201ENST00000287538 ORMDL2Q53FV1 153 aa9.58□□□□□ -0.88
ZIC3-201ENST00000287538 C10orf126Q8N4M7 172 aa9.58□□□□□ -0.88
ZIC3-201ENST00000287538 ZFAND2AQ8N6M9 145 aa9.58□□□□□ -0.88
ZIC3-201ENST00000287538 IGHV3-73A0A0B4J1V6 119 aa9.57□□□□□ -0.88
ZIC3-201ENST00000287538 TMEM61Q8N0U2 210 aa9.57□□□□□ -0.88
ZIC3-201ENST00000287538 TOMM6Q96B49 74 aa9.57□□□□□ -0.88
ZIC3-201ENST00000287538 CITED2Q99967 270 aaPredicted RBP9.57□□□□□ -0.88
ZIC3-201ENST00000287538 C2orf66Q6UXQ4 117 aa9.57□□□□□ -0.88
ZIC3-201ENST00000287538 NTN5Q8WTR8 489 aaPredicted RBP9.57□□□□□ -0.88
ZIC3-201ENST00000287538 A0A0J9YY99 117 aa9.56□□□□□ -0.88
ZIC3-201ENST00000287538 RBAKDNA6NC62 111 aa9.56□□□□□ -0.88
ZIC3-201ENST00000287538 PRO1854Q9UHT4 67 aa9.56□□□□□ -0.88
ZIC3-201ENST00000287538 DCANP1Q8TF63 244 aa9.56□□□□□ -0.88
ZIC3-201ENST00000287538 SUMO2P61956 95 aaKnown RBP9.55□□□□□ -0.88
ZIC3-201ENST00000287538 RPL39LQ96EH5 51 aaKnown RBP9.55□□□□□ -0.88
ZIC3-201ENST00000287538 SOCS3O14543 225 aa9.55□□□□□ -0.88
ZIC3-201ENST00000287538 FSHBP01225 129 aa9.55□□□□□ -0.88
ZIC3-201ENST00000287538 Q8N1Y9 231 aa9.54□□□□□ -0.88
ZIC3-201ENST00000287538 IGHV3-30P01768 117 aa9.54□□□□□ -0.88
ZIC3-201ENST00000287538 IGHV3-30-5P0DP03 117 aa9.54□□□□□ -0.88
ZIC3-201ENST00000287538 HERVK_113P61574 105 aa9.54□□□□□ -0.88
ZIC3-201ENST00000287538 C11orf86A6NJI1 115 aa9.54□□□□□ -0.88
ZIC3-201ENST00000287538 K7EMT4 169 aa9.54□□□□□ -0.88
ZIC3-201ENST00000287538 C15orf53Q8NAA6 179 aa9.54□□□□□ -0.88
ZIC3-201ENST00000287538 MDFICQ9P1T7 246 aa9.54□□□□□ -0.88
ZIC3-201ENST00000287538 TRAV8-4A0A0B4J246 113 aa9.53□□□□□ -0.88
ZIC3-201ENST00000287538 MEIG1Q5JSS6 88 aa9.53□□□□□ -0.88
ZIC3-201ENST00000287538 C3orf56Q8N813 242 aa9.53□□□□□ -0.88
ZIC3-201ENST00000287538 XCL2Q9UBD3 114 aa9.53□□□□□ -0.88
ZIC3-201ENST00000287538 BRI3O95415 125 aa9.52□□□□□ -0.88
ZIC3-201ENST00000287538 Q1RN00 199 aa9.52□□□□□ -0.88
ZIC3-201ENST00000287538 MRPL53Q96EL3 112 aaKnown RBP9.52□□□□□ -0.88
ZIC3-201ENST00000287538 KLK9Q2XQG4 91 aa9.52□□□□□ -0.89
ZIC3-201ENST00000287538 TEX49A0A1B0GTD5 131 aa9.52□□□□□ -0.89
ZIC3-201ENST00000287538 DUSP14O95147 198 aaKnown RBP9.52□□□□□ -0.89
ZIC3-201ENST00000287538 TMEM170BQ5T4T1 132 aa9.52□□□□□ -0.89
ZIC3-201ENST00000287538 PEMTQ9UBM1 199 aa9.52□□□□□ -0.89
ZIC3-201ENST00000287538 MUC4Q99102 2169 aa9.52□□□□□ -0.89
ZIC3-201ENST00000287538 CCL24O00175 119 aa9.51□□□□□ -0.89
ZIC3-201ENST00000287538 INAFM1C9JVW0 142 aa9.51□□□□□ -0.89
ZIC3-201ENST00000287538 K7EQG2 157 aa9.51□□□□□ -0.89
ZIC3-201ENST00000287538 TSPEAR-AS2P59090 65 aa9.51□□□□□ -0.89
ZIC3-201ENST00000287538 ZNF56Q15929 161 aa9.51□□□□□ -0.89
ZIC3-201ENST00000287538 ZNF256Q9Y2P7 627 aaPredicted RBP9.51□□□□□ -0.89
ZIC3-201ENST00000287538 A4D1N5 150 aa9.51□□□□□ -0.89
ZIC3-201ENST00000287538 SLC25A29Q8N8R3 303 aa9.51□□□□□ -0.89
ZIC3-201ENST00000287538 ODF3Q96PU9 254 aa9.51□□□□□ -0.89
ZIC3-201ENST00000287538 A0A0J9YX75 114 aa9.5□□□□□ -0.89
ZIC3-201ENST00000287538 LINC01006Q8NI28 216 aa9.5□□□□□ -0.89
ZIC3-201ENST00000287538 NSD1Q96L73 2696 aaPredicted RBP9.5□□□□□ -0.89
ZIC3-201ENST00000287538 LY6G6DO95868 133 aa9.5□□□□□ -0.89
ZIC3-201ENST00000287538 CRYGDP07320 174 aa9.5□□□□□ -0.89
ZIC3-201ENST00000287538 Q6Q795 121 aa9.5□□□□□ -0.89
ZIC3-201ENST00000287538 LINC01587Q99440 93 aa9.5□□□□□ -0.89
ZIC3-201ENST00000287538 TNFRSF18Q9Y5U5 241 aa9.49□□□□□ -0.89
ZIC3-201ENST00000287538 MAST4O15021 2626 aa9.49□□□□□ -0.89
ZIC3-201ENST00000287538 IGLV4-69A0A075B6H9 119 aa9.49□□□□□ -0.89
ZIC3-201ENST00000287538 IGHV3-33P01772 117 aa9.49□□□□□ -0.89
ZIC3-201ENST00000287538 WFDC10AQ9H1F0 79 aa9.49□□□□□ -0.89
ZIC3-201ENST00000287538 VWFP04275 2813 aa9.49□□□□□ -0.89
ZIC3-201ENST00000287538 TRAV2A0A0B4J234 112 aa9.48□□□□□ -0.89
ZIC3-201ENST00000287538 RPL35AP18077 110 aaKnown RBP9.48□□□□□ -0.89
ZIC3-201ENST00000287538 LINC01620Q4KN68 170 aa9.48□□□□□ -0.89
ZIC3-201ENST00000287538 IGHV4-4A0A075B6R2 117 aa9.48□□□□□ -0.89
ZIC3-201ENST00000287538 LGALS3P17931 250 aaKnown RBP9.48□□□□□ -0.89
ZIC3-201ENST00000287538 ZNF876PQ49A33 203 aa9.48□□□□□ -0.89
ZIC3-201ENST00000287538 RNASE3P12724 160 aaKnown RBP9.48□□□□□ -0.89
ZIC3-201ENST00000287538 ATXN8Q156A1 80 aa9.48□□□□□ -0.89
ZIC3-201ENST00000287538 TP53TG1Q9Y2A0 90 aa9.48□□□□□ -0.89
ZIC3-201ENST00000287538 EIF4EBP3O60516 100 aaPredicted RBP9.47□□□□□ -0.89
ZIC3-201ENST00000287538 C4orf3Q8WVX3 66 aa9.47□□□□□ -0.89
ZIC3-201ENST00000287538 CHCHD5Q9BSY4 110 aa9.47□□□□□ -0.89
ZIC3-201ENST00000287538 DPH3P1Q9H4G8 78 aa9.47□□□□□ -0.89
ZIC3-201ENST00000287538 TENM1Q9UKZ4 2725 aa9.47□□□□□ -0.89
ZIC3-201ENST00000287538 IGHV3-16A0A0C4DH30 117 aa9.47□□□□□ -0.89
ZIC3-201ENST00000287538 H3BMM0 161 aa9.47□□□□□ -0.89
ZIC3-201ENST00000287538 J3QQQ9 107 aa9.47□□□□□ -0.89
ZIC3-201ENST00000287538 KRTAP1-1Q07627 177 aa9.47□□□□□ -0.89
ZIC3-201ENST00000287538 PAPPA-AS1Q5QFB9 102 aa9.47□□□□□ -0.89
ZIC3-201ENST00000287538 UBE2WQ96B02 151 aa9.47□□□□□ -0.89
ZIC3-201ENST00000287538 M0QXV9 152 aa9.46□□□□□ -0.89
ZIC3-201ENST00000287538 TSHBP01222 138 aa9.46□□□□□ -0.89
ZIC3-201ENST00000287538 TMEM89A2RUT3 159 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms