RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 SNRPEP62304 92 aaKnown RBP6.77□□□□□ -1.33
SNRNP40-201ENST00000263694 FA2HQ7L5A8 372 aa6.77□□□□□ -1.33
SNRNP40-201ENST00000263694 FAM19A2Q8N3H0 131 aa6.77□□□□□ -1.33
SNRNP40-201ENST00000263694 DNAH7Q8WXX0 4024 aa6.77□□□□□ -1.33
SNRNP40-201ENST00000263694 CSMD3Q7Z407 3707 aa6.76□□□□□ -1.33
SNRNP40-201ENST00000263694 TRBV27A0A0K0K1C4 114 aa6.76□□□□□ -1.33
SNRNP40-201ENST00000263694 IGLL5B9A064 214 aa6.76□□□□□ -1.33
SNRNP40-201ENST00000263694 I3L3M4 83 aa6.76□□□□□ -1.33
SNRNP40-201ENST00000263694 TSHBP01222 138 aa6.76□□□□□ -1.33
SNRNP40-201ENST00000263694 NTM-AS1Q6ZSK4 140 aa6.76□□□□□ -1.33
SNRNP40-201ENST00000263694 NXT2Q9NPJ8 142 aaKnown RBP6.76□□□□□ -1.33
SNRNP40-201ENST00000263694 S100A6P06703 90 aa6.75□□□□□ -1.33
SNRNP40-201ENST00000263694 RPL32P62910 135 aaKnown RBP6.75□□□□□ -1.33
SNRNP40-201ENST00000263694 COA6Q5JTJ3 125 aaKnown RBP6.75□□□□□ -1.33
SNRNP40-201ENST00000263694 ATP6V0E2Q8NHE4 81 aa6.75□□□□□ -1.33
SNRNP40-201ENST00000263694 KRTAP9-9Q9BYP9 154 aa6.75□□□□□ -1.33
SNRNP40-201ENST00000263694 KRTAP9-4Q9BYQ2 154 aa6.75□□□□□ -1.33
SNRNP40-201ENST00000263694 ICOSQ9Y6W8 199 aa6.75□□□□□ -1.33
SNRNP40-201ENST00000263694 FCER1GP30273 86 aa6.74□□□□□ -1.33
SNRNP40-201ENST00000263694 LAGE3Q14657 143 aa6.74□□□□□ -1.33
SNRNP40-201ENST00000263694 MRPL23Q16540 153 aaKnown RBP6.74□□□□□ -1.33
SNRNP40-201ENST00000263694 KIR2DL4Q99706 377 aa6.74□□□□□ -1.33
SNRNP40-201ENST00000263694 AP5S1Q9NUS5 200 aa6.74□□□□□ -1.33
SNRNP40-201ENST00000263694 A0A096LNJ9 63 aa6.74□□□□□ -1.33
SNRNP40-201ENST00000263694 LINC01546A6NGU7 62 aa6.74□□□□□ -1.33
SNRNP40-201ENST00000263694 C5orf52A6NGY3 159 aa6.74□□□□□ -1.33
SNRNP40-201ENST00000263694 COTL1Q14019 142 aa6.74□□□□□ -1.33
SNRNP40-201ENST00000263694 ZFAND6Q6FIF0 208 aa6.74□□□□□ -1.33
SNRNP40-201ENST00000263694 DAZ4Q86SG3 579 aaKnown RBP6.74□□□□□ -1.33
SNRNP40-201ENST00000263694 DAZ3Q9NR90 486 aaKnown RBP6.74□□□□□ -1.33
SNRNP40-201ENST00000263694 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.73□□□□□ -1.33
SNRNP40-201ENST00000263694 IGHV1-24A0A0C4DH33 117 aa6.73□□□□□ -1.33
SNRNP40-201ENST00000263694 IGKV2-29A2NJV5 120 aaPredicted RBP6.73□□□□□ -1.33
SNRNP40-201ENST00000263694 HSBP1O75506 76 aa6.73□□□□□ -1.33
SNRNP40-201ENST00000263694 BTF3P20290 206 aaKnown RBP6.73□□□□□ -1.33
SNRNP40-201ENST00000263694 RPL39P62891 51 aaKnown RBP6.73□□□□□ -1.33
SNRNP40-201ENST00000263694 CHCHD1Q96BP2 118 aaKnown RBP6.73□□□□□ -1.33
SNRNP40-201ENST00000263694 CHCHD7Q9BUK0 85 aa6.73□□□□□ -1.33
SNRNP40-201ENST00000263694 IFITM10A6NMD0 228 aa6.72□□□□□ -1.33
SNRNP40-201ENST00000263694 H3BNG1 76 aa6.72□□□□□ -1.33
SNRNP40-201ENST00000263694 ESDP10768 282 aa6.72□□□□□ -1.33
SNRNP40-201ENST00000263694 FABP4P15090 132 aa6.72□□□□□ -1.33
SNRNP40-201ENST00000263694 CEMP1Q6PRD7 247 aaPredicted RBP6.72□□□□□ -1.33
SNRNP40-201ENST00000263694 LYPD5Q6UWN5 251 aa6.72□□□□□ -1.33
SNRNP40-201ENST00000263694 LINC00173Q6ZV60 143 aa6.72□□□□□ -1.33
SNRNP40-201ENST00000263694 HIST3H2BBQ8N257 126 aa6.72□□□□□ -1.33
SNRNP40-201ENST00000263694 GTSF1LQ9H1H1 148 aa6.72□□□□□ -1.33
SNRNP40-201ENST00000263694 DYNC2H1Q8NCM8 4307 aaKnown RBP6.72□□□□□ -1.33
SNRNP40-201ENST00000263694 TENM2Q9NT68 2774 aa6.71□□□□□ -1.33
SNRNP40-201ENST00000263694 TRBV6-8A0A0A6YYG3 113 aa6.71□□□□□ -1.34
SNRNP40-201ENST00000263694 KRTAP4-8A0A0G2JLE6 195 aa6.71□□□□□ -1.34
SNRNP40-201ENST00000263694 AMTP48728 403 aa6.71□□□□□ -1.34
SNRNP40-201ENST00000263694 ESRGQ1W209 222 aa6.71□□□□□ -1.34
SNRNP40-201ENST00000263694 ORMDL2Q53FV1 153 aa6.71□□□□□ -1.34
SNRNP40-201ENST00000263694 C2orf66Q6UXQ4 117 aa6.7□□□□□ -1.34
SNRNP40-201ENST00000263694 GAGE6Q13070 117 aa6.69□□□□□ -1.34
SNRNP40-201ENST00000263694 C15orf53Q8NAA6 179 aa6.69□□□□□ -1.34
SNRNP40-201ENST00000263694 C20orf203Q8NBC4 194 aa6.69□□□□□ -1.34
SNRNP40-201ENST00000263694 OPRPNQ99935 248 aaPredicted RBP6.69□□□□□ -1.34
SNRNP40-201ENST00000263694 APLNQ9ULZ1 77 aa6.69□□□□□ -1.34
SNRNP40-201ENST00000263694 TRBV25-1A0A075B6N4 114 aa6.69□□□□□ -1.34
SNRNP40-201ENST00000263694 K7EMI3 77 aa6.69□□□□□ -1.34
SNRNP40-201ENST00000263694 HBDP02042 147 aa6.69□□□□□ -1.34
SNRNP40-201ENST00000263694 S100A2P29034 98 aa6.69□□□□□ -1.34
SNRNP40-201ENST00000263694 MUC7Q8TAX7 377 aa6.69□□□□□ -1.34
SNRNP40-201ENST00000263694 TOMM6Q96B49 74 aa6.69□□□□□ -1.34
SNRNP40-201ENST00000263694 HIST1H2BLQ99880 126 aa6.69□□□□□ -1.34
SNRNP40-201ENST00000263694 CHCHD5Q9BSY4 110 aa6.69□□□□□ -1.34
SNRNP40-201ENST00000263694 TMEM243Q9BU79 118 aa6.69□□□□□ -1.34
SNRNP40-201ENST00000263694 NUPR2A6NF83 97 aa6.68□□□□□ -1.34
SNRNP40-201ENST00000263694 ZC2HC1BQ5TFG8 222 aa6.68□□□□□ -1.34
SNRNP40-201ENST00000263694 SH2D6Q7Z4S9 175 aa6.68□□□□□ -1.34
SNRNP40-201ENST00000263694 KRTAP19-1Q8IUB9 90 aa6.68□□□□□ -1.34
SNRNP40-201ENST00000263694 WWC2-AS2Q96NR7 200 aa6.68□□□□□ -1.34
SNRNP40-201ENST00000263694 CYSLTR1Q9Y271 337 aa6.68□□□□□ -1.34
SNRNP40-201ENST00000263694 STARD9Q9P2P6 4700 aa6.67□□□□□ -1.34
SNRNP40-201ENST00000263694 TMEM262E9PQX1 116 aa6.67□□□□□ -1.34
SNRNP40-201ENST00000263694 LEPROTL1O95214 131 aa6.67□□□□□ -1.34
SNRNP40-201ENST00000263694 RNASE13Q5GAN3 156 aaKnown RBP6.67□□□□□ -1.34
SNRNP40-201ENST00000263694 LELP1Q5T871 98 aa6.67□□□□□ -1.34
SNRNP40-201ENST00000263694 WFDC10BQ8IUB3 73 aa6.67□□□□□ -1.34
SNRNP40-201ENST00000263694 SCGB3A1Q96QR1 104 aa6.67□□□□□ -1.34
SNRNP40-201ENST00000263694 KLK5Q9Y337 293 aaPredicted RBP6.67□□□□□ -1.34
SNRNP40-201ENST00000263694 LINC00588Q9Y4M8 146 aa6.67□□□□□ -1.34
SNRNP40-201ENST00000263694 LYSTQ99698 3801 aa6.67□□□□□ -1.34
SNRNP40-201ENST00000263694 UBE2L6O14933 153 aa6.66□□□□□ -1.34
SNRNP40-201ENST00000263694 FGF6P10767 208 aa6.66□□□□□ -1.34
SNRNP40-201ENST00000263694 TMEM97Q5BJF2 176 aa6.66□□□□□ -1.34
SNRNP40-201ENST00000263694 Q8N976 141 aa6.66□□□□□ -1.34
SNRNP40-201ENST00000263694 FAM104AQ969W3 186 aa6.66□□□□□ -1.34
SNRNP40-201ENST00000263694 TMEM18Q96B42 140 aa6.66□□□□□ -1.34
SNRNP40-201ENST00000263694 UBE2D4Q9Y2X8 147 aa6.66□□□□□ -1.34
SNRNP40-201ENST00000263694 IGLV4-60A0A075B6I1 120 aa6.65□□□□□ -1.34
SNRNP40-201ENST00000263694 IGIPA6NJ69 53 aa6.65□□□□□ -1.34
SNRNP40-201ENST00000263694 H0Y8G0 127 aa6.65□□□□□ -1.34
SNRNP40-201ENST00000263694 MPV17L2Q567V2 206 aa6.65□□□□□ -1.34
SNRNP40-201ENST00000263694 PLECQ15149 4684 aaKnown RBP6.65□□□□□ -1.35
SNRNP40-201ENST00000263694 LOC105371267A0A1B0GV96 52 aa6.65□□□□□ -1.35
SNRNP40-201ENST00000263694 TIRAPP58753 221 aa6.65□□□□□ -1.35
SNRNP40-201ENST00000263694 AMMECR1LQ6DCA0 310 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms